| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797642
Identifier: 114797642
GI number: 114797642
Start: 1221758
End: 1222756
Strand: Reverse
Name: 114797642
Synonym: HNE_1203
Alternate gene names: NA
Gene position: 1222756-1221758 (Counterclockwise)
Preceding gene: 114798248
Following gene: 114799683
Centisome position: 33.0
GC content: 59.76
Gene sequence:
>999_bases GTGAGCGGCGACCTTCTCAAATCCTACCGCTTCCGCGAGGAACGCCAGGCCGACTGGCAGAAGCTGGACCTGATCCTGAC GCGGGCAGAAAATGGCGGCGTGAAAAGTCTGAGCGATGAGCAGATGCTGGCGCTGCCCCGGCTTTATCGGCAGGCCGTCT CTTCCCTCTCCGTGGCCCGCTCGATCTCGCTCGACCAGAACGTGATTGCGTATCTCGAGAGCCTGTGCACGCGCGCCTAT TTCTTTGTTTATGGCGCCCGCACGACGATCGGCGAGCGGATGATGACCTTCCTGCGCAAGGACTGGCCCGCTGCCGTGCG CGGGGCGGTGTGGCCAACACTTTTGTCTGCCCTGTTCTTCTTCGGCGGATGGGGCCTCGCCTTCTTTCTGTGCCTGCAGG ATATGGACTGGTACTGGACCTTCCACGGACAAAGCTTTTTTGAAGGGCGCAATCCGGAAGCCACGGTCGAGTATCTGCGA AGTACGATCTACACGGATGGGCATGGCGACGGGCAATTGACGGCCTTTTCCAGCTTCCTGTTCAACAACAACGCCCAGAT CGCGCTGTTCGCGTTTGCGCTCGGCTTTGCGTTCGGTATCCCGACCGCCTGGCTGCTTGTATATAACGGGGTGATGATCG GCTCGATGTATGCCGTCTTCTGGGACAAGGGGCTGGGTTATGAGTTTACCGGCTGGCTGATGATCCATGGTGTCACAGAG ATATTCGCCATTGTGCTGGCCGGCGCGGCGGGTTTCATCATTGGCGGCGCTGTGGCCTTTCCGGGCGCACAAACACGGCT CGCCTCGGCACGCTCGGCCGGGCAGAAAGCGGCCACCATCGCGATGGGCTGCATTATCATGCTCATTATTGCCGCCATAC TTGAGGGCTTCGGCCGGCAGTTGATCAATTCGGATCTGGTCCGCTACGTGATTGCCGGCACGACCGGCGTTCTCTGGATG GTGTACTTTTACATGTCCCGGCAGGAACGCAGCGTATGA
Upstream 100 bases:
>100_bases GGCTGCAACGGATGGGGGTCCAGATCATTGAGAGCCGGCCCGAACATTTCGGCGCGGAGCTTGTTTCCCGTTACCTTCAG ATCAAACAGAGGGACATGCT
Downstream 100 bases:
>100_bases CCAGACCCGCCGCGCCCCTGCCCACCAAAGCCAAACGCCTGCCCGTCAGCCTTGAGGCGGCGACGCAGCGGCGCGCGCGT ATGGCAGAAGAGATACGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MSGDLLKSYRFREERQADWQKLDLILTRAENGGVKSLSDEQMLALPRLYRQAVSSLSVARSISLDQNVIAYLESLCTRAY FFVYGARTTIGERMMTFLRKDWPAAVRGAVWPTLLSALFFFGGWGLAFFLCLQDMDWYWTFHGQSFFEGRNPEATVEYLR STIYTDGHGDGQLTAFSSFLFNNNAQIALFAFALGFAFGIPTAWLLVYNGVMIGSMYAVFWDKGLGYEFTGWLMIHGVTE IFAIVLAGAAGFIIGGAVAFPGAQTRLASARSAGQKAATIAMGCIIMLIIAAILEGFGRQLINSDLVRYVIAGTTGVLWM VYFYMSRQERSV
Sequences:
>Translated_332_residues MSGDLLKSYRFREERQADWQKLDLILTRAENGGVKSLSDEQMLALPRLYRQAVSSLSVARSISLDQNVIAYLESLCTRAY FFVYGARTTIGERMMTFLRKDWPAAVRGAVWPTLLSALFFFGGWGLAFFLCLQDMDWYWTFHGQSFFEGRNPEATVEYLR STIYTDGHGDGQLTAFSSFLFNNNAQIALFAFALGFAFGIPTAWLLVYNGVMIGSMYAVFWDKGLGYEFTGWLMIHGVTE IFAIVLAGAAGFIIGGAVAFPGAQTRLASARSAGQKAATIAMGCIIMLIIAAILEGFGRQLINSDLVRYVIAGTTGVLWM VYFYMSRQERSV >Mature_331_residues SGDLLKSYRFREERQADWQKLDLILTRAENGGVKSLSDEQMLALPRLYRQAVSSLSVARSISLDQNVIAYLESLCTRAYF FVYGARTTIGERMMTFLRKDWPAAVRGAVWPTLLSALFFFGGWGLAFFLCLQDMDWYWTFHGQSFFEGRNPEATVEYLRS TIYTDGHGDGQLTAFSSFLFNNNAQIALFAFALGFAFGIPTAWLLVYNGVMIGSMYAVFWDKGLGYEFTGWLMIHGVTEI FAIVLAGAAGFIIGGAVAFPGAQTRLASARSAGQKAATIAMGCIIMLIIAAILEGFGRQLINSDLVRYVIAGTTGVLWMV YFYMSRQERSV
Specific function: Unknown
COG id: COG1300
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36966; Mature: 36835
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGDLLKSYRFREERQADWQKLDLILTRAENGGVKSLSDEQMLALPRLYRQAVSSLSVAR CCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SISLDQNVIAYLESLCTRAYFFVYGARTTIGERMMTFLRKDWPAAVRGAVWPTLLSALFF HCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH FGGWGLAFFLCLQDMDWYWTFHGQSFFEGRNPEATVEYLRSTIYTDGHGDGQLTAFSSFL HHHHHHHHHHHHHCCCEEEEECCCHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH FNNNAQIALFAFALGFAFGIPTAWLLVYNGVMIGSMYAVFWDKGLGYEFTGWLMIHGVTE HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHH IFAIVLAGAAGFIIGGAVAFPGAQTRLASARSAGQKAATIAMGCIIMLIIAAILEGFGRQ HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH LINSDLVRYVIAGTTGVLWMVYFYMSRQERSV HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SGDLLKSYRFREERQADWQKLDLILTRAENGGVKSLSDEQMLALPRLYRQAVSSLSVAR CCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SISLDQNVIAYLESLCTRAYFFVYGARTTIGERMMTFLRKDWPAAVRGAVWPTLLSALFF HCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH FGGWGLAFFLCLQDMDWYWTFHGQSFFEGRNPEATVEYLRSTIYTDGHGDGQLTAFSSFL HHHHHHHHHHHHHCCCEEEEECCCHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH FNNNAQIALFAFALGFAFGIPTAWLLVYNGVMIGSMYAVFWDKGLGYEFTGWLMIHGVTE HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHH IFAIVLAGAAGFIIGGAVAFPGAQTRLASARSAGQKAATIAMGCIIMLIIAAILEGFGRQ HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH LINSDLVRYVIAGTTGVLWMVYFYMSRQERSV HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA