Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114797487

Identifier: 114797487

GI number: 114797487

Start: 3546307

End: 3546696

Strand: Direct

Name: 114797487

Synonym: HNE_3401

Alternate gene names: NA

Gene position: 3546307-3546696 (Clockwise)

Preceding gene: 114797184

Following gene: 114800276

Centisome position: 95.72

GC content: 63.85

Gene sequence:

>390_bases
ATGGACCACATCCCGACCCCCATCCTCTCCGGAATTCGCCAGCGCTGCGGCGCCTGTGGCGAAGGCAAGCTGTTCAAGGG
CTATCTGAAGCTCAATGACGCCTGCCCGCATTGCGGCCGGGACATGACTGCCGCAGATACCGCTGACGGGCCGGCATTCT
TCGTCGGCTTCGGCGTGCTGATCCTGATGGCGCCCTTCCTGTTCCTCGTACCGATGAGCCCCCTGCCGATCGGGTTGAAG
CTGCTGGCGATGGCGGGCGTCGGCGCGGTGGTGACCCTGCTGTGTCTCTGGCTGCTGCCGGCGGCGAAGGGCATTCTGCT
CAACCTGCAACTGCACCACATGGCAGAAGAAGCCAATTTCGAGAAATCGCCCGAAACGCCCGACCGCTGA

Upstream 100 bases:

>100_bases
GAAACCGGCGCACTCGTGGGCAATGCGCTCACCCACGTCAAGAGGACGCGCGGGCGTTTGTCACGGCGCCAAGCGCGCTG
TCAGTGCCTAATTATCGGGC

Downstream 100 bases:

>100_bases
GCCAGCCGTCCAAGGCAATGAAAACCCTATCGCCACCCCTGCCCCGATACGTTAGACAGGGTTGGTAAACGCAATCGGCT
TTGCGAGGGTGGACGTGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MDHIPTPILSGIRQRCGACGEGKLFKGYLKLNDACPHCGRDMTAADTADGPAFFVGFGVLILMAPFLFLVPMSPLPIGLK
LLAMAGVGAVVTLLCLWLLPAAKGILLNLQLHHMAEEANFEKSPETPDR

Sequences:

>Translated_129_residues
MDHIPTPILSGIRQRCGACGEGKLFKGYLKLNDACPHCGRDMTAADTADGPAFFVGFGVLILMAPFLFLVPMSPLPIGLK
LLAMAGVGAVVTLLCLWLLPAAKGILLNLQLHHMAEEANFEKSPETPDR
>Mature_129_residues
MDHIPTPILSGIRQRCGACGEGKLFKGYLKLNDACPHCGRDMTAADTADGPAFFVGFGVLILMAPFLFLVPMSPLPIGLK
LLAMAGVGAVVTLLCLWLLPAAKGILLNLQLHHMAEEANFEKSPETPDR

Specific function: Unknown

COG id: COG5349

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13800; Mature: 13800

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHIPTPILSGIRQRCGACGEGKLFKGYLKLNDACPHCGRDMTAADTADGPAFFVGFGVL
CCCCCHHHHHHHHHHHCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
ILMAPFLFLVPMSPLPIGLKLLAMAGVGAVVTLLCLWLLPAAKGILLNLQLHHMAEEANF
HHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCC
EKSPETPDR
CCCCCCCCC
>Mature Secondary Structure
MDHIPTPILSGIRQRCGACGEGKLFKGYLKLNDACPHCGRDMTAADTADGPAFFVGFGVL
CCCCCHHHHHHHHHHHCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
ILMAPFLFLVPMSPLPIGLKLLAMAGVGAVVTLLCLWLLPAAKGILLNLQLHHMAEEANF
HHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCC
EKSPETPDR
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA