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The map label for this gene is 114797242

Identifier: 114797242

GI number: 114797242

Start: 2792178

End: 2792783

Strand: Reverse

Name: 114797242

Synonym: HNE_2631

Alternate gene names: NA

Gene position: 2792783-2792178 (Counterclockwise)

Preceding gene: 114798118

Following gene: 114800067

Centisome position: 75.38

GC content: 60.4

Gene sequence:

>606_bases
ATGCGCCTCTTGGTTGGTGTGGTCATTGCCATTCCGATCGTGGTGATCCTCTTCCTCATGATGAGTGCGCTCATTTCGGT
TGACGAGATCGAGTTGGCTGAAGGTGAAAACCGGACGCTGGCGGCCATCACTCCGCAGAAGCAGGATTCCGAAGTGCGGA
CCCGTTCACGGTCTCAGCCCAAGCGGATCGACGCTGCGCAGAAGCCGCCACCGCCGCCGAAACAGTCGGCCACCAAGTCG
AGCATCAACCTGCCCACACCTAAAATCGATGGCGCTGTTCCGCAGAACCTCGATCTGGGCCGGATGAACTCGCTGGCGAT
TGATCCGGTTGCCGTGTCCGACCGGGATGCGCAGCCGATCCGTCCGCCGACACCTTCGTTCCCGCAGCGTGCGGCTGAAC
GGGGTCTTTCGGGCGAATGTGATGTCCGTTTTGACGTGGATACCCGCGGCAAACCGTACAACATCTCGGCCACCTGTTCG
GACAACATCTTCAAGTCGGAAGCTGAACGCGCGGTGTCGCGCGTGGAGTTTGCGCCGAAGATCGTCCGCGGTCAGGCGGT
TGAGCGCAGGAACGTGGTCTACCCGCTGGAATTCAAGATCCAGTAG

Upstream 100 bases:

>100_bases
ACGTGATGGAAGCGATCAACAAGATTGATGGGGATACGGTCATCAACATCTCGGCGAAGACGACGGGCTAAGGAGGATCG
GTATGCTAAACAATCCATTC

Downstream 100 bases:

>100_bases
GCCCCCAATCGGGTGATGGCGGCCGGCAGCGGCGGCCATCAGCCCCTTCGGAGGCGTTGCCGGTCCGGGCTCATGGGCTT
GTCCGGCGACCCATCAGGTC

Product: TonB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MRLLVGVVIAIPIVVILFLMMSALISVDEIELAEGENRTLAAITPQKQDSEVRTRSRSQPKRIDAAQKPPPPPKQSATKS
SINLPTPKIDGAVPQNLDLGRMNSLAIDPVAVSDRDAQPIRPPTPSFPQRAAERGLSGECDVRFDVDTRGKPYNISATCS
DNIFKSEAERAVSRVEFAPKIVRGQAVERRNVVYPLEFKIQ

Sequences:

>Translated_201_residues
MRLLVGVVIAIPIVVILFLMMSALISVDEIELAEGENRTLAAITPQKQDSEVRTRSRSQPKRIDAAQKPPPPPKQSATKS
SINLPTPKIDGAVPQNLDLGRMNSLAIDPVAVSDRDAQPIRPPTPSFPQRAAERGLSGECDVRFDVDTRGKPYNISATCS
DNIFKSEAERAVSRVEFAPKIVRGQAVERRNVVYPLEFKIQ
>Mature_201_residues
MRLLVGVVIAIPIVVILFLMMSALISVDEIELAEGENRTLAAITPQKQDSEVRTRSRSQPKRIDAAQKPPPPPKQSATKS
SINLPTPKIDGAVPQNLDLGRMNSLAIDPVAVSDRDAQPIRPPTPSFPQRAAERGLSGECDVRFDVDTRGKPYNISATCS
DNIFKSEAERAVSRVEFAPKIVRGQAVERRNVVYPLEFKIQ

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22080; Mature: 22080

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLVGVVIAIPIVVILFLMMSALISVDEIELAEGENRTLAAITPQKQDSEVRTRSRSQP
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCCHHHHHHHCCCC
KRIDAAQKPPPPPKQSATKSSINLPTPKIDGAVPQNLDLGRMNSLAIDPVAVSDRDAQPI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCCCC
RPPTPSFPQRAAERGLSGECDVRFDVDTRGKPYNISATCSDNIFKSEAERAVSRVEFAPK
CCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
IVRGQAVERRNVVYPLEFKIQ
HHHCCCHHCCCCEEEEEEEEC
>Mature Secondary Structure
MRLLVGVVIAIPIVVILFLMMSALISVDEIELAEGENRTLAAITPQKQDSEVRTRSRSQP
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCCHHHHHHHCCCC
KRIDAAQKPPPPPKQSATKSSINLPTPKIDGAVPQNLDLGRMNSLAIDPVAVSDRDAQPI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCCCC
RPPTPSFPQRAAERGLSGECDVRFDVDTRGKPYNISATCSDNIFKSEAERAVSRVEFAPK
CCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
IVRGQAVERRNVVYPLEFKIQ
HHHCCCHHCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA