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The map label for this gene is tex [H]

Identifier: 114797230

GI number: 114797230

Start: 2487917

End: 2490232

Strand: Reverse

Name: tex [H]

Synonym: HNE_2386

Alternate gene names: 114797230

Gene position: 2490232-2487917 (Counterclockwise)

Preceding gene: 114797843

Following gene: 114799409

Centisome position: 67.21

GC content: 62.48

Gene sequence:

>2316_bases
ATGACCGGACAGGTACGTTCTTCTTCTCAGGCTTCTCCGCCTTCCATTGCCCGCATCATTGCTGATGAGCTGGGCGTTCA
GGAGCGTCAGGTTCAGGCGGTCATGGAGCTGCTGGAGGAAGGCGCGACGGTTCCCTTCATCGCGCGCTACCGCAAGGAAC
GCACCGGCGGGCTGGACGATACGCAGCTGCGCAACCTCGCCGAACGGCTCGACTATCTCACCGACCTGGCCAAGCGCCGC
GAAACGGTTCTGAGCGCCATCCGCGAGCAGGGCAAGCTGACGCCCGCGCTGGAGCGCGAGATCAACTGGGCGATGACCAA
GGTGGCGCTGGAAGACCTTTACGCCCCTTACAAACAGAAACGCCGCACCAAGGCGACCATCGCCAAGGAAGCGGGCCTTG
AGCCGCTGGCCGAGCGCCTGCTGGCAAACCCGTCGCTCTCGCCGTTTGATGAGGCCAAGGCGTTCATCGCGTCCGGCAAG
GGCGTGAAGGATATGGATGCGGCGCTGGAAGGCGCGCGGGATATTCTGGTGGAGCGGATCGCCGAGACGCCGCGCCTTGT
CGGAAAGGTGCGCGAGACCGTCTGGAAAGAGGGAAAGCTCGGCTCCAGCCTCGTCAAAGGCAAGGAGCAGGAAGGCGCGA
AGTTTTCCGACTATTTCGACTTTGATGAGCCGGTGACGCAGATGCCGTCGCACCGTGCGCTGGCTGTCCTCCGTGGACAG
AAGGAAGGCGTGCTGAAAGTGAAGCTGGCCGTGCCGGTGGAACAGGGCCGCGAACATCCGGCGCTGCGTGAAATCCGCAC
CGAGTTCGGCATCGCCAAGAAAGGCCGCCCCGGCGACGACTGGCTGATGGATACCGCCGAAGCCGCCTGGAAAAGCAAGA
TGGAGCCCTCCTCCTCGCGCGACGTGATCAGCCGCGTGAAAGAGGGCGCCGACCGCGACGCCATCAAGGTGTTCTCGCGC
AATATGCATGACCTGCTGATGGCGGCGCCCGCTGGCCCAAAGGTTGTGATGGGGATCGACCCTGGCATCCGCACGGGTTG
CAAGGTCGCGATCGTGGACGCGACCGGCAAGCTGCTGGAAACGGCGACCATCTATCCGCATGAACCCAAGAAGGATTGGG
CCGGGTCCCTGATGACGCTGGCAACCCTCTGCAAGCGCCACAAGGTGGAGCTGGTCAGTGTCGGCAACGGCACAGCGGGC
CGCGAGACCGAGAAGCTGGTGGGCGATCTGGGCACCAAGCTGCCCGAGCTGAAGCTGACCAAGATCATGGTGTCGGAGGC
AGGTGCCTCGGTCTATTCCGCCTCGGAGCTGGCGGCGAAGGAGTTTCCGGAACTGGACGTCAGCCTGCGCGGCGCGGTCT
CGATTGCGCGGCGCCTGCAAGATCCGCTGGCGGAGCTGGTGAAGATTGAACCCAAGGCAATTGGCGTTGGCCAGTATCAG
CATGATGTGGATCAGGCAGGCCTTGCCCGCTCGCTCGACGGTGTTGTGGAAGACTGTGTGAACGCGGTGGGCGTGGACGT
GAATACCGCCTCTGTGGCGCTGCTGGCACGCGTAGCGGGCCTCAACGCGACGATTGCGGCCAACATTGTCGCTTATCGTG
AGCAGAACGGTCCGTTCAAGGCGCGTACGGAGCTGAAGAAGGTGCCACGCTTTGGCCCGAAAGCCTTTGAGCAGGCCGCA
GGATTCCTGCGCATCATGAATGGCAAGAACCCGCTGGACGCTTCGGCGGTTCACCCCGAAGCCTATCCGGTGGTTGAGAA
GATTGCCAAGGCGGCTGGCCGTAAGGTCGAGACGATCATTGGCGACAAGGCCTTCATTTCAAAGCTGAAGCCGGAAGACT
TTGCCGACGCGACATTCGGTGTACCGACAATCAAGGACATCCTCAAAGAACTGGAAAAACCCGGCCGCGACCCGCGCCCG
GAGTTCAAGACGGCAACCTTCCAGGAGGGCATAGATAAGGTGACCGACCTGAAGCCCGGTATGCGTCTTGAGGGCGTGGT
GACCAATGTGACCGCCTTCGGCGCATTCGTGGATATTGGCGTGCATCAGGACGGGCTGGTCCATATTTCGGAGATGTCTG
ACACCTTCATCAAAGACCCCCACGATGCCGTGAAAACAGGGCAGGTGGTGAGCGTTACCGTGATGGAGGTGGACGTTGCC
CGCAAGCGGATCGGCCTCAGCATGAAACAGGGGGGTAAGCGCCCCTCCGGCGCGCCGGACAAGGCCGCCTCTGCGCTCTC
ATCCAAGGCGCCACCCGCCAAGGAGCAATCCAAGCCATCCGACAGCCCGTTCAGTGTGCTCTCGCGCTTGAAGTAG

Upstream 100 bases:

>100_bases
TGCCTTGAGCGTAAACGAGGTGTAAACGTCTTATCTTCAATTGAGGAGGCTTGCTCCAGATGGGGCAAGAGTTTCCAACG
TTTGCATAAGGCGCGCGTTC

Downstream 100 bases:

>100_bases
CGCATATCAGGACAAGCCGGGACAAATCTGGGCAGGACTTGTAGACAGAAGAGGCCGTCGCGGAGATCGCGGCGGCCTTT
GCTCATCTGGCCCTGGAATA

Product: S1 RNA-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 771; Mature: 770

Protein sequence:

>771_residues
MTGQVRSSSQASPPSIARIIADELGVQERQVQAVMELLEEGATVPFIARYRKERTGGLDDTQLRNLAERLDYLTDLAKRR
ETVLSAIREQGKLTPALEREINWAMTKVALEDLYAPYKQKRRTKATIAKEAGLEPLAERLLANPSLSPFDEAKAFIASGK
GVKDMDAALEGARDILVERIAETPRLVGKVRETVWKEGKLGSSLVKGKEQEGAKFSDYFDFDEPVTQMPSHRALAVLRGQ
KEGVLKVKLAVPVEQGREHPALREIRTEFGIAKKGRPGDDWLMDTAEAAWKSKMEPSSSRDVISRVKEGADRDAIKVFSR
NMHDLLMAAPAGPKVVMGIDPGIRTGCKVAIVDATGKLLETATIYPHEPKKDWAGSLMTLATLCKRHKVELVSVGNGTAG
RETEKLVGDLGTKLPELKLTKIMVSEAGASVYSASELAAKEFPELDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQ
HDVDQAGLARSLDGVVEDCVNAVGVDVNTASVALLARVAGLNATIAANIVAYREQNGPFKARTELKKVPRFGPKAFEQAA
GFLRIMNGKNPLDASAVHPEAYPVVEKIAKAAGRKVETIIGDKAFISKLKPEDFADATFGVPTIKDILKELEKPGRDPRP
EFKTATFQEGIDKVTDLKPGMRLEGVVTNVTAFGAFVDIGVHQDGLVHISEMSDTFIKDPHDAVKTGQVVSVTVMEVDVA
RKRIGLSMKQGGKRPSGAPDKAASALSSKAPPAKEQSKPSDSPFSVLSRLK

Sequences:

>Translated_771_residues
MTGQVRSSSQASPPSIARIIADELGVQERQVQAVMELLEEGATVPFIARYRKERTGGLDDTQLRNLAERLDYLTDLAKRR
ETVLSAIREQGKLTPALEREINWAMTKVALEDLYAPYKQKRRTKATIAKEAGLEPLAERLLANPSLSPFDEAKAFIASGK
GVKDMDAALEGARDILVERIAETPRLVGKVRETVWKEGKLGSSLVKGKEQEGAKFSDYFDFDEPVTQMPSHRALAVLRGQ
KEGVLKVKLAVPVEQGREHPALREIRTEFGIAKKGRPGDDWLMDTAEAAWKSKMEPSSSRDVISRVKEGADRDAIKVFSR
NMHDLLMAAPAGPKVVMGIDPGIRTGCKVAIVDATGKLLETATIYPHEPKKDWAGSLMTLATLCKRHKVELVSVGNGTAG
RETEKLVGDLGTKLPELKLTKIMVSEAGASVYSASELAAKEFPELDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQ
HDVDQAGLARSLDGVVEDCVNAVGVDVNTASVALLARVAGLNATIAANIVAYREQNGPFKARTELKKVPRFGPKAFEQAA
GFLRIMNGKNPLDASAVHPEAYPVVEKIAKAAGRKVETIIGDKAFISKLKPEDFADATFGVPTIKDILKELEKPGRDPRP
EFKTATFQEGIDKVTDLKPGMRLEGVVTNVTAFGAFVDIGVHQDGLVHISEMSDTFIKDPHDAVKTGQVVSVTVMEVDVA
RKRIGLSMKQGGKRPSGAPDKAASALSSKAPPAKEQSKPSDSPFSVLSRLK
>Mature_770_residues
TGQVRSSSQASPPSIARIIADELGVQERQVQAVMELLEEGATVPFIARYRKERTGGLDDTQLRNLAERLDYLTDLAKRRE
TVLSAIREQGKLTPALEREINWAMTKVALEDLYAPYKQKRRTKATIAKEAGLEPLAERLLANPSLSPFDEAKAFIASGKG
VKDMDAALEGARDILVERIAETPRLVGKVRETVWKEGKLGSSLVKGKEQEGAKFSDYFDFDEPVTQMPSHRALAVLRGQK
EGVLKVKLAVPVEQGREHPALREIRTEFGIAKKGRPGDDWLMDTAEAAWKSKMEPSSSRDVISRVKEGADRDAIKVFSRN
MHDLLMAAPAGPKVVMGIDPGIRTGCKVAIVDATGKLLETATIYPHEPKKDWAGSLMTLATLCKRHKVELVSVGNGTAGR
ETEKLVGDLGTKLPELKLTKIMVSEAGASVYSASELAAKEFPELDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQH
DVDQAGLARSLDGVVEDCVNAVGVDVNTASVALLARVAGLNATIAANIVAYREQNGPFKARTELKKVPRFGPKAFEQAAG
FLRIMNGKNPLDASAVHPEAYPVVEKIAKAAGRKVETIIGDKAFISKLKPEDFADATFGVPTIKDILKELEKPGRDPRPE
FKTATFQEGIDKVTDLKPGMRLEGVVTNVTAFGAFVDIGVHQDGLVHISEMSDTFIKDPHDAVKTGQVVSVTVMEVDVAR
KRIGLSMKQGGKRPSGAPDKAASALSSKAPPAKEQSKPSDSPFSVLSRLK

Specific function: Transcription accessory protein. Exact function not known [H]

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=796, Percent_Identity=33.5427135678392, Blast_Score=378, Evalue=1e-104,
Organism=Homo sapiens, GI27597090, Length=772, Percent_Identity=22.9274611398964, Blast_Score=117, Evalue=3e-26,
Organism=Escherichia coli, GI87082262, Length=718, Percent_Identity=59.4707520891365, Blast_Score=844, Evalue=0.0,
Organism=Escherichia coli, GI1787140, Length=80, Percent_Identity=41.25, Blast_Score=70, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17511129, Length=710, Percent_Identity=30.4225352112676, Blast_Score=254, Evalue=1e-67,
Organism=Caenorhabditis elegans, GI17552892, Length=310, Percent_Identity=27.0967741935484, Blast_Score=74, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6320850, Length=94, Percent_Identity=44.6808510638298, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI62484314, Length=780, Percent_Identity=32.3076923076923, Blast_Score=389, Evalue=1e-108,
Organism=Drosophila melanogaster, GI24640080, Length=767, Percent_Identity=19.8174706649283, Blast_Score=92, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 83555; Mature: 83424

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGQVRSSSQASPPSIARIIADELGVQERQVQAVMELLEEGATVPFIARYRKERTGGLDD
CCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCH
TQLRNLAERLDYLTDLAKRRETVLSAIREQGKLTPALEREINWAMTKVALEDLYAPYKQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RRTKATIAKEAGLEPLAERLLANPSLSPFDEAKAFIASGKGVKDMDAALEGARDILVERI
HHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
AETPRLVGKVRETVWKEGKLGSSLVKGKEQEGAKFSDYFDFDEPVTQMPSHRALAVLRGQ
HHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHCCC
KEGVLKVKLAVPVEQGREHPALREIRTEFGIAKKGRPGDDWLMDTAEAAWKSKMEPSSSR
CCCEEEEEEECCHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHH
DVISRVKEGADRDAIKVFSRNMHDLLMAAPAGPKVVMGIDPGIRTGCKVAIVDATGKLLE
HHHHHHHCCCCHHHHHHHHCCHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCHHHH
TATIYPHEPKKDWAGSLMTLATLCKRHKVELVSVGNGTAGRETEKLVGDLGTKLPELKLT
HCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHH
KIMVSEAGASVYSASELAAKEFPELDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQ
HHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
HDVDQAGLARSLDGVVEDCVNAVGVDVNTASVALLARVAGLNATIAANIVAYREQNGPFK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCH
ARTELKKVPRFGPKAFEQAAGFLRIMNGKNPLDASAVHPEAYPVVEKIAKAAGRKVETII
HHHHHHHCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEHHHH
GDKAFISKLKPEDFADATFGVPTIKDILKELEKPGRDPRPEFKTATFQEGIDKVTDLKPG
CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC
MRLEGVVTNVTAFGAFVDIGVHQDGLVHISEMSDTFIKDPHDAVKTGQVVSVTVMEVDVA
CEECHHHHHHHHHHHHHEECCCCCCCEEHHHHHHHHHCCCHHHHHCCCEEEEEEHHHHHH
RKRIGLSMKQGGKRPSGAPDKAASALSSKAPPAKEQSKPSDSPFSVLSRLK
HHHHCCHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
TGQVRSSSQASPPSIARIIADELGVQERQVQAVMELLEEGATVPFIARYRKERTGGLDD
CCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCH
TQLRNLAERLDYLTDLAKRRETVLSAIREQGKLTPALEREINWAMTKVALEDLYAPYKQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RRTKATIAKEAGLEPLAERLLANPSLSPFDEAKAFIASGKGVKDMDAALEGARDILVERI
HHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
AETPRLVGKVRETVWKEGKLGSSLVKGKEQEGAKFSDYFDFDEPVTQMPSHRALAVLRGQ
HHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHCCC
KEGVLKVKLAVPVEQGREHPALREIRTEFGIAKKGRPGDDWLMDTAEAAWKSKMEPSSSR
CCCEEEEEEECCHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHH
DVISRVKEGADRDAIKVFSRNMHDLLMAAPAGPKVVMGIDPGIRTGCKVAIVDATGKLLE
HHHHHHHCCCCHHHHHHHHCCHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCHHHH
TATIYPHEPKKDWAGSLMTLATLCKRHKVELVSVGNGTAGRETEKLVGDLGTKLPELKLT
HCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHH
KIMVSEAGASVYSASELAAKEFPELDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQ
HHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
HDVDQAGLARSLDGVVEDCVNAVGVDVNTASVALLARVAGLNATIAANIVAYREQNGPFK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCH
ARTELKKVPRFGPKAFEQAAGFLRIMNGKNPLDASAVHPEAYPVVEKIAKAAGRKVETII
HHHHHHHCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEHHHH
GDKAFISKLKPEDFADATFGVPTIKDILKELEKPGRDPRPEFKTATFQEGIDKVTDLKPG
CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC
MRLEGVVTNVTAFGAFVDIGVHQDGLVHISEMSDTFIKDPHDAVKTGQVVSVTVMEVDVA
CEECHHHHHHHHHHHHHEECCCCCCCEEHHHHHHHHHCCCHHHHHCCCEEEEEEHHHHHH
RKRIGLSMKQGGKRPSGAPDKAASALSSKAPPAKEQSKPSDSPFSVLSRLK
HHHHCCHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8755871; 12910271 [H]