| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is aroH [H]
Identifier: 114797431
GI number: 114797431
Start: 721515
End: 722891
Strand: Direct
Name: aroH [H]
Synonym: HNE_0709
Alternate gene names: 114797431
Gene position: 721515-722891 (Clockwise)
Preceding gene: 114799468
Following gene: 114798192
Centisome position: 19.47
GC content: 63.62
Gene sequence:
>1377_bases ATGACCTGGCATCCTTCCGACTGGCGCAATCTGCCTGCCAAGCACATCCCGCAGGATTATCCTGATGCGGCGGCCCTGGC AGCTGTCGAAACCCGTTTGAGAAGCTATCCGCCGCTGGTGTTTGCCGGGGAAGCGCGCCGCCTGAAGACGCGCCTGGCAG AAGTTGCGGCCGGCAAAGCCTTCCTGCTGCAAGGCGGGGACTGCGCTGAGAGCTTCAAGGAATTCCACCCGGACAACATC CGCGACACCTTCCGCGTCATCCTCCAGATGGCTGTGGTGCTGACCTTCGCCGCCGCAAAGCCGGTCGTGAAAGTCGGCCG TATCGCCGGCCAGTTCGGCAAGCCGCGCTCTGAACCCATCGAGACCATCGACGGCGTGACGCTGCCTTCCTATCGCGGCG ACAATATCAACGGCATGGAATTCACGCCCGAGTCCCGCATCCCGGACCCCGAGCGCCTGATCCAGGCCTATTCGCAGTCA GCCGCCACGCTGAACCTCCTGCGCGCCTTCAGCCAGGGCGGCTATGCCAGCCTTGCGAACGTCCAGCGCTGGATGCTCGG CTTCGTTGACCGCTCCCCGCAGGGCGAGCGCTATCAGAAGCTGGCTGACCAGATCTCCGCCTCGCTACGCTTCATGGAAG CGGTCGGCCTCAATGCCGAGAGCGTTCCGCAGATGTCGCAGGTGGAGTTCTATACCAGCCATGAGGCGCTGCTGCTGGGT TATGAGGAAGCGATGACCCGCATCGATTCCACCAGTGGCGACTGGTATGACACCTCCGCCCACATGCTGTGGATCGGCCA CCGCACGCGCCAGATCGACCATGCCCATGTCAATTTCTGCAAGGGCGTCAAAAACCCCATCGGCATCAAGTGTGGCCCCG GCATGGAGACCGACGAACTCCTCCGCCTGATCGACACGCTCAATCCCGCAGACGAGCCCGGCCGGATCACGCTGATCTCG CGCTTCGGTTCCGAAGGCGTGAAAGCGGGCCTGCCCCCGCTCGCCCGCGCGGTGAAGAAATCCGGCCGCACGGTCGTCTG GTCATGCGATCCGATGCACGGCAACACGCTGAAAACCGGCACCGGCTTCAAGACACGGCCCGTTGACCGCATCCTCTCCG AAGTGCGCCAGTTCATCGACGTGCTCTCGGCCGAAGGCTGCTATCCCGGCGGCGTCCATTTCGAGATGACCGGCCAGAAC GTCACCGAATGTATCGGCGGCGCGCAGGCGATCTCCGAAGAAGACCTCTCCAGCCGCTACCACACCCATTGCGACCCCCG TCTCAATGGCGAACAGGCCCTGGAACTTGCCTTCCTCGTGGCTGAGAAACTCCAGGCCGCTGAAGTCGAAGCCGCCACGG CCCGCAAAGCGGGCTAA
Upstream 100 bases:
>100_bases ACCCGCGATTCCGCCACCTTCTTGCAGTGAAATTATGGTGAAACTTGAGCAATGGGCGCTCATATGTTTTATGCGGCAAA ATCCAAGTGAGAACCGAGCA
Downstream 100 bases:
>100_bases AACCCGCCCCGCCTGCATCCAAACCCCTCTGCCGCTGCATCTGAGCAATGGCAGAGGAGGCGGGATGCATGGACGAGCTG ATCCGGACATTGATCGAAAC
Product: 3-deoxy-7-phosphoheptulonate synthase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 458; Mature: 457
Protein sequence:
>458_residues MTWHPSDWRNLPAKHIPQDYPDAAALAAVETRLRSYPPLVFAGEARRLKTRLAEVAAGKAFLLQGGDCAESFKEFHPDNI RDTFRVILQMAVVLTFAAAKPVVKVGRIAGQFGKPRSEPIETIDGVTLPSYRGDNINGMEFTPESRIPDPERLIQAYSQS AATLNLLRAFSQGGYASLANVQRWMLGFVDRSPQGERYQKLADQISASLRFMEAVGLNAESVPQMSQVEFYTSHEALLLG YEEAMTRIDSTSGDWYDTSAHMLWIGHRTRQIDHAHVNFCKGVKNPIGIKCGPGMETDELLRLIDTLNPADEPGRITLIS RFGSEGVKAGLPPLARAVKKSGRTVVWSCDPMHGNTLKTGTGFKTRPVDRILSEVRQFIDVLSAEGCYPGGVHFEMTGQN VTECIGGAQAISEEDLSSRYHTHCDPRLNGEQALELAFLVAEKLQAAEVEAATARKAG
Sequences:
>Translated_458_residues MTWHPSDWRNLPAKHIPQDYPDAAALAAVETRLRSYPPLVFAGEARRLKTRLAEVAAGKAFLLQGGDCAESFKEFHPDNI RDTFRVILQMAVVLTFAAAKPVVKVGRIAGQFGKPRSEPIETIDGVTLPSYRGDNINGMEFTPESRIPDPERLIQAYSQS AATLNLLRAFSQGGYASLANVQRWMLGFVDRSPQGERYQKLADQISASLRFMEAVGLNAESVPQMSQVEFYTSHEALLLG YEEAMTRIDSTSGDWYDTSAHMLWIGHRTRQIDHAHVNFCKGVKNPIGIKCGPGMETDELLRLIDTLNPADEPGRITLIS RFGSEGVKAGLPPLARAVKKSGRTVVWSCDPMHGNTLKTGTGFKTRPVDRILSEVRQFIDVLSAEGCYPGGVHFEMTGQN VTECIGGAQAISEEDLSSRYHTHCDPRLNGEQALELAFLVAEKLQAAEVEAATARKAG >Mature_457_residues TWHPSDWRNLPAKHIPQDYPDAAALAAVETRLRSYPPLVFAGEARRLKTRLAEVAAGKAFLLQGGDCAESFKEFHPDNIR DTFRVILQMAVVLTFAAAKPVVKVGRIAGQFGKPRSEPIETIDGVTLPSYRGDNINGMEFTPESRIPDPERLIQAYSQSA ATLNLLRAFSQGGYASLANVQRWMLGFVDRSPQGERYQKLADQISASLRFMEAVGLNAESVPQMSQVEFYTSHEALLLGY EEAMTRIDSTSGDWYDTSAHMLWIGHRTRQIDHAHVNFCKGVKNPIGIKCGPGMETDELLRLIDTLNPADEPGRITLISR FGSEGVKAGLPPLARAVKKSGRTVVWSCDPMHGNTLKTGTGFKTRPVDRILSEVRQFIDVLSAEGCYPGGVHFEMTGQNV TECIGGAQAISEEDLSSRYHTHCDPRLNGEQALELAFLVAEKLQAAEVEAATARKAG
Specific function: Unknown
COG id: COG3200
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II DAHP synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002480 [H]
Pfam domain/function: PF01474 DAHP_synth_2 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 50356; Mature: 50225
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWHPSDWRNLPAKHIPQDYPDAAALAAVETRLRSYPPLVFAGEARRLKTRLAEVAAGKA CCCCCCCHHCCCHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCCE FLLQGGDCAESFKEFHPDNIRDTFRVILQMAVVLTFAAAKPVVKVGRIAGQFGKPRSEPI EEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH ETIDGVTLPSYRGDNINGMEFTPESRIPDPERLIQAYSQSAATLNLLRAFSQGGYASLAN HHHCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VQRWMLGFVDRSPQGERYQKLADQISASLRFMEAVGLNAESVPQMSQVEFYTSHEALLLG HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHEEEECCCCEEEE YEEAMTRIDSTSGDWYDTSAHMLWIGHRTRQIDHAHVNFCKGVKNPIGIKCGPGMETDEL HHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCEEECCCCCHHHH LRLIDTLNPADEPGRITLISRFGSEGVKAGLPPLARAVKKSGRTVVWSCDPMHGNTLKTG HHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCEECCC TGFKTRPVDRILSEVRQFIDVLSAEGCYPGGVHFEMTGQNVTECIGGAQAISEEDLSSRY CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHCHHHHHHHHHHHHHH HTHCDPRLNGEQALELAFLVAEKLQAAEVEAATARKAG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TWHPSDWRNLPAKHIPQDYPDAAALAAVETRLRSYPPLVFAGEARRLKTRLAEVAAGKA CCCCCCHHCCCHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCCE FLLQGGDCAESFKEFHPDNIRDTFRVILQMAVVLTFAAAKPVVKVGRIAGQFGKPRSEPI EEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH ETIDGVTLPSYRGDNINGMEFTPESRIPDPERLIQAYSQSAATLNLLRAFSQGGYASLAN HHHCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VQRWMLGFVDRSPQGERYQKLADQISASLRFMEAVGLNAESVPQMSQVEFYTSHEALLLG HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHEEEECCCCEEEE YEEAMTRIDSTSGDWYDTSAHMLWIGHRTRQIDHAHVNFCKGVKNPIGIKCGPGMETDEL HHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCEEECCCCCHHHH LRLIDTLNPADEPGRITLISRFGSEGVKAGLPPLARAVKKSGRTVVWSCDPMHGNTLKTG HHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCEECCC TGFKTRPVDRILSEVRQFIDVLSAEGCYPGGVHFEMTGQNVTECIGGAQAISEEDLSSRY CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHCHHHHHHHHHHHHHH HTHCDPRLNGEQALELAFLVAEKLQAAEVEAATARKAG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12000953; 8760910 [H]