| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is fhuA [H]
Identifier: 114797335
GI number: 114797335
Start: 2430629
End: 2432803
Strand: Reverse
Name: fhuA [H]
Synonym: HNE_2329
Alternate gene names: 114797335
Gene position: 2432803-2430629 (Counterclockwise)
Preceding gene: 114800328
Following gene: 114798295
Centisome position: 65.66
GC content: 55.36
Gene sequence:
>2175_bases ATGGTGCAAACACAACGCCAATCGGCAACAGGAAACTTCTTCAAGGCGACGCTTCTCAGCGCGGCGGCCGGTCTCTCGGT ATTGGCGCCAGTGGCGCTGGCCCAGGAAGAGGACGCGGACAGTGTTCAGGAGGCCGTGATTGTCATTGCGCCTGAATATG TTCCGACAAGTTCTCTGACGGCAACGAAATCGGGTATCCCCCTTGTGGAAACACCGCAATCCATCTCCGTGATCACGCGG GACCAGATCGACCTTCTGAACTTCATCGATGCGCAGCAGGCCGTTCGTTACGTTGCCGGTGTGTCAGGTGAAAACTATGG CCCGGATCTGCGTTTCGATTTTATTTCAATTCGTGGCTTCACGCCGCGTCAGTTTGTTGACGGTCTGGCCACACCTGTTT CCACGTCTATCCGGTCTACGGGTGTTGATCTCTATGCGTTCGAAACGCTCGACATTCTGAAAGGCCCAGCCTCGGTTCTG TATGGGAGCGCGCCTCCCGGAGGCATCTACAACCAGACGAGCCGACGCGCCGAGGCCGAGACCAGCGGCGAAGTTACGCT TCAGTATGGCACGGACGATTACAAACAAATCGCCGCGACCGGAACGACGGCGCTGACCGATACGATCAGCGGGCGCCTGA CGGTTCTGGCGCGCGACCGGGAAGCGGAGCGGGATTTCGTTGAAGCGCAGCGCTATCTTGTTGCGCCAGCTCTCAACATC AAACTTGGCCCTCAAACCGAACTCGATCTGCTTGGCTATTATCAGGACGATCAGGTTGATGGCGACACCAACGGCTTCCT TCCAATCTTCGGAACGCTTCTGCCCAACCCGCTTGGGAAGGTTGATCCTTCGGTGAACCTGGGTGAGCCAGACTTCAACT TCTATGAGCGTGATCAGTACGGCGTTGGCTTTGAATTCACGCATAGCTTCAGCGAGGCTTTGCAGTTTGATGCGAACCTG AAATATACCGATTATGCCGAGTACCGGGACGTCATCTACGGAACCGGGCTTCTTGCGGACAATCGCACCGTCACGCGCGG AAACTCTCCCTACCAGGAGGATGTCTCCAACCTTGCGATTGATACACGTTTGTCGGGCGATTTGACGTCAGGAAGCATCA CGCATCGCTTCCTGGTTGGGCTTGATTACCGCAATGTCGACAACAATGCCGGCTATGGCTTCACGGGCGCCAGCTCGATT GATCTCTTTGATCCGGTATACAATCAGGTGCCGAATATCAGCCCCGGTATAACGACCCGCTTCAATGAGCAGGAAGCGAC GCAGCTCGGCATTTATGCCCAAGACCAGATAAAGTTCGGCAAGCTTCTCCTGCTGGCGAGTGGTCGCTTCGACAAGGTCG AAAGTGAGTATCTACAAGCGTTCACGCCATTTGGTTCGCCCGCTCCGTCAACGAGTTCAGATCAGGAGAAATTCACCTAC CGGATCGGCGCAAACTATCTTCTTGATAGCGGCGTGTCTCCCTATATCAGCTACGCGACATCGTTTGAGCCTGTGCTGGG GGCAGATATAAATGGGGATGCTTTCGACCCGACGATCGGCACACAAGTAGAAGCGGGTGTGAAGTATGATGGGAGCAATC TCAGAGACGGTTTCGATATCTTCGCCTCTGCAGCTGTTTTCAATATCCTGCAGGAGGACGTGGTCGCGACCTCTTCAAGC CTTTCTACGCCCGTGTTTGGCATTCAGCTCGGTGAAGTCGAAGTATCGGGCGCTGAATTCGAGTTCGTTGCGCGCATCGA TGATGCTCTGTCCTTGAACGGATCTTATAGTTTCACGGACAGCGAGATCAAAGACAGCAACACGCCGCTCGAAATTGGTC AGCCGCTGCCGGTCACGCCGGAACACAAGTTCTCTTTCCTGGTCGATTATACCGTTCAGGGCGGAAGCTTCCGTGGGCTC GGCTACAATGTGGGCGTGCGTTACAGCAGCGAAAGCGCAGGCAGCCTGCCAAGCGCGTTCAACCCGGTAGTTTATAACAG CGATGAGTTGTTCCTGTTCGATGCCAGCATCCGGTACGACACTGAAAAATGGCGCTTTGCCATCAACAGCTCGAACCTTC TGGACGATGAGTATGTGGCGCGCTGTGCCAGCACTTCGAACTGCACCTATGGCGCCGGCCGCCAGGTCATTGCTTCGGTG ACGCGCAAGTTCTGA
Upstream 100 bases:
>100_bases ACAGTTCCAGACCCGAAGCCGAAATACTTACTTTCTGTGAAATGTTATCAACTCCATCAGTTCGCATTGGGCGAACCAAG ACGCAGCAGGGGTGCAAGTC
Downstream 100 bases:
>100_bases TCTGCAATCTGGATGGGTGCCGCATGGTTTGCTTGAAGCCTGAGGGAGACCGGAACGCCGCTTCGTTCCGTGTACGCCTG ATGGCCGCGGCGCTCGTCCT
Product: outer membrane receptor (OMR) family protein
Products: NA
Alternate protein names: Ferric hydroxamate receptor; Ferric hydroxamate uptake [H]
Number of amino acids: Translated: 724; Mature: 724
Protein sequence:
>724_residues MVQTQRQSATGNFFKATLLSAAAGLSVLAPVALAQEEDADSVQEAVIVIAPEYVPTSSLTATKSGIPLVETPQSISVITR DQIDLLNFIDAQQAVRYVAGVSGENYGPDLRFDFISIRGFTPRQFVDGLATPVSTSIRSTGVDLYAFETLDILKGPASVL YGSAPPGGIYNQTSRRAEAETSGEVTLQYGTDDYKQIAATGTTALTDTISGRLTVLARDREAERDFVEAQRYLVAPALNI KLGPQTELDLLGYYQDDQVDGDTNGFLPIFGTLLPNPLGKVDPSVNLGEPDFNFYERDQYGVGFEFTHSFSEALQFDANL KYTDYAEYRDVIYGTGLLADNRTVTRGNSPYQEDVSNLAIDTRLSGDLTSGSITHRFLVGLDYRNVDNNAGYGFTGASSI DLFDPVYNQVPNISPGITTRFNEQEATQLGIYAQDQIKFGKLLLLASGRFDKVESEYLQAFTPFGSPAPSTSSDQEKFTY RIGANYLLDSGVSPYISYATSFEPVLGADINGDAFDPTIGTQVEAGVKYDGSNLRDGFDIFASAAVFNILQEDVVATSSS LSTPVFGIQLGEVEVSGAEFEFVARIDDALSLNGSYSFTDSEIKDSNTPLEIGQPLPVTPEHKFSFLVDYTVQGGSFRGL GYNVGVRYSSESAGSLPSAFNPVVYNSDELFLFDASIRYDTEKWRFAINSSNLLDDEYVARCASTSNCTYGAGRQVIASV TRKF
Sequences:
>Translated_724_residues MVQTQRQSATGNFFKATLLSAAAGLSVLAPVALAQEEDADSVQEAVIVIAPEYVPTSSLTATKSGIPLVETPQSISVITR DQIDLLNFIDAQQAVRYVAGVSGENYGPDLRFDFISIRGFTPRQFVDGLATPVSTSIRSTGVDLYAFETLDILKGPASVL YGSAPPGGIYNQTSRRAEAETSGEVTLQYGTDDYKQIAATGTTALTDTISGRLTVLARDREAERDFVEAQRYLVAPALNI KLGPQTELDLLGYYQDDQVDGDTNGFLPIFGTLLPNPLGKVDPSVNLGEPDFNFYERDQYGVGFEFTHSFSEALQFDANL KYTDYAEYRDVIYGTGLLADNRTVTRGNSPYQEDVSNLAIDTRLSGDLTSGSITHRFLVGLDYRNVDNNAGYGFTGASSI DLFDPVYNQVPNISPGITTRFNEQEATQLGIYAQDQIKFGKLLLLASGRFDKVESEYLQAFTPFGSPAPSTSSDQEKFTY RIGANYLLDSGVSPYISYATSFEPVLGADINGDAFDPTIGTQVEAGVKYDGSNLRDGFDIFASAAVFNILQEDVVATSSS LSTPVFGIQLGEVEVSGAEFEFVARIDDALSLNGSYSFTDSEIKDSNTPLEIGQPLPVTPEHKFSFLVDYTVQGGSFRGL GYNVGVRYSSESAGSLPSAFNPVVYNSDELFLFDASIRYDTEKWRFAINSSNLLDDEYVARCASTSNCTYGAGRQVIASV TRKF >Mature_724_residues MVQTQRQSATGNFFKATLLSAAAGLSVLAPVALAQEEDADSVQEAVIVIAPEYVPTSSLTATKSGIPLVETPQSISVITR DQIDLLNFIDAQQAVRYVAGVSGENYGPDLRFDFISIRGFTPRQFVDGLATPVSTSIRSTGVDLYAFETLDILKGPASVL YGSAPPGGIYNQTSRRAEAETSGEVTLQYGTDDYKQIAATGTTALTDTISGRLTVLARDREAERDFVEAQRYLVAPALNI KLGPQTELDLLGYYQDDQVDGDTNGFLPIFGTLLPNPLGKVDPSVNLGEPDFNFYERDQYGVGFEFTHSFSEALQFDANL KYTDYAEYRDVIYGTGLLADNRTVTRGNSPYQEDVSNLAIDTRLSGDLTSGSITHRFLVGLDYRNVDNNAGYGFTGASSI DLFDPVYNQVPNISPGITTRFNEQEATQLGIYAQDQIKFGKLLLLASGRFDKVESEYLQAFTPFGSPAPSTSSDQEKFTY RIGANYLLDSGVSPYISYATSFEPVLGADINGDAFDPTIGTQVEAGVKYDGSNLRDGFDIFASAAVFNILQEDVVATSSS LSTPVFGIQLGEVEVSGAEFEFVARIDDALSLNGSYSFTDSEIKDSNTPLEIGQPLPVTPEHKFSFLVDYTVQGGSFRGL GYNVGVRYSSESAGSLPSAFNPVVYNSDELFLFDASIRYDTEKWRFAINSSNLLDDEYVARCASTSNCTYGAGRQVIASV TRKF
Specific function: This receptor binds the ferrichrome-iron ligand. It interacts with the tonB protein, which is responsible for energy coupling of the ferrichrome-promoted iron transport system. Acts as a receptor for bacteriophage T5 as well as T1, phi80 and colicin M. Bi
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=759, Percent_Identity=31.2252964426877, Blast_Score=321, Evalue=8e-89, Organism=Escherichia coli, GI1787024, Length=750, Percent_Identity=24.9333333333333, Blast_Score=119, Evalue=8e-28, Organism=Escherichia coli, GI1787344, Length=640, Percent_Identity=21.71875, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 78597; Mature: 78597
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.1 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.1 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQTQRQSATGNFFKATLLSAAAGLSVLAPVALAQEEDADSVQEAVIVIAPEYVPTSSLT CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHCEEEEEECCCCCCCCCC ATKSGIPLVETPQSISVITRDQIDLLNFIDAQQAVRYVAGVSGENYGPDLRFDFISIRGF CCCCCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCC TPRQFVDGLATPVSTSIRSTGVDLYAFETLDILKGPASVLYGSAPPGGIYNQTSRRAEAE CHHHHHHHHCCCHHHHHHHCCCEEEEEEHHHHHCCCHHHEECCCCCCCCCCCCHHHCCCC TSGEVTLQYGTDDYKQIAATGTTALTDTISGRLTVLARDREAERDFVEAQRYLVAPALNI CCCCEEEEECCCHHHHHHHCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHHEEEEEEEE KLGPQTELDLLGYYQDDQVDGDTNGFLPIFGTLLPNPLGKVDPSVNLGEPDFNFYERDQY EECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCC GVGFEFTHSFSEALQFDANLKYTDYAEYRDVIYGTGLLADNRTVTRGNSPYQEDVSNLAI CCCEEEHHHHHHHHHHCCCCCCCCHHHHHHHHEECCEEECCCEEECCCCCHHHHHHHEEE DTRLSGDLTSGSITHRFLVGLDYRNVDNNAGYGFTGASSIDLFDPVYNQVPNISPGITTR EEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHCHHHHHCCCCCCCCEEC FNEQEATQLGIYAQDQIKFGKLLLLASGRFDKVESEYLQAFTPFGSPAPSTSSDQEKFTY CCCHHHHEECEEEECCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEE RIGANYLLDSGVSPYISYATSFEPVLGADINGDAFDPTIGTQVEAGVKYDGSNLRDGFDI EECCCCEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCCCHHHH FASAAVFNILQEDVVATSSSLSTPVFGIQLGEVEVSGAEFEFVARIDDALSLNGSYSFTD HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEECCCCEEEEEECCHHEECCCCEEECC SEIKDSNTPLEIGQPLPVTPEHKFSFLVDYTVQGGSFRGLGYNVGVRYSSESAGSLPSAF CCCCCCCCCEECCCCCCCCCCCCEEEEEEEEECCCCEECCCEEEEEEECCCCCCCCCCCC NPVVYNSDELFLFDASIRYDTEKWRFAINSSNLLDDEYVARCASTSNCTYGAGRQVIASV CCEEECCCEEEEEECCEEECCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHH TRKF HHCC >Mature Secondary Structure MVQTQRQSATGNFFKATLLSAAAGLSVLAPVALAQEEDADSVQEAVIVIAPEYVPTSSLT CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHCEEEEEECCCCCCCCCC ATKSGIPLVETPQSISVITRDQIDLLNFIDAQQAVRYVAGVSGENYGPDLRFDFISIRGF CCCCCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCC TPRQFVDGLATPVSTSIRSTGVDLYAFETLDILKGPASVLYGSAPPGGIYNQTSRRAEAE CHHHHHHHHCCCHHHHHHHCCCEEEEEEHHHHHCCCHHHEECCCCCCCCCCCCHHHCCCC TSGEVTLQYGTDDYKQIAATGTTALTDTISGRLTVLARDREAERDFVEAQRYLVAPALNI CCCCEEEEECCCHHHHHHHCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHHEEEEEEEE KLGPQTELDLLGYYQDDQVDGDTNGFLPIFGTLLPNPLGKVDPSVNLGEPDFNFYERDQY EECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCC GVGFEFTHSFSEALQFDANLKYTDYAEYRDVIYGTGLLADNRTVTRGNSPYQEDVSNLAI CCCEEEHHHHHHHHHHCCCCCCCCHHHHHHHHEECCEEECCCEEECCCCCHHHHHHHEEE DTRLSGDLTSGSITHRFLVGLDYRNVDNNAGYGFTGASSIDLFDPVYNQVPNISPGITTR EEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHCHHHHHCCCCCCCCEEC FNEQEATQLGIYAQDQIKFGKLLLLASGRFDKVESEYLQAFTPFGSPAPSTSSDQEKFTY CCCHHHHEECEEEECCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEE RIGANYLLDSGVSPYISYATSFEPVLGADINGDAFDPTIGTQVEAGVKYDGSNLRDGFDI EECCCCEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCCCHHHH FASAAVFNILQEDVVATSSSLSTPVFGIQLGEVEVSGAEFEFVARIDDALSLNGSYSFTD HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEECCCCEEEEEECCHHEECCCCEEECC SEIKDSNTPLEIGQPLPVTPEHKFSFLVDYTVQGGSFRGLGYNVGVRYSSESAGSLPSAF CCCCCCCCCEECCCCCCCCCCCCEEEEEEEEECCCCEECCCEEEEEEECCCCCCCCCCCC NPVVYNSDELFLFDASIRYDTEKWRFAINSSNLLDDEYVARCASTSNCTYGAGRQVIASV CCEEECCCEEEEEECCEEECCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHH TRKF HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3079747; 8202364; 9278503; 2823072; 7515827; 8617231; 9856937; 9865695; 10850805 [H]