| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114797487
Identifier: 114797487
GI number: 114797487
Start: 3546307
End: 3546696
Strand: Direct
Name: 114797487
Synonym: HNE_3401
Alternate gene names: NA
Gene position: 3546307-3546696 (Clockwise)
Preceding gene: 114797184
Following gene: 114800276
Centisome position: 95.72
GC content: 63.85
Gene sequence:
>390_bases ATGGACCACATCCCGACCCCCATCCTCTCCGGAATTCGCCAGCGCTGCGGCGCCTGTGGCGAAGGCAAGCTGTTCAAGGG CTATCTGAAGCTCAATGACGCCTGCCCGCATTGCGGCCGGGACATGACTGCCGCAGATACCGCTGACGGGCCGGCATTCT TCGTCGGCTTCGGCGTGCTGATCCTGATGGCGCCCTTCCTGTTCCTCGTACCGATGAGCCCCCTGCCGATCGGGTTGAAG CTGCTGGCGATGGCGGGCGTCGGCGCGGTGGTGACCCTGCTGTGTCTCTGGCTGCTGCCGGCGGCGAAGGGCATTCTGCT CAACCTGCAACTGCACCACATGGCAGAAGAAGCCAATTTCGAGAAATCGCCCGAAACGCCCGACCGCTGA
Upstream 100 bases:
>100_bases GAAACCGGCGCACTCGTGGGCAATGCGCTCACCCACGTCAAGAGGACGCGCGGGCGTTTGTCACGGCGCCAAGCGCGCTG TCAGTGCCTAATTATCGGGC
Downstream 100 bases:
>100_bases GCCAGCCGTCCAAGGCAATGAAAACCCTATCGCCACCCCTGCCCCGATACGTTAGACAGGGTTGGTAAACGCAATCGGCT TTGCGAGGGTGGACGTGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MDHIPTPILSGIRQRCGACGEGKLFKGYLKLNDACPHCGRDMTAADTADGPAFFVGFGVLILMAPFLFLVPMSPLPIGLK LLAMAGVGAVVTLLCLWLLPAAKGILLNLQLHHMAEEANFEKSPETPDR
Sequences:
>Translated_129_residues MDHIPTPILSGIRQRCGACGEGKLFKGYLKLNDACPHCGRDMTAADTADGPAFFVGFGVLILMAPFLFLVPMSPLPIGLK LLAMAGVGAVVTLLCLWLLPAAKGILLNLQLHHMAEEANFEKSPETPDR >Mature_129_residues MDHIPTPILSGIRQRCGACGEGKLFKGYLKLNDACPHCGRDMTAADTADGPAFFVGFGVLILMAPFLFLVPMSPLPIGLK LLAMAGVGAVVTLLCLWLLPAAKGILLNLQLHHMAEEANFEKSPETPDR
Specific function: Unknown
COG id: COG5349
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13800; Mature: 13800
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDHIPTPILSGIRQRCGACGEGKLFKGYLKLNDACPHCGRDMTAADTADGPAFFVGFGVL CCCCCHHHHHHHHHHHCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH ILMAPFLFLVPMSPLPIGLKLLAMAGVGAVVTLLCLWLLPAAKGILLNLQLHHMAEEANF HHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCC EKSPETPDR CCCCCCCCC >Mature Secondary Structure MDHIPTPILSGIRQRCGACGEGKLFKGYLKLNDACPHCGRDMTAADTADGPAFFVGFGVL CCCCCHHHHHHHHHHHCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH ILMAPFLFLVPMSPLPIGLKLLAMAGVGAVVTLLCLWLLPAAKGILLNLQLHHMAEEANF HHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCC EKSPETPDR CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA