Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is ctaE [H]

Identifier: 114797213

GI number: 114797213

Start: 1052011

End: 1052889

Strand: Direct

Name: ctaE [H]

Synonym: HNE_1043

Alternate gene names: 114797213

Gene position: 1052011-1052889 (Clockwise)

Preceding gene: 114799995

Following gene: 114797935

Centisome position: 28.39

GC content: 61.89

Gene sequence:

>879_bases
ATGGCCGGCAGCGACGTCAAACACGATTATCACCTGGTGAACCCCTCGCCGTGGCCGCTTCTCGGCTCGCTGGCGGTCAC
CGTTCTCGCCATTGGCGGCGTAACCTACATGAAAGGCCTCTTTGGCCTGGCTGAAGGCTCCTGGTGGCTCATGGCCATCG
GCTTTGCCATGGTCCTGTGGGTCATGTTCGGCTGGTGGGCGACGGTCATCAAGGAAGGCCGCATCGGCGATCACACCCCC
GTGGTGGAAATCGGCCTGCGCTATGGCATGATCCTGTTCATTGCCTCGGAGATCATGTTCTTCGTGGCCTGGTTCTGGTC
CTTCTTCGAATTCTCCATCTTCTGGGACGCCCGCGTTGGCGCCACCTGGGATTCGGCCAACGCCCTGTTCGCCGATGGCC
TGAACCGTTTCGCTCAGTGGCCCCCGGCAGACGTGACCACGTTTGACCCCTTCCATCTGCCGCTGATGAACACCCTCGTC
CTGCTGCTCTCGGGTACCACGGTCACCTGGGCCCACCACGCGCTGGCCCATGGCGACATGAAAAGCGCCAAGCTCGGCCT
GATCCTCACGATCCTGCTCGGCCTCGGCTTCACCGCGCTTCAGGTCCTCGAATACAGCCATGCCGGCTTCTCGTTTGATG
GCACGCTCTATGGCTCGGCCTTCTACATGGCCACCGGCTTCCACGGCGCCCACGTCGTCATCGGCACGATCTTCCTGATC
GTCTGCCTGATCCGCATGTATGCCGGCAACATGACCCCGAAGAAGCACCTCGGCTTTGAATTTGCCGCCTGGTACTGGCA
CTTCGTGGACGTGGTGTGGCTCTTCCTCTTCGCCTTCGTCTATGTCGCGCCGCATCTGGTGCATGGCGGGGGCCACTAG

Upstream 100 bases:

>100_bases
GCAAATCCGGCCACGCCCGGCTGAAACAGTTGCGAAATAGCGCGCGCTGGCGATAAACAGCGCCAGAGAAATGCATGCGA
TTCCGGAGGGGATTGAGATT

Downstream 100 bases:

>100_bases
GTCCGCTGCCGCCCCCTGGCGGTGATGGATGACACAATCTGGCCCGCCGGTGTTTCCACGCTGGCGGGCTTTGTCTTTCT
GGCGGTCCCGTTTGTCCTAG

Product: cytochrome c oxidase subunit III

Products: NA

Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III; Oxidase aa(3) subunit 3 [H]

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MAGSDVKHDYHLVNPSPWPLLGSLAVTVLAIGGVTYMKGLFGLAEGSWWLMAIGFAMVLWVMFGWWATVIKEGRIGDHTP
VVEIGLRYGMILFIASEIMFFVAWFWSFFEFSIFWDARVGATWDSANALFADGLNRFAQWPPADVTTFDPFHLPLMNTLV
LLLSGTTVTWAHHALAHGDMKSAKLGLILTILLGLGFTALQVLEYSHAGFSFDGTLYGSAFYMATGFHGAHVVIGTIFLI
VCLIRMYAGNMTPKKHLGFEFAAWYWHFVDVVWLFLFAFVYVAPHLVHGGGH

Sequences:

>Translated_292_residues
MAGSDVKHDYHLVNPSPWPLLGSLAVTVLAIGGVTYMKGLFGLAEGSWWLMAIGFAMVLWVMFGWWATVIKEGRIGDHTP
VVEIGLRYGMILFIASEIMFFVAWFWSFFEFSIFWDARVGATWDSANALFADGLNRFAQWPPADVTTFDPFHLPLMNTLV
LLLSGTTVTWAHHALAHGDMKSAKLGLILTILLGLGFTALQVLEYSHAGFSFDGTLYGSAFYMATGFHGAHVVIGTIFLI
VCLIRMYAGNMTPKKHLGFEFAAWYWHFVDVVWLFLFAFVYVAPHLVHGGGH
>Mature_291_residues
AGSDVKHDYHLVNPSPWPLLGSLAVTVLAIGGVTYMKGLFGLAEGSWWLMAIGFAMVLWVMFGWWATVIKEGRIGDHTPV
VEIGLRYGMILFIASEIMFFVAWFWSFFEFSIFWDARVGATWDSANALFADGLNRFAQWPPADVTTFDPFHLPLMNTLVL
LLSGTTVTWAHHALAHGDMKSAKLGLILTILLGLGFTALQVLEYSHAGFSFDGTLYGSAFYMATGFHGAHVVIGTIFLIV
CLIRMYAGNMTPKKHLGFEFAAWYWHFVDVVWLFLFAFVYVAPHLVHGGGH

Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]

Homologues:

Organism=Homo sapiens, GI251831113, Length=276, Percent_Identity=43.4782608695652, Blast_Score=202, Evalue=3e-52,
Organism=Escherichia coli, GI1786633, Length=139, Percent_Identity=32.3741007194245, Blast_Score=65, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6226542, Length=276, Percent_Identity=34.0579710144928, Blast_Score=154, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000298
- InterPro:   IPR013833 [H]

Pfam domain/function: PF00510 COX3 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 32522; Mature: 32391

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSDVKHDYHLVNPSPWPLLGSLAVTVLAIGGVTYMKGLFGLAEGSWWLMAIGFAMVLW
CCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VMFGWWATVIKEGRIGDHTPVVEIGLRYGMILFIASEIMFFVAWFWSFFEFSIFWDARVG
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
ATWDSANALFADGLNRFAQWPPADVTTFDPFHLPLMNTLVLLLSGTTVTWAHHALAHGDM
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCH
KSAKLGLILTILLGLGFTALQVLEYSHAGFSFDGTLYGSAFYMATGFHGAHVVIGTIFLI
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEECCEEEEEECCCCHHHHHHHHHHH
VCLIRMYAGNMTPKKHLGFEFAAWYWHFVDVVWLFLFAFVYVAPHLVHGGGH
HHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AGSDVKHDYHLVNPSPWPLLGSLAVTVLAIGGVTYMKGLFGLAEGSWWLMAIGFAMVLW
CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VMFGWWATVIKEGRIGDHTPVVEIGLRYGMILFIASEIMFFVAWFWSFFEFSIFWDARVG
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
ATWDSANALFADGLNRFAQWPPADVTTFDPFHLPLMNTLVLLLSGTTVTWAHHALAHGDM
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCH
KSAKLGLILTILLGLGFTALQVLEYSHAGFSFDGTLYGSAFYMATGFHGAHVVIGTIFLI
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEECCEEEEEECCCCHHHHHHHHHHH
VCLIRMYAGNMTPKKHLGFEFAAWYWHFVDVVWLFLFAFVYVAPHLVHGGGH
HHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3019767; 2832167; 7651515 [H]