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The map label for this gene is 114797491

Identifier: 114797491

GI number: 114797491

Start: 2954573

End: 2955232

Strand: Direct

Name: 114797491

Synonym: HNE_2792

Alternate gene names: NA

Gene position: 2954573-2955232 (Clockwise)

Preceding gene: 114798236

Following gene: 114799652

Centisome position: 79.75

GC content: 64.09

Gene sequence:

>660_bases
ATGGGTACTAAACCTGCCGCGGCCCCCGAAGCCCCTCGCGACTGCCCCCTCTGCCCGCGCCTCGTGGCATATCGCGAAGC
CGTGCGCGCCAAAGAGCCCAGCTGGTTCAACGGCGCCGTCCCAAGTTTCGGCAAGGACGATGCGCAGCTCCTCATCGTCG
GCCTCGCGCCCGGCGTTACAGGCGCCAACCGCACCGGCCGTCCGTTCACCGGCGACTGGGCCGGCGATCTCCTCTATGCC
ACCCTCGACAAATTCGGCTTCAGCAAAGGCAAATTCGCCGCCGACCCGAATGACGGCCTCGTCCTCACCGGCGCGATGAT
CACCAACGCCGTGCGCTGCGTGCCCCCGGAAAACAAACCCGTCGGCGCCGAGATCAACCAGTGCCGCCCCTTCCTCGAAG
CGCGCATCGCAGCCCTGCCGAAACTGAAAGTCATCCTGTGCCTGGGTAAGATCAGTCACGATTCCACCCTGCGCGCTCTC
GGCCTGAAAGTCGCCGCCCATCCATTCGGACACGGAACAAAATACGAAGTCGAGGCAAACGGCAAACCCGTCACGCTCCT
CTCCTCCTATCACTGCTCCCGCTACAACACGAACACCGGCCGCCTGACGCCCGAAATGTTCGAAACCGTCTTCGCAGAGG
CCCGCCGCATCCTGAACTAA

Upstream 100 bases:

>100_bases
TGCTGCGAAGCCAATTATGGCGGCTACCAGGCCATCATGCGCGACTTCCGCTCCGGCGCCTGGATCGCCGCCACCGAAAT
GCGCAAAGACGGCAACGCGG

Downstream 100 bases:

>100_bases
TCCGCCCGCACGATCGCCACCATCGTGGTCACCAGATGTTCCAGTGTCGCCGGCCGCGACCAGGTCGGATGCGCCCGGCT
CGTATCAGCCAGCCGCGCCT

Product: uracil-DNA glycosylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MGTKPAAAPEAPRDCPLCPRLVAYREAVRAKEPSWFNGAVPSFGKDDAQLLIVGLAPGVTGANRTGRPFTGDWAGDLLYA
TLDKFGFSKGKFAADPNDGLVLTGAMITNAVRCVPPENKPVGAEINQCRPFLEARIAALPKLKVILCLGKISHDSTLRAL
GLKVAAHPFGHGTKYEVEANGKPVTLLSSYHCSRYNTNTGRLTPEMFETVFAEARRILN

Sequences:

>Translated_219_residues
MGTKPAAAPEAPRDCPLCPRLVAYREAVRAKEPSWFNGAVPSFGKDDAQLLIVGLAPGVTGANRTGRPFTGDWAGDLLYA
TLDKFGFSKGKFAADPNDGLVLTGAMITNAVRCVPPENKPVGAEINQCRPFLEARIAALPKLKVILCLGKISHDSTLRAL
GLKVAAHPFGHGTKYEVEANGKPVTLLSSYHCSRYNTNTGRLTPEMFETVFAEARRILN
>Mature_218_residues
GTKPAAAPEAPRDCPLCPRLVAYREAVRAKEPSWFNGAVPSFGKDDAQLLIVGLAPGVTGANRTGRPFTGDWAGDLLYAT
LDKFGFSKGKFAADPNDGLVLTGAMITNAVRCVPPENKPVGAEINQCRPFLEARIAALPKLKVILCLGKISHDSTLRALG
LKVAAHPFGHGTKYEVEANGKPVTLLSSYHCSRYNTNTGRLTPEMFETVFAEARRILN

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv1259 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 23535; Mature: 23404

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTKPAAAPEAPRDCPLCPRLVAYREAVRAKEPSWFNGAVPSFGKDDAQLLIVGLAPGVT
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
GANRTGRPFTGDWAGDLLYATLDKFGFSKGKFAADPNDGLVLTGAMITNAVRCVPPENKP
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHCCEEECCCCCCC
VGAEINQCRPFLEARIAALPKLKVILCLGKISHDSTLRALGLKVAAHPFGHGTKYEVEAN
CCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHEECCCCCCCEEEEECC
GKPVTLLSSYHCSRYNTNTGRLTPEMFETVFAEARRILN
CCCEEEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GTKPAAAPEAPRDCPLCPRLVAYREAVRAKEPSWFNGAVPSFGKDDAQLLIVGLAPGVT
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
GANRTGRPFTGDWAGDLLYATLDKFGFSKGKFAADPNDGLVLTGAMITNAVRCVPPENKP
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHCCEEECCCCCCC
VGAEINQCRPFLEARIAALPKLKVILCLGKISHDSTLRALGLKVAAHPFGHGTKYEVEAN
CCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHEECCCCCCCEEEEECC
GKPVTLLSSYHCSRYNTNTGRLTPEMFETVFAEARRILN
CCCEEEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]