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The map label for this gene is ybaB [C]

Identifier: 114797665

GI number: 114797665

Start: 361108

End: 361431

Strand: Reverse

Name: ybaB [C]

Synonym: HNE_0371

Alternate gene names: 114797665

Gene position: 361431-361108 (Counterclockwise)

Preceding gene: 114798398

Following gene: 114799985

Centisome position: 9.76

GC content: 62.35

Gene sequence:

>324_bases
ATGAAAGACCTCGCCCAGATCATGCAGCAAGCCCAGGCCATGCAGGCCAAGATGGCGGAAGTGCAGCAGAAAATCGAGAA
TACCGAAGCCGACGGCGTTGCCGGGGCCGGCCTTGTGCGCGTGAAGCTGCGCGGCAAGGGCGAGCTGATCTCGGTAACCA
TCGACAAAAGCCTGATGGGGGACGATCCGGAGATCGTGGAAGACCTGATCAAGGCAGCCCATTCGGACGCGCGCAAGCGG
CTGGACCAGGCGATGGAAGACGCGATGAAGACGGCCACGGCCGGGTTTGGCGGGATGCTGCCGGGGTTCAAGCTGCCGTT
TTAG

Upstream 100 bases:

>100_bases
CCGCCTGAACTGCTTGAAATGGAGGGCGGCGAGGGCGATGTGACCAGCAACGTTATACCCTTGAAAACCCGCCGGCCGGC
CTGACGGAGACCCGATCACC

Downstream 100 bases:

>100_bases
GGAAGAGGGAAGGCCCTCACCTCCCATCGCTTTGCGATGGGCCCCTCCTCTCCCGCTGAGCGGGAGAGGAGTAAGCCCGG
GCCGGGATGACATACCCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MKDLAQIMQQAQAMQAKMAEVQQKIENTEADGVAGAGLVRVKLRGKGELISVTIDKSLMGDDPEIVEDLIKAAHSDARKR
LDQAMEDAMKTATAGFGGMLPGFKLPF

Sequences:

>Translated_107_residues
MKDLAQIMQQAQAMQAKMAEVQQKIENTEADGVAGAGLVRVKLRGKGELISVTIDKSLMGDDPEIVEDLIKAAHSDARKR
LDQAMEDAMKTATAGFGGMLPGFKLPF
>Mature_107_residues
MKDLAQIMQQAQAMQAKMAEVQQKIENTEADGVAGAGLVRVKLRGKGELISVTIDKSLMGDDPEIVEDLIKAAHSDARKR
LDQAMEDAMKTATAGFGGMLPGFKLPF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=104, Percent_Identity=42.3076923076923, Blast_Score=87, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y371_HYPNA (Q0C592)

Other databases:

- EMBL:   CP000158
- RefSeq:   YP_759101.1
- ProteinModelPortal:   Q0C592
- SMR:   Q0C592
- STRING:   Q0C592
- GeneID:   4288143
- GenomeReviews:   CP000158_GR
- KEGG:   hne:HNE_0371
- NMPDR:   fig|228405.5.peg.365
- TIGR:   HNE_0371
- eggNOG:   COG0718
- HOGENOM:   HBG734215
- OMA:   IVTAYTE
- ProtClustDB:   CLSK2531698
- BioCyc:   HNEP81032:HNE_0371-MONOMER
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 11518; Mature: 11518

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.5 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDLAQIMQQAQAMQAKMAEVQQKIENTEADGVAGAGLVRVKLRGKGELISVTIDKSLMG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEECCHHCC
DDPEIVEDLIKAAHSDARKRLDQAMEDAMKTATAGFGGMLPGFKLPF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKDLAQIMQQAQAMQAKMAEVQQKIENTEADGVAGAGLVRVKLRGKGELISVTIDKSLMG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEECCHHCC
DDPEIVEDLIKAAHSDARKRLDQAMEDAMKTATAGFGGMLPGFKLPF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA