| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is ctaE [H]
Identifier: 114797213
GI number: 114797213
Start: 1052011
End: 1052889
Strand: Direct
Name: ctaE [H]
Synonym: HNE_1043
Alternate gene names: 114797213
Gene position: 1052011-1052889 (Clockwise)
Preceding gene: 114799995
Following gene: 114797935
Centisome position: 28.39
GC content: 61.89
Gene sequence:
>879_bases ATGGCCGGCAGCGACGTCAAACACGATTATCACCTGGTGAACCCCTCGCCGTGGCCGCTTCTCGGCTCGCTGGCGGTCAC CGTTCTCGCCATTGGCGGCGTAACCTACATGAAAGGCCTCTTTGGCCTGGCTGAAGGCTCCTGGTGGCTCATGGCCATCG GCTTTGCCATGGTCCTGTGGGTCATGTTCGGCTGGTGGGCGACGGTCATCAAGGAAGGCCGCATCGGCGATCACACCCCC GTGGTGGAAATCGGCCTGCGCTATGGCATGATCCTGTTCATTGCCTCGGAGATCATGTTCTTCGTGGCCTGGTTCTGGTC CTTCTTCGAATTCTCCATCTTCTGGGACGCCCGCGTTGGCGCCACCTGGGATTCGGCCAACGCCCTGTTCGCCGATGGCC TGAACCGTTTCGCTCAGTGGCCCCCGGCAGACGTGACCACGTTTGACCCCTTCCATCTGCCGCTGATGAACACCCTCGTC CTGCTGCTCTCGGGTACCACGGTCACCTGGGCCCACCACGCGCTGGCCCATGGCGACATGAAAAGCGCCAAGCTCGGCCT GATCCTCACGATCCTGCTCGGCCTCGGCTTCACCGCGCTTCAGGTCCTCGAATACAGCCATGCCGGCTTCTCGTTTGATG GCACGCTCTATGGCTCGGCCTTCTACATGGCCACCGGCTTCCACGGCGCCCACGTCGTCATCGGCACGATCTTCCTGATC GTCTGCCTGATCCGCATGTATGCCGGCAACATGACCCCGAAGAAGCACCTCGGCTTTGAATTTGCCGCCTGGTACTGGCA CTTCGTGGACGTGGTGTGGCTCTTCCTCTTCGCCTTCGTCTATGTCGCGCCGCATCTGGTGCATGGCGGGGGCCACTAG
Upstream 100 bases:
>100_bases GCAAATCCGGCCACGCCCGGCTGAAACAGTTGCGAAATAGCGCGCGCTGGCGATAAACAGCGCCAGAGAAATGCATGCGA TTCCGGAGGGGATTGAGATT
Downstream 100 bases:
>100_bases GTCCGCTGCCGCCCCCTGGCGGTGATGGATGACACAATCTGGCCCGCCGGTGTTTCCACGCTGGCGGGCTTTGTCTTTCT GGCGGTCCCGTTTGTCCTAG
Product: cytochrome c oxidase subunit III
Products: NA
Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III; Oxidase aa(3) subunit 3 [H]
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MAGSDVKHDYHLVNPSPWPLLGSLAVTVLAIGGVTYMKGLFGLAEGSWWLMAIGFAMVLWVMFGWWATVIKEGRIGDHTP VVEIGLRYGMILFIASEIMFFVAWFWSFFEFSIFWDARVGATWDSANALFADGLNRFAQWPPADVTTFDPFHLPLMNTLV LLLSGTTVTWAHHALAHGDMKSAKLGLILTILLGLGFTALQVLEYSHAGFSFDGTLYGSAFYMATGFHGAHVVIGTIFLI VCLIRMYAGNMTPKKHLGFEFAAWYWHFVDVVWLFLFAFVYVAPHLVHGGGH
Sequences:
>Translated_292_residues MAGSDVKHDYHLVNPSPWPLLGSLAVTVLAIGGVTYMKGLFGLAEGSWWLMAIGFAMVLWVMFGWWATVIKEGRIGDHTP VVEIGLRYGMILFIASEIMFFVAWFWSFFEFSIFWDARVGATWDSANALFADGLNRFAQWPPADVTTFDPFHLPLMNTLV LLLSGTTVTWAHHALAHGDMKSAKLGLILTILLGLGFTALQVLEYSHAGFSFDGTLYGSAFYMATGFHGAHVVIGTIFLI VCLIRMYAGNMTPKKHLGFEFAAWYWHFVDVVWLFLFAFVYVAPHLVHGGGH >Mature_291_residues AGSDVKHDYHLVNPSPWPLLGSLAVTVLAIGGVTYMKGLFGLAEGSWWLMAIGFAMVLWVMFGWWATVIKEGRIGDHTPV VEIGLRYGMILFIASEIMFFVAWFWSFFEFSIFWDARVGATWDSANALFADGLNRFAQWPPADVTTFDPFHLPLMNTLVL LLSGTTVTWAHHALAHGDMKSAKLGLILTILLGLGFTALQVLEYSHAGFSFDGTLYGSAFYMATGFHGAHVVIGTIFLIV CLIRMYAGNMTPKKHLGFEFAAWYWHFVDVVWLFLFAFVYVAPHLVHGGGH
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]
Homologues:
Organism=Homo sapiens, GI251831113, Length=276, Percent_Identity=43.4782608695652, Blast_Score=202, Evalue=3e-52, Organism=Escherichia coli, GI1786633, Length=139, Percent_Identity=32.3741007194245, Blast_Score=65, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6226542, Length=276, Percent_Identity=34.0579710144928, Blast_Score=154, Evalue=1e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000298 - InterPro: IPR013833 [H]
Pfam domain/function: PF00510 COX3 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 32522; Mature: 32391
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGSDVKHDYHLVNPSPWPLLGSLAVTVLAIGGVTYMKGLFGLAEGSWWLMAIGFAMVLW CCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH VMFGWWATVIKEGRIGDHTPVVEIGLRYGMILFIASEIMFFVAWFWSFFEFSIFWDARVG HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC ATWDSANALFADGLNRFAQWPPADVTTFDPFHLPLMNTLVLLLSGTTVTWAHHALAHGDM CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCH KSAKLGLILTILLGLGFTALQVLEYSHAGFSFDGTLYGSAFYMATGFHGAHVVIGTIFLI HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEECCEEEEEECCCCHHHHHHHHHHH VCLIRMYAGNMTPKKHLGFEFAAWYWHFVDVVWLFLFAFVYVAPHLVHGGGH HHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AGSDVKHDYHLVNPSPWPLLGSLAVTVLAIGGVTYMKGLFGLAEGSWWLMAIGFAMVLW CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH VMFGWWATVIKEGRIGDHTPVVEIGLRYGMILFIASEIMFFVAWFWSFFEFSIFWDARVG HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC ATWDSANALFADGLNRFAQWPPADVTTFDPFHLPLMNTLVLLLSGTTVTWAHHALAHGDM CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCH KSAKLGLILTILLGLGFTALQVLEYSHAGFSFDGTLYGSAFYMATGFHGAHVVIGTIFLI HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEECCEEEEEECCCCHHHHHHHHHHH VCLIRMYAGNMTPKKHLGFEFAAWYWHFVDVVWLFLFAFVYVAPHLVHGGGH HHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3019767; 2832167; 7651515 [H]