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The map label for this gene is trbI [H]

Identifier: 114797320

GI number: 114797320

Start: 1763238

End: 1764482

Strand: Reverse

Name: trbI [H]

Synonym: HNE_1720

Alternate gene names: 114797320

Gene position: 1764482-1763238 (Counterclockwise)

Preceding gene: 114799000

Following gene: 114797995

Centisome position: 47.62

GC content: 69.88

Gene sequence:

>1245_bases
ATGACCCAGCCGCCGCCTCTCAAGGAAACCGCCCGCCAGCTGGAGATCCGCTCAAAGCCGAAGCCCGCCACCCGGATCAA
CCGCAAACTGCTGCTCGCTGGCGCGGGCCTCGGCGCGCTCGGCCTCTTCGCCGCCGCCACCTTTGCGCTGGCCCCGCCCC
GGCCCCCAGAGCCCGCCCCGCAGGATGAGCTGCTCGTGGCGGGCAAGCGCAAGCCCGATGGGTTTTCGGCGCTCCCGGCC
GACTATACCGCGCTCGGGGACGTGCCCGTGCTCGGGACGCCCGTCTCTGGGGATCTCGGCGCGACCATCCGGGCCGCTGA
GGAGGCTTATGGCATCGAACCGGACTTCCAGACCGAGTACCGCACCGACTTCCGGCCACGGCCGGAAGAGGAAGCGGCCC
GCACCGCGCGGCTGGAAGCCGCCGCCCTGGCCGAAGAGGCGGCCCGCGCGCCGCTCCTGTTCCGGCTCGGCAATGCGGCC
GCGCCTGGCCCCGCTCCGGCACGCCCCACAGACGCCAGCTTTGATCTCTCTTCGGAACTCCTCGCCCTGGCGCGGCCATC
CCCGAACGCCGGAGCGAGCCCCCCGCCCGATCCAAACCTCCAGGCCCGGAAGGCCGCCTTTGCCAGCGACCGTGCAGGGG
GCCCCATCTACAATCCCGACCGGGTTCAGGATCCGCTTTCGCCCTACCAGCTGATGGCGGGCTCCCTGATCCCGGCCAGC
CTGATCACCGGGATCAACTCCGATCTTCCCGGCGCGGTCATCGCCCAGGTCACGCAGAACGTTTATGACACCGTTCGCGG
CCAGCACCGCCTGATCCCCCAGGGCAGCCGCCTGATCGGGCGCTACCAGTCGGAAGTCTCGTTCGGCCAGGACCGGGCGC
TGGTCGTCTGGGACCGGATCCTGATGCCCGATGGCAGCTCGATCACGATCTCGGAGCCGGGCAGCGATACCGCAGGATAT
GCGGGCCTCAAAGACCGGACCGATCATCATTGGGACAGGGTCTTTGCTGCCGCTGGTCTCGCCACGATGCTCGGCATCGG
CGCCGAGCTCGGCCCCAGCGAAGACGGAGATATCGAGCGCGCGATCCGCCGGGGCACCACCGATACAATCAACGAAGCCG
GCCAGCGCGCGGTCGATCGCAGCCTCGGGGTCCAGCCTTCGATCACCATCCGTCCGGGCTGGCCCGTCCGCGTCCTCGTG
ACAAAGGACCTCGTCCTGCGTCCCTATCCGGAGACAGCCCCGTGA

Upstream 100 bases:

>100_bases
ACCGCCGCCGAGCTGCGGCACGGGACAAAGCCTCAGACGGTCGTGCGCATATCAAAAGCAAGCGCGGAGCCCAGGTCCCG
CTGGCGGAGAGGTTGAGCCC

Downstream 100 bases:

>100_bases
ACCTGCGCCTTGCAAAACTCCCTGACCGCACGCCGGTGAAGCTCACCCTGGCGCTCGATCCGGATACCGCGGCCGCGCTG
CAGGATTATGCGGCGCTCTA

Product: type IV secretion system protein TrbI family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MTQPPPLKETARQLEIRSKPKPATRINRKLLLAGAGLGALGLFAAATFALAPPRPPEPAPQDELLVAGKRKPDGFSALPA
DYTALGDVPVLGTPVSGDLGATIRAAEEAYGIEPDFQTEYRTDFRPRPEEEAARTARLEAAALAEEAARAPLLFRLGNAA
APGPAPARPTDASFDLSSELLALARPSPNAGASPPPDPNLQARKAAFASDRAGGPIYNPDRVQDPLSPYQLMAGSLIPAS
LITGINSDLPGAVIAQVTQNVYDTVRGQHRLIPQGSRLIGRYQSEVSFGQDRALVVWDRILMPDGSSITISEPGSDTAGY
AGLKDRTDHHWDRVFAAAGLATMLGIGAELGPSEDGDIERAIRRGTTDTINEAGQRAVDRSLGVQPSITIRPGWPVRVLV
TKDLVLRPYPETAP

Sequences:

>Translated_414_residues
MTQPPPLKETARQLEIRSKPKPATRINRKLLLAGAGLGALGLFAAATFALAPPRPPEPAPQDELLVAGKRKPDGFSALPA
DYTALGDVPVLGTPVSGDLGATIRAAEEAYGIEPDFQTEYRTDFRPRPEEEAARTARLEAAALAEEAARAPLLFRLGNAA
APGPAPARPTDASFDLSSELLALARPSPNAGASPPPDPNLQARKAAFASDRAGGPIYNPDRVQDPLSPYQLMAGSLIPAS
LITGINSDLPGAVIAQVTQNVYDTVRGQHRLIPQGSRLIGRYQSEVSFGQDRALVVWDRILMPDGSSITISEPGSDTAGY
AGLKDRTDHHWDRVFAAAGLATMLGIGAELGPSEDGDIERAIRRGTTDTINEAGQRAVDRSLGVQPSITIRPGWPVRVLV
TKDLVLRPYPETAP
>Mature_413_residues
TQPPPLKETARQLEIRSKPKPATRINRKLLLAGAGLGALGLFAAATFALAPPRPPEPAPQDELLVAGKRKPDGFSALPAD
YTALGDVPVLGTPVSGDLGATIRAAEEAYGIEPDFQTEYRTDFRPRPEEEAARTARLEAAALAEEAARAPLLFRLGNAAA
PGPAPARPTDASFDLSSELLALARPSPNAGASPPPDPNLQARKAAFASDRAGGPIYNPDRVQDPLSPYQLMAGSLIPASL
ITGINSDLPGAVIAQVTQNVYDTVRGQHRLIPQGSRLIGRYQSEVSFGQDRALVVWDRILMPDGSSITISEPGSDTAGYA
GLKDRTDHHWDRVFAAAGLATMLGIGAELGPSEDGDIERAIRRGTTDTINEAGQRAVDRSLGVQPSITIRPGWPVRVLVT
KDLVLRPYPETAP

Specific function: Unknown

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 43874; Mature: 43743

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPPPLKETARQLEIRSKPKPATRINRKLLLAGAGLGALGLFAAATFALAPPRPPEPAP
CCCCCCHHHHHHHHHHCCCCCCHHHHCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCC
QDELLVAGKRKPDGFSALPADYTALGDVPVLGTPVSGDLGATIRAAEEAYGIEPDFQTEY
CCCEEEECCCCCCCCCCCCCCCHHCCCCCEECCCCCCCCCCHHHHHHHHCCCCCCCCCCC
RTDFRPRPEEEAARTARLEAAALAEEAARAPLLFRLGNAAAPGPAPARPTDASFDLSSEL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHH
LALARPSPNAGASPPPDPNLQARKAAFASDRAGGPIYNPDRVQDPLSPYQLMAGSLIPAS
HHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHHHHCCCHHHH
LITGINSDLPGAVIAQVTQNVYDTVRGQHRLIPQGSRLIGRYQSEVSFGQDRALVVWDRI
HHHCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHCCCCCCEEEEEEEE
LMPDGSSITISEPGSDTAGYAGLKDRTDHHWDRVFAAAGLATMLGIGAELGPSEDGDIER
ECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
AIRRGTTDTINEAGQRAVDRSLGVQPSITIRPGWPVRVLVTKDLVLRPYPETAP
HHHCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEECCEEECCCCCCCC
>Mature Secondary Structure 
TQPPPLKETARQLEIRSKPKPATRINRKLLLAGAGLGALGLFAAATFALAPPRPPEPAP
CCCCCHHHHHHHHHHCCCCCCHHHHCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCC
QDELLVAGKRKPDGFSALPADYTALGDVPVLGTPVSGDLGATIRAAEEAYGIEPDFQTEY
CCCEEEECCCCCCCCCCCCCCCHHCCCCCEECCCCCCCCCCHHHHHHHHCCCCCCCCCCC
RTDFRPRPEEEAARTARLEAAALAEEAARAPLLFRLGNAAAPGPAPARPTDASFDLSSEL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHH
LALARPSPNAGASPPPDPNLQARKAAFASDRAGGPIYNPDRVQDPLSPYQLMAGSLIPAS
HHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHHHHCCCHHHH
LITGINSDLPGAVIAQVTQNVYDTVRGQHRLIPQGSRLIGRYQSEVSFGQDRALVVWDRI
HHHCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHCCCCCCEEEEEEEE
LMPDGSSITISEPGSDTAGYAGLKDRTDHHWDRVFAAAGLATMLGIGAELGPSEDGDIER
ECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
AIRRGTTDTINEAGQRAVDRSLGVQPSITIRPGWPVRVLVTKDLVLRPYPETAP
HHHCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEECCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]