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The map label for this gene is 114797588

Identifier: 114797588

GI number: 114797588

Start: 1450991

End: 1452529

Strand: Direct

Name: 114797588

Synonym: HNE_1422

Alternate gene names: NA

Gene position: 1450991-1452529 (Clockwise)

Preceding gene: 114799968

Following gene: 114800534

Centisome position: 39.16

GC content: 61.21

Gene sequence:

>1539_bases
GTGGGGAAACTCAGACTTGTGCTCGGCGACCAGCTGTCGCCGGACATCTCCTCCCTTCGTGACGCATCAAAGAAGGACGA
CGTTATCCTTATCGCTGAGGTGATGGAGGAGGCAACCTACGTCCCCCACCACAAGAAGAAGATCGCCTTCCTCTTCGCCG
CCATGCGCCACTTCGCGCAGGAGCTGAAATCGGCCGGCTACACCGTCCGCTACGCAGCGCTCGACGATCCTCTCAACCAG
GGCTCCCTGCGCGCCGAAACGGCTCGCGCACTCGAAGACCATCCAAGCCTCACGCAAGTCATCGCCACCAAGCCCGGCGA
GTGGCGCCTCCTTCAGGACATGGAGCTATGGGCGGACATCCTTCCCGTACCCGTAGATCTGCGCGAAGACACCCGCTTCA
TCGTACCCCTAAAGGCGTTCAATGCCTGGGCCGAGGGCCGCAAACAGCTGCGCATGGAATACTTCTACCGGGACGTCCGC
CGCCAGACCGGCCTCCTCATGGACGGCGACCAGCCCGAAGGTGGCCAGTGGAACTACGACAGCGAAAATCGCAAACGCCT
GCCCAAATCCATGACCACCCCGCAGCGTTTCCTGCCCAAGCCCGACGCGCTGACACAGGACGTCATCGCCCTCGTTGCCG
AACGCTTCCCGGATAATTTCGGCGATCTCGACCCCTGGGTCTTCGCCACCACCCGCGCGGGCGCTGAAGAGGCGCGCGAT
CACTTCCTCTCGGAAATCCTCCCCGGCTTTGGGGACTGGCAGGACGCCATGGCCAGGGGCGAGCCCTGGATGTGGCACTC
GCTGCTTTCGGTCTACATCAATTGCGGCCTGCTGGACCCGCTGGACGTCTGCCGCCGCGCCGAAGCCGAATGGAAAGCGG
GCAGGGCGCCGCTCAATGCGGTGGAGGGTTTCATCCGTCAGATCATCGGCTGGCGGGAATATGTACGCGGCATCTACTGG
CTGAAGATGCCCGCCTATGCAGAGCTCAATACGCTGAACGCTCATCGTCCGCTCCCGGACTTCTACTGGACCGGCGAGAC
AGACATGCGCTGCATGGCCGAGGCCATTGGCCAGACCAGACGCCATGCCTACGCCCATCACATCCAGCGCCTGATGATCA
CCGGCAACTTCGCGCTCTTGGCCGGGCTTTCCCCGGCGCAGGTCAATGAATGGTATCTGCTGGTCTATGCTGACGCCTAT
GAATGGGTAGAGCTGCCCAACACCCACGGCATGGCGCTGCATGCCGATGGCGGGCTGATGGCGTCCAAGCCCTACGCCGC
CAGCGGCAACTACATTTCCAGGATGTCGGACTATTGCGAGAGCTGTTCCTACGACGTGAAACAGCGCACCGGCGCAAAAG
CATGCCCGTTTAACTTCCTTTATTGGGATTTCATTGATCGGCATCAAGAGCGCTTTAAAAACAACCCCCGGATGGCCATG
ATCTGCAAGTCCCTCGACAGGATGCAGCCTTCAGAGAGGGCCGCCATACGCGCTGAAGCGGAAAAGTTTCTCGACGGTCT
CCGTCTGAAAACCCTGTAA

Upstream 100 bases:

>100_bases
TGATGACCAGGGCCGTTGGGTAAAACTCGCCTTTGAGGCCCGCGGCCAGGAAATCGAATACGTCCTCGACCAGATGTATT
GATAAAACAGGGCGTTGGCG

Downstream 100 bases:

>100_bases
CAATCGCATTTCCACAGGCAGGTCGATGAAATTGCACCGATCTTGGTCGCATGTGCCTAACCCGCTCATGATAACTATTC
TCAGTAGAAACGCGGGGCGC

Product: deoxyribodipyrimidine photolyase-like protein

Products: NA

Alternate protein names: Deoxyribodipyrimidine Photolyase-Like Protein; Photolyase; Deoxyribodipyrimidine Photolyase Family Protein; Deoxyribodipyrimidine Photolyase; Photolyase Protein Family Protein; Deoxyribodipyrimidine Photolyase-Like Protein Protein; Photolyase Family Protein; Cryptochrome/Photolyase; DNA Photolyase; Bcct Transporter; Protein Related Deoxyribodipyrimidine Photolyase; Deoxyribodipyrimidine Photo-Lyase; Cryptochrome/Photolyase-Related; Photolyase Related Protein; BCCT Transporter; Alpha-Deoxyribodipyrimidine Photolyase-Related Protein; Deoxyribodipyrimidine Photolyase Related Protein; A Deoxyribodipyrimidine Photolyase-Like Protein; Deoxyribodipyrimidine Photolyase Homolog

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MGKLRLVLGDQLSPDISSLRDASKKDDVILIAEVMEEATYVPHHKKKIAFLFAAMRHFAQELKSAGYTVRYAALDDPLNQ
GSLRAETARALEDHPSLTQVIATKPGEWRLLQDMELWADILPVPVDLREDTRFIVPLKAFNAWAEGRKQLRMEYFYRDVR
RQTGLLMDGDQPEGGQWNYDSENRKRLPKSMTTPQRFLPKPDALTQDVIALVAERFPDNFGDLDPWVFATTRAGAEEARD
HFLSEILPGFGDWQDAMARGEPWMWHSLLSVYINCGLLDPLDVCRRAEAEWKAGRAPLNAVEGFIRQIIGWREYVRGIYW
LKMPAYAELNTLNAHRPLPDFYWTGETDMRCMAEAIGQTRRHAYAHHIQRLMITGNFALLAGLSPAQVNEWYLLVYADAY
EWVELPNTHGMALHADGGLMASKPYAASGNYISRMSDYCESCSYDVKQRTGAKACPFNFLYWDFIDRHQERFKNNPRMAM
ICKSLDRMQPSERAAIRAEAEKFLDGLRLKTL

Sequences:

>Translated_512_residues
MGKLRLVLGDQLSPDISSLRDASKKDDVILIAEVMEEATYVPHHKKKIAFLFAAMRHFAQELKSAGYTVRYAALDDPLNQ
GSLRAETARALEDHPSLTQVIATKPGEWRLLQDMELWADILPVPVDLREDTRFIVPLKAFNAWAEGRKQLRMEYFYRDVR
RQTGLLMDGDQPEGGQWNYDSENRKRLPKSMTTPQRFLPKPDALTQDVIALVAERFPDNFGDLDPWVFATTRAGAEEARD
HFLSEILPGFGDWQDAMARGEPWMWHSLLSVYINCGLLDPLDVCRRAEAEWKAGRAPLNAVEGFIRQIIGWREYVRGIYW
LKMPAYAELNTLNAHRPLPDFYWTGETDMRCMAEAIGQTRRHAYAHHIQRLMITGNFALLAGLSPAQVNEWYLLVYADAY
EWVELPNTHGMALHADGGLMASKPYAASGNYISRMSDYCESCSYDVKQRTGAKACPFNFLYWDFIDRHQERFKNNPRMAM
ICKSLDRMQPSERAAIRAEAEKFLDGLRLKTL
>Mature_511_residues
GKLRLVLGDQLSPDISSLRDASKKDDVILIAEVMEEATYVPHHKKKIAFLFAAMRHFAQELKSAGYTVRYAALDDPLNQG
SLRAETARALEDHPSLTQVIATKPGEWRLLQDMELWADILPVPVDLREDTRFIVPLKAFNAWAEGRKQLRMEYFYRDVRR
QTGLLMDGDQPEGGQWNYDSENRKRLPKSMTTPQRFLPKPDALTQDVIALVAERFPDNFGDLDPWVFATTRAGAEEARDH
FLSEILPGFGDWQDAMARGEPWMWHSLLSVYINCGLLDPLDVCRRAEAEWKAGRAPLNAVEGFIRQIIGWREYVRGIYWL
KMPAYAELNTLNAHRPLPDFYWTGETDMRCMAEAIGQTRRHAYAHHIQRLMITGNFALLAGLSPAQVNEWYLLVYADAYE
WVELPNTHGMALHADGGLMASKPYAASGNYISRMSDYCESCSYDVKQRTGAKACPFNFLYWDFIDRHQERFKNNPRMAMI
CKSLDRMQPSERAAIRAEAEKFLDGLRLKTL

Specific function: Unknown

COG id: COG3046

COG function: function code R; Uncharacterized protein related to deoxyribodipyrimidine photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58735; Mature: 58604

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKLRLVLGDQLSPDISSLRDASKKDDVILIAEVMEEATYVPHHKKKIAFLFAAMRHFAQ
CCCEEEEECCCCCCCHHHHHCCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ELKSAGYTVRYAALDDPLNQGSLRAETARALEDHPSLTQVIATKPGEWRLLQDMELWADI
HHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCEEEHHHHHHHHHH
LPVPVDLREDTRFIVPLKAFNAWAEGRKQLRMEYFYRDVRRQTGLLMDGDQPEGGQWNYD
CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCC
SENRKRLPKSMTTPQRFLPKPDALTQDVIALVAERFPDNFGDLDPWVFATTRAGAEEARD
CHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHH
HFLSEILPGFGDWQDAMARGEPWMWHSLLSVYINCGLLDPLDVCRRAEAEWKAGRAPLNA
HHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHCCCCCHHH
VEGFIRQIIGWREYVRGIYWLKMPAYAELNTLNAHRPLPDFYWTGETDMRCMAEAIGQTR
HHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHH
RHAYAHHIQRLMITGNFALLAGLSPAQVNEWYLLVYADAYEWVELPNTHGMALHADGGLM
HHHHHHHHHHHHHCCCCHHEECCCCCCCCCEEEEEEECCCHHHCCCCCCCEEEECCCCEE
ASKPYAASGNYISRMSDYCESCSYDVKQRTGAKACPFNFLYWDFIDRHQERFKNNPRMAM
ECCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHH
ICKSLDRMQPSERAAIRAEAEKFLDGLRLKTL
HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GKLRLVLGDQLSPDISSLRDASKKDDVILIAEVMEEATYVPHHKKKIAFLFAAMRHFAQ
CCEEEEECCCCCCCHHHHHCCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ELKSAGYTVRYAALDDPLNQGSLRAETARALEDHPSLTQVIATKPGEWRLLQDMELWADI
HHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCEEEHHHHHHHHHH
LPVPVDLREDTRFIVPLKAFNAWAEGRKQLRMEYFYRDVRRQTGLLMDGDQPEGGQWNYD
CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCC
SENRKRLPKSMTTPQRFLPKPDALTQDVIALVAERFPDNFGDLDPWVFATTRAGAEEARD
CHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHH
HFLSEILPGFGDWQDAMARGEPWMWHSLLSVYINCGLLDPLDVCRRAEAEWKAGRAPLNA
HHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHCCCCCHHH
VEGFIRQIIGWREYVRGIYWLKMPAYAELNTLNAHRPLPDFYWTGETDMRCMAEAIGQTR
HHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHH
RHAYAHHIQRLMITGNFALLAGLSPAQVNEWYLLVYADAYEWVELPNTHGMALHADGGLM
HHHHHHHHHHHHHCCCCHHEECCCCCCCCCEEEEEEECCCHHHCCCCCCCEEEECCCCEE
ASKPYAASGNYISRMSDYCESCSYDVKQRTGAKACPFNFLYWDFIDRHQERFKNNPRMAM
ECCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHH
ICKSLDRMQPSERAAIRAEAEKFLDGLRLKTL
HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA