| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is fabG [H]
Identifier: 114797252
GI number: 114797252
Start: 3639044
End: 3639802
Strand: Reverse
Name: fabG [H]
Synonym: HNE_3502
Alternate gene names: 114797252
Gene position: 3639802-3639044 (Counterclockwise)
Preceding gene: 114797747
Following gene: 114799098
Centisome position: 98.24
GC content: 67.33
Gene sequence:
>759_bases ATGGGCCAGCCAGTTACGCTCGTGCTCGGCCTCGGCCGCGAAGTGGGTGAGGCGATTGCCCGCCGCTTCGAAGACGAAGG CCACAAGGTCCTTGTCGCCGACCCCTCCCAGGAACGCATAGACACCGCGCGCGATACGCTCGATGACGCGGTCCAGTTCT ATCATGGCGAGCTGCATTCCCGCCTCGGCCTGCGCAATGCGGTGACTGCCGCGGTCGAAGCCTTCGGCCGCGTCGATCAC GCGGTCATCGTGCCCGCCTATGAAGACCCTGACACGCTGCTCGATTTTGCCCAGGAGAAGTTTGAAAAAGCCCTCGGCAA ATCCGCCCGCGGCGCCGCCATGGCCTTGCGCGTCATCGCCGAGCGCCTTCTGGAACAGGAAGACCTCCCGGAAACCGGGG TGGAGCGAAAGCGGCAGAAAGGCTCCATCACCTTCGTGCTGCGTTACGCCGCTGCCGCCTCCATGCCGGGCCGCTTCACC GATACCGTCAGCCAGGCCGCCATTCAGGGCGTCATGCGCGCCGGCGCGCTGGAACTGGCGGAGCACACGATCCGTGTGAA CGCCATCGTCTCCCTGCGCCCCAGCGAGGAACGGGCGACGCCCTGGTCCCTCGGCCGCGTGCCGCTGGGCCGCGCGGTGC TTGCCGATGAGATTGCCGGCGCCGCCTTCTTCCTCGCCTCTCGCGACGCGGCCTTCATGACCGGGCAAAGCCTGATCATG GACGGTGGCCGCGCCACGCTGTCAGGCGTGCTCGACTAG
Upstream 100 bases:
>100_bases CGGCAGTCCCGTTTCTCGGGAGGCCGCAACAGGTCTCAAAAGAGGAACGGGACATATGCCGCTCTACCAATCCAGCCGCT TTTCAGAGGCGGTCTGAGCC
Downstream 100 bases:
>100_bases ACTGCCTTCAGCGCCGAGACCCCGCCCGCTTCAGCACTGGCCTCGAAGGTGGCAACCGTCTCTGTGCTGAATGTACCGGC AAGGATGTCCGACACCTTGC
Product: oxidoreductase-like protein
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MGQPVTLVLGLGREVGEAIARRFEDEGHKVLVADPSQERIDTARDTLDDAVQFYHGELHSRLGLRNAVTAAVEAFGRVDH AVIVPAYEDPDTLLDFAQEKFEKALGKSARGAAMALRVIAERLLEQEDLPETGVERKRQKGSITFVLRYAAAASMPGRFT DTVSQAAIQGVMRAGALELAEHTIRVNAIVSLRPSEERATPWSLGRVPLGRAVLADEIAGAAFFLASRDAAFMTGQSLIM DGGRATLSGVLD
Sequences:
>Translated_252_residues MGQPVTLVLGLGREVGEAIARRFEDEGHKVLVADPSQERIDTARDTLDDAVQFYHGELHSRLGLRNAVTAAVEAFGRVDH AVIVPAYEDPDTLLDFAQEKFEKALGKSARGAAMALRVIAERLLEQEDLPETGVERKRQKGSITFVLRYAAAASMPGRFT DTVSQAAIQGVMRAGALELAEHTIRVNAIVSLRPSEERATPWSLGRVPLGRAVLADEIAGAAFFLASRDAAFMTGQSLIM DGGRATLSGVLD >Mature_251_residues GQPVTLVLGLGREVGEAIARRFEDEGHKVLVADPSQERIDTARDTLDDAVQFYHGELHSRLGLRNAVTAAVEAFGRVDHA VIVPAYEDPDTLLDFAQEKFEKALGKSARGAAMALRVIAERLLEQEDLPETGVERKRQKGSITFVLRYAAAASMPGRFTD TVSQAAIQGVMRAGALELAEHTIRVNAIVSLRPSEERATPWSLGRVPLGRAVLADEIAGAAFFLASRDAAFMTGQSLIMD GGRATLSGVLD
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=265, Percent_Identity=27.1698113207547, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17561402, Length=259, Percent_Identity=25.0965250965251, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI21355319, Length=248, Percent_Identity=27.0161290322581, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 27150; Mature: 27019
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQPVTLVLGLGREVGEAIARRFEDEGHKVLVADPSQERIDTARDTLDDAVQFYHGELHS CCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH RLGLRNAVTAAVEAFGRVDHAVIVPAYEDPDTLLDFAQEKFEKALGKSARGAAMALRVIA HHCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ERLLEQEDLPETGVERKRQKGSITFVLRYAAAASMPGRFTDTVSQAAIQGVMRAGALELA HHHHHHCCCCCCHHHHHHHCCCEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH EHTIRVNAIVSLRPSEERATPWSLGRVPLGRAVLADEIAGAAFFLASRDAAFMTGQSLIM HHHEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCHHEE DGGRATLSGVLD CCCCHHHHCCCC >Mature Secondary Structure GQPVTLVLGLGREVGEAIARRFEDEGHKVLVADPSQERIDTARDTLDDAVQFYHGELHS CCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH RLGLRNAVTAAVEAFGRVDHAVIVPAYEDPDTLLDFAQEKFEKALGKSARGAAMALRVIA HHCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ERLLEQEDLPETGVERKRQKGSITFVLRYAAAASMPGRFTDTVSQAAIQGVMRAGALELA HHHHHHCCCCCCHHHHHHHCCCEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH EHTIRVNAIVSLRPSEERATPWSLGRVPLGRAVLADEIAGAAFFLASRDAAFMTGQSLIM HHHEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCHHEE DGGRATLSGVLD CCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]