Click here to switch to the map view.

The map label for this gene is soxY

Identifier: 114797464

GI number: 114797464

Start: 2607309

End: 2607782

Strand: Reverse

Name: soxY

Synonym: HNE_2478

Alternate gene names: NA

Gene position: 2607782-2607309 (Counterclockwise)

Preceding gene: 114800211

Following gene: 114798637

Centisome position: 70.39

GC content: 60.97

Gene sequence:

>474_bases
ATGTCTCGTCCTCACTCACACCCGCCATTGTGGCGCCGGCGCGCGTTCCTCGCTGCCGCTGGGGCGGCTGTATGCCTCAC
CTTTCTGCCCCTGCCTGCAGCTGCCGAGCCAGAAGACGCCGATGAGGCCATCCGCAATCTGTTTGGCGATCGCCCCATCC
GCGAAGGCAAGGTAACCCTCAAGCTGCCGCCGATTGCCGAGAACGGCAATTCCGTGCAGCTCACCGTTTCCGTCGACAGT
CCGATGACGGAGCAAGACCATGTTCGAAAGATCGCCATCATCTCACCTCGCAACCCGATTCCCGAAATCGCAATCTTCAA
TCTGGGGCCTTATTCTGGCCGGGCGGAGGTCTCTACGCGCGTGCGCCTTGCGGGTACGCAATCGCTGAGGGTCATAGCCG
AGATGAATGATGGATCGCTCTGGGTGGGCAAGGCCAGCACCTACGTCACGCTTGCCGCGTGCATTATCGGATAA

Upstream 100 bases:

>100_bases
CGGCAGGTGGGGCAGGAATTTGACGGTCGGCCTGCGCTCACTGCTGGGCAGATAGAAGACCTGGTCGCCTATTTGAGTTC
ACAGGGAAGCTGACTGCGCC

Downstream 100 bases:

>100_bases
TTTGAGAAGCGCCCATGGCCGTGATCCGGATCTCCGCACCCGAAACTGCAAAGCCTGGCGAGATCATCGAACTCAAAGCG
ATGATCCAGCACCCGATGGA

Product: sulfur oxidation protein SoxY

Products: NA

Alternate protein names: Sulfur Oxidation Y Protein; Sulfur Oxidation Protein; Tat Pathway Signal Sequence Domain Protein; Twin-Arginine Translocation Pathway Signal; Sulphur Oxidation Protein SoxZ

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MSRPHSHPPLWRRRAFLAAAGAAVCLTFLPLPAAAEPEDADEAIRNLFGDRPIREGKVTLKLPPIAENGNSVQLTVSVDS
PMTEQDHVRKIAIISPRNPIPEIAIFNLGPYSGRAEVSTRVRLAGTQSLRVIAEMNDGSLWVGKASTYVTLAACIIG

Sequences:

>Translated_157_residues
MSRPHSHPPLWRRRAFLAAAGAAVCLTFLPLPAAAEPEDADEAIRNLFGDRPIREGKVTLKLPPIAENGNSVQLTVSVDS
PMTEQDHVRKIAIISPRNPIPEIAIFNLGPYSGRAEVSTRVRLAGTQSLRVIAEMNDGSLWVGKASTYVTLAACIIG
>Mature_156_residues
SRPHSHPPLWRRRAFLAAAGAAVCLTFLPLPAAAEPEDADEAIRNLFGDRPIREGKVTLKLPPIAENGNSVQLTVSVDSP
MTEQDHVRKIAIISPRNPIPEIAIFNLGPYSGRAEVSTRVRLAGTQSLRVIAEMNDGSLWVGKASTYVTLAACIIG

Specific function: Unknown

COG id: COG5501

COG function: function code S; Predicted secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16933; Mature: 16802

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPHSHPPLWRRRAFLAAAGAAVCLTFLPLPAAAEPEDADEAIRNLFGDRPIREGKVTL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEE
KLPPIAENGNSVQLTVSVDSPMTEQDHVRKIAIISPRNPIPEIAIFNLGPYSGRAEVSTR
EECCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCEEEEE
VRLAGTQSLRVIAEMNDGSLWVGKASTYVTLAACIIG
EEEECCCEEEEEEEECCCEEEEECCCHHEEEEEECCC
>Mature Secondary Structure 
SRPHSHPPLWRRRAFLAAAGAAVCLTFLPLPAAAEPEDADEAIRNLFGDRPIREGKVTL
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEE
KLPPIAENGNSVQLTVSVDSPMTEQDHVRKIAIISPRNPIPEIAIFNLGPYSGRAEVSTR
EECCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCEEEEE
VRLAGTQSLRVIAEMNDGSLWVGKASTYVTLAACIIG
EEEECCCEEEEEEEECCCEEEEECCCHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA