| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797449
Identifier: 114797449
GI number: 114797449
Start: 3241971
End: 3243053
Strand: Direct
Name: 114797449
Synonym: HNE_3067
Alternate gene names: NA
Gene position: 3241971-3243053 (Clockwise)
Preceding gene: 114798997
Following gene: 114800274
Centisome position: 87.5
GC content: 62.6
Gene sequence:
>1083_bases GTGGCGGCACCGTCAAAAGATGAAATTCTCGCGCATTTCCGCGAGCAGGCGGAATTCTGCCGGGCTCTGGGCTCGCCCTT CATGGAAGCCCTCTGCCTCGCCATGGTGGAAGATGCGGAGCAGCACGGCCCGGTCGGTCGCCTGATAAAGGGCTGGGCGG GAGACCCGAGACGCGACGCCCTCGCGCTGCGCATTGCCGGATACCTGCATTATTCCGCGCTCGGCGATAAAGCGCCTGAG CTCACGGCTGTTTATCCATCGGCCAATCCGGACTGGACGATGGAGGCCGTCTGGCCTGTCGCTCACGACTGGCTCGCGCG GCACGAGAGAGCGGCAAAGGTTTTCATCAAATCGCCGCCACAGACCAATGAAACCCGCCGCGCCATTGCGCTCCTGCCGG GTTTCCTGAAGGTCGCCAGCCTGTTTCCGGGACCGATGCACCTGCTGGAGCTGGGCGCCAGCGCCGGCCTTAATCAGAAC TGGGACAGGTTCAATTACCAGACAACCCGTTGGGAGCTGACAGGCAACAGCGATGTGGTCATTGATACTGACTGGAACGG TCCGCCTCCGGATCATATTGACATGTCGTTCAATGTCGCGACCCGCGCCGCTTGTGACCAGTCCCCTGTAAACCTGTCCA AGCCCTCCGCTGCGCGGCGCCTGAAATCCTATATCTGGCCAGACCAGCCCGCACGCCTTGCCCGGCTCGATGCTGCCATT GCCCTCGCCCGCCGCACGCGCGTCCGTGTGGAGAAAGCAGACGCCGCTGACTGGCTCAAGGCAAAGCTGGCATCGCGTCC GGACGAGGGCCCCACGGTCATCTATCACTCGGTGTTCTTGCAATATCCGCCTGCCGAGACGCGCCGTGCCCTGCTGTCCC TGATCGAAGACGCCGGTGCGGAAGCTACTTGGGACCGGCCACTTGCCTGGGTCTGCTTCGAGCCCGCTGCCTTCTTTCAA GGCCCTACCCAGGTTGGCATCGAGCCCAATGAATTCATCACCTACATGCGCGTCTGGCCAGAAGGCGAAGATCACCGCCT GATCCGATCGGACGGCCATGTAACGCAGGTTCAGGCCCTCTAG
Upstream 100 bases:
>100_bases GAGGTTAACACCAGAAATCAGCTGCGCCGCATTAGATTCCGGCTATCAAGCTGCGCTGCATACCTCTATCGGTAGTGCGT GAGCTAAGGGGCACAACCGA
Downstream 100 bases:
>100_bases ATCGCCGCTCCGCTTTCACTCAGGCGGGTGAAGCAGCTAGCGGAAATCATCCTTTGCCCAATCAAGCAGCGTACCCGTCA GCTCACGGACAGCTGCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MAAPSKDEILAHFREQAEFCRALGSPFMEALCLAMVEDAEQHGPVGRLIKGWAGDPRRDALALRIAGYLHYSALGDKAPE LTAVYPSANPDWTMEAVWPVAHDWLARHERAAKVFIKSPPQTNETRRAIALLPGFLKVASLFPGPMHLLELGASAGLNQN WDRFNYQTTRWELTGNSDVVIDTDWNGPPPDHIDMSFNVATRAACDQSPVNLSKPSAARRLKSYIWPDQPARLARLDAAI ALARRTRVRVEKADAADWLKAKLASRPDEGPTVIYHSVFLQYPPAETRRALLSLIEDAGAEATWDRPLAWVCFEPAAFFQ GPTQVGIEPNEFITYMRVWPEGEDHRLIRSDGHVTQVQAL
Sequences:
>Translated_360_residues MAAPSKDEILAHFREQAEFCRALGSPFMEALCLAMVEDAEQHGPVGRLIKGWAGDPRRDALALRIAGYLHYSALGDKAPE LTAVYPSANPDWTMEAVWPVAHDWLARHERAAKVFIKSPPQTNETRRAIALLPGFLKVASLFPGPMHLLELGASAGLNQN WDRFNYQTTRWELTGNSDVVIDTDWNGPPPDHIDMSFNVATRAACDQSPVNLSKPSAARRLKSYIWPDQPARLARLDAAI ALARRTRVRVEKADAADWLKAKLASRPDEGPTVIYHSVFLQYPPAETRRALLSLIEDAGAEATWDRPLAWVCFEPAAFFQ GPTQVGIEPNEFITYMRVWPEGEDHRLIRSDGHVTQVQAL >Mature_359_residues AAPSKDEILAHFREQAEFCRALGSPFMEALCLAMVEDAEQHGPVGRLIKGWAGDPRRDALALRIAGYLHYSALGDKAPEL TAVYPSANPDWTMEAVWPVAHDWLARHERAAKVFIKSPPQTNETRRAIALLPGFLKVASLFPGPMHLLELGASAGLNQNW DRFNYQTTRWELTGNSDVVIDTDWNGPPPDHIDMSFNVATRAACDQSPVNLSKPSAARRLKSYIWPDQPARLARLDAAIA LARRTRVRVEKADAADWLKAKLASRPDEGPTVIYHSVFLQYPPAETRRALLSLIEDAGAEATWDRPLAWVCFEPAAFFQG PTQVGIEPNEFITYMRVWPEGEDHRLIRSDGHVTQVQAL
Specific function: Unknown
COG id: COG4427
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40161; Mature: 40030
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPSKDEILAHFREQAEFCRALGSPFMEALCLAMVEDAEQHGPVGRLIKGWAGDPRRDA CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHH LALRIAGYLHYSALGDKAPELTAVYPSANPDWTMEAVWPVAHDWLARHERAAKVFIKSPP HHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHEEEECCCC QTNETRRAIALLPGFLKVASLFPGPMHLLELGASAGLNQNWDRFNYQTTRWELTGNSDVV CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCEE IDTDWNGPPPDHIDMSFNVATRAACDQSPVNLSKPSAARRLKSYIWPDQPARLARLDAAI EECCCCCCCCCCCEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH ALARRTRVRVEKADAADWLKAKLASRPDEGPTVIYHSVFLQYPPAETRRALLSLIEDAGA HHHHHHHHEEECCCHHHHHHHHHHCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCC EATWDRPLAWVCFEPAAFFQGPTQVGIEPNEFITYMRVWPEGEDHRLIRSDGHVTQVQAL CCCCCCCEEEEEECCHHHHCCCCCCCCCHHHEEEEEEECCCCCCCCEEECCCCEEEEEEC >Mature Secondary Structure AAPSKDEILAHFREQAEFCRALGSPFMEALCLAMVEDAEQHGPVGRLIKGWAGDPRRDA CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHH LALRIAGYLHYSALGDKAPELTAVYPSANPDWTMEAVWPVAHDWLARHERAAKVFIKSPP HHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHEEEECCCC QTNETRRAIALLPGFLKVASLFPGPMHLLELGASAGLNQNWDRFNYQTTRWELTGNSDVV CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCEE IDTDWNGPPPDHIDMSFNVATRAACDQSPVNLSKPSAARRLKSYIWPDQPARLARLDAAI EECCCCCCCCCCCEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH ALARRTRVRVEKADAADWLKAKLASRPDEGPTVIYHSVFLQYPPAETRRALLSLIEDAGA HHHHHHHHEEECCCHHHHHHHHHHCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCC EATWDRPLAWVCFEPAAFFQGPTQVGIEPNEFITYMRVWPEGEDHRLIRSDGHVTQVQAL CCCCCCCEEEEEECCHHHHCCCCCCCCCHHHEEEEEEECCCCCCCCEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA