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The map label for this gene is accD

Identifier: 114797289

GI number: 114797289

Start: 3608997

End: 3609977

Strand: Reverse

Name: accD

Synonym: HNE_3473

Alternate gene names: 114797289

Gene position: 3609977-3608997 (Counterclockwise)

Preceding gene: 114798201

Following gene: 114800401

Centisome position: 97.43

GC content: 62.28

Gene sequence:

>981_bases
ATGAACTGGATCAACAAGGTAACGCCGCCCGGCCTCAAGACGATGATGTCCAAGAAGGACACGCCGGACGATCTGTGGGT
GAAATGTCCTGCTTCGGGCGAGCTGATCTATCGCAATGATCTTGAGCAGAGCTGGTATGTGACGCCGGCGGGCGCGCATC
TTCGCATCTCGCCCCGCATGCGGTTCCGCATTCTGTTTGATGACGAGCGCTGGGAGCCGATTTCGCTGCCGCAGGTGCCG
CTCGACCCGCTGAAATTCAAGGATGACAAGCCTTATCCGGCGCGCCTGAAGGCGGCCAAGGCGAAGATCCTCAATCGCGA
CATCAAGGAAACCGAAGACGGCGGCGCGCCGCTTTTGCAGGAAGACTGCATGGTGGCCGCGTATGGCAAGATTGGCGGGG
TTCCCGCGGTCGTGCTGGTGCAGGATTTCGAATTCATGGGCGGATCGCTCGGCATGGCAGCGGGCGAGGCGTTCATTACC
GCCGCGCAGCTCGCCCTGGCGCGGAAATCTGCTTTTGTGGTCTGCACCGCTTCGGGCGGAGCGCGGATGCAGGAGGGCAC
GCTGAGCCTGATGCAGATGCCGCGCACCACGCTGGCGATCAATGATCTGGCCGACGCGAAGCTGCCCTATGTGGTGGTGC
TGACGGACCCGACTTCGGGCGGGGTGTCGGCCTCTTATGCGATGCTGGGCGATGTTCACATTGCCGAGCCGGGCGCGATG
ATTGCGTTTTCCGGGCCGCGCGTGATTGAGCAGACGATCCGCGAGAGCCTGCCTAAGGGCTTTCAGCGGTCTGAATTCCT
GCGCGAAAAAGGCCAGGTGGATATTGTCGTTGACCGGCGCAAACTGAAAGCAACGGTTGCGCGTGTGCTGGGCCATCTGC
TGCCGATGTCGCGCCGGCGGGATGATCGCTCGACGCTGCAGCTGACGCCGCCAAAAACGCATGCGCCCAAGCCGCCCGAG
CCGAAGGTCAAGCCTGATTGA

Upstream 100 bases:

>100_bases
GGCGGCACCCGCAATGGGCGAGCTTGCAGGAGAACTGCGCCGCGCGCTCGCAGGCGTGTCCAAAGGCTGATACCGCCGGG
AAATCGGGAGACATCTTCAG

Downstream 100 bases:

>100_bases
GCGGCAATTCACCGGCCGTTGATGCCGCGCTGAAGCGGTTTGAAGGCCTCTATCCCGATACTATCGAGCTTTCGCTCGGG
CGCATCGAGCATGCGCTCGA

Product: acetyl-CoA carboxylase carboxyl transferase subunit beta

Products: NA

Alternate protein names: ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MNWINKVTPPGLKTMMSKKDTPDDLWVKCPASGELIYRNDLEQSWYVTPAGAHLRISPRMRFRILFDDERWEPISLPQVP
LDPLKFKDDKPYPARLKAAKAKILNRDIKETEDGGAPLLQEDCMVAAYGKIGGVPAVVLVQDFEFMGGSLGMAAGEAFIT
AAQLALARKSAFVVCTASGGARMQEGTLSLMQMPRTTLAINDLADAKLPYVVVLTDPTSGGVSASYAMLGDVHIAEPGAM
IAFSGPRVIEQTIRESLPKGFQRSEFLREKGQVDIVVDRRKLKATVARVLGHLLPMSRRRDDRSTLQLTPPKTHAPKPPE
PKVKPD

Sequences:

>Translated_326_residues
MNWINKVTPPGLKTMMSKKDTPDDLWVKCPASGELIYRNDLEQSWYVTPAGAHLRISPRMRFRILFDDERWEPISLPQVP
LDPLKFKDDKPYPARLKAAKAKILNRDIKETEDGGAPLLQEDCMVAAYGKIGGVPAVVLVQDFEFMGGSLGMAAGEAFIT
AAQLALARKSAFVVCTASGGARMQEGTLSLMQMPRTTLAINDLADAKLPYVVVLTDPTSGGVSASYAMLGDVHIAEPGAM
IAFSGPRVIEQTIRESLPKGFQRSEFLREKGQVDIVVDRRKLKATVARVLGHLLPMSRRRDDRSTLQLTPPKTHAPKPPE
PKVKPD
>Mature_326_residues
MNWINKVTPPGLKTMMSKKDTPDDLWVKCPASGELIYRNDLEQSWYVTPAGAHLRISPRMRFRILFDDERWEPISLPQVP
LDPLKFKDDKPYPARLKAAKAKILNRDIKETEDGGAPLLQEDCMVAAYGKIGGVPAVVLVQDFEFMGGSLGMAAGEAFIT
AAQLALARKSAFVVCTASGGARMQEGTLSLMQMPRTTLAINDLADAKLPYVVVLTDPTSGGVSASYAMLGDVHIAEPGAM
IAFSGPRVIEQTIRESLPKGFQRSEFLREKGQVDIVVDRRKLKATVARVLGHLLPMSRRRDDRSTLQLTPPKTHAPKPPE
PKVKPD

Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AccD/PCCB family

Homologues:

Organism=Escherichia coli, GI1788655, Length=332, Percent_Identity=40.3614457831325, Blast_Score=237, Evalue=9e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ACCD_HYPNA (Q0BWJ8)

Other databases:

- EMBL:   CP000158
- RefSeq:   YP_762145.1
- ProteinModelPortal:   Q0BWJ8
- SMR:   Q0BWJ8
- STRING:   Q0BWJ8
- GeneID:   4289213
- GenomeReviews:   CP000158_GR
- KEGG:   hne:HNE_3473
- NMPDR:   fig|228405.5.peg.3326
- TIGR:   HNE_3473
- eggNOG:   COG0777
- HOGENOM:   HBG285696
- OMA:   AGEAFIT
- PhylomeDB:   Q0BWJ8
- BioCyc:   HNEP81032:HNE_3473-MONOMER
- HAMAP:   MF_01395
- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011762
- PRINTS:   PR01070

Pfam domain/function: PF01039 Carboxyl_trans

EC number: =6.4.1.2

Molecular weight: Translated: 35843; Mature: 35843

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS50980 COA_CT_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWINKVTPPGLKTMMSKKDTPDDLWVKCPASGELIYRNDLEQSWYVTPAGAHLRISPRM
CCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCEEEECCCCCCEEEECCCCEEEECCCE
RFRILFDDERWEPISLPQVPLDPLKFKDDKPYPARLKAAKAKILNRDIKETEDGGAPLLQ
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCHH
EDCMVAAYGKIGGVPAVVLVQDFEFMGGSLGMAAGEAFITAAQLALARKSAFVVCTASGG
HCCEEEECCCCCCCCEEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC
ARMQEGTLSLMQMPRTTLAINDLADAKLPYVVVLTDPTSGGVSASYAMLGDVHIAEPGAM
CEECHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEECCEEEECCCEE
IAFSGPRVIEQTIRESLPKGFQRSEFLREKGQVDIVVDRRKLKATVARVLGHLLPMSRRR
EEECCCHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHCCHHCCC
DDRSTLQLTPPKTHAPKPPEPKVKPD
CCCCEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNWINKVTPPGLKTMMSKKDTPDDLWVKCPASGELIYRNDLEQSWYVTPAGAHLRISPRM
CCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCEEEECCCCCCEEEECCCCEEEECCCE
RFRILFDDERWEPISLPQVPLDPLKFKDDKPYPARLKAAKAKILNRDIKETEDGGAPLLQ
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCHH
EDCMVAAYGKIGGVPAVVLVQDFEFMGGSLGMAAGEAFITAAQLALARKSAFVVCTASGG
HCCEEEECCCCCCCCEEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC
ARMQEGTLSLMQMPRTTLAINDLADAKLPYVVVLTDPTSGGVSASYAMLGDVHIAEPGAM
CEECHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEECCEEEECCCEE
IAFSGPRVIEQTIRESLPKGFQRSEFLREKGQVDIVVDRRKLKATVARVLGHLLPMSRRR
EEECCCHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHCCHHCCC
DDRSTLQLTPPKTHAPKPPEPKVKPD
CCCCEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA