| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is yccK [H]
Identifier: 114797195
GI number: 114797195
Start: 2326743
End: 2327714
Strand: Reverse
Name: yccK [H]
Synonym: HNE_2225
Alternate gene names: 114797195
Gene position: 2327714-2326743 (Counterclockwise)
Preceding gene: 114797318
Following gene: 114798404
Centisome position: 62.83
GC content: 60.39
Gene sequence:
>972_bases ATGCATACCCGCAAACTCGGCAGGAATGGACCTGATGTTTCAGCCATTGGCTATGGTGCGATGGGCTTTCATGCCCATTA TGGCGCGGCCGACCCGCAAGCCGGTCTCGACCTCATCCGGCGCGCCTATGATCAGGGCGTAAATTTCTTCGACACGGCAG AAATGTATGGCTGGGGCGAGAACGAAAAGTTCATCGGCCAGGCGGTGAAGGGCTTTCGCGATGAGGTCGTGCTGGCCACA AAATTCGGCTTCACCTATGAAGACGGCGTCTATGGCACCAACAGCCAGCCCGGCCACATCCGCAAAGTAACGGAGAACAG CCTGCGCCATCTCGGCGTCGACCATATCGACATCCTCTATCAGCACCGCGTCGATCCCGATGTCCCGATCGAAGACGTTG CCGGGACCATCCGGGATCTGATCGCCGAGGGCAAGGTAAAGTATTTTGGCCTCAGCGAAGCCGGGCCGCAGACGATCCGC AAGGCCCATGCCGTGCAGCCCGTCACCGTCCTGCAGACCGAATATTCCGTATTCGAACGCAATGTTGAAACGGTTCTGCC CACCCTACGGGAACTGGGCATCGGCTTTGTCGCTTATTCGCCGCTGGGCCGGGGTTTTCTTACAAGCGCCGTCAAACCGT CTGCGGAGTATGAAGACACCGATATGCGCCGCTTCGACCCCCGCTGGCAGCCGGGTAATTTCGAGAAGAACCTTGACGCG GTCCGCCAGCTCGGTGAGCTGGCTAAGGACAAGGGCATCACGGTGTCTCAACTGGCGCTCGCCTGGCTGCTCGCCCAGGG CGAGGACATCGTTCCGATCCCGGGCACCCGCCGGATCGACCGGCTTGAGGAAAACCTCGCTTCGGCAGAGGTGACGCTGT CGACTGATGATCTTGCCGGTATCCGGAACATCCTTCCGGAGGGCGCGTTCGGCGCGCGCTATGCCGGCGATATGGTTCCG GACTGGCTCTGA
Upstream 100 bases:
>100_bases GCATCCGGCAGGATCAGGCAATCATCCGGGACCATCGGGCATCCATCGGCTGCGCCGTCGGGCTTACATGGACGTTCTCA ATTCCAGAAAGGACGTCCCG
Downstream 100 bases:
>100_bases CCGCCACCCCAGACTTCCCCAAGAGCTACAGTGTAGACGGATCTTGTGTTCAGCTCGTCGCGGCGCAACCGTCACGCTTT CTGGCGCCACTCCGACCTCA
Product: aldo/keto reductase family oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MHTRKLGRNGPDVSAIGYGAMGFHAHYGAADPQAGLDLIRRAYDQGVNFFDTAEMYGWGENEKFIGQAVKGFRDEVVLAT KFGFTYEDGVYGTNSQPGHIRKVTENSLRHLGVDHIDILYQHRVDPDVPIEDVAGTIRDLIAEGKVKYFGLSEAGPQTIR KAHAVQPVTVLQTEYSVFERNVETVLPTLRELGIGFVAYSPLGRGFLTSAVKPSAEYEDTDMRRFDPRWQPGNFEKNLDA VRQLGELAKDKGITVSQLALAWLLAQGEDIVPIPGTRRIDRLEENLASAEVTLSTDDLAGIRNILPEGAFGARYAGDMVP DWL
Sequences:
>Translated_323_residues MHTRKLGRNGPDVSAIGYGAMGFHAHYGAADPQAGLDLIRRAYDQGVNFFDTAEMYGWGENEKFIGQAVKGFRDEVVLAT KFGFTYEDGVYGTNSQPGHIRKVTENSLRHLGVDHIDILYQHRVDPDVPIEDVAGTIRDLIAEGKVKYFGLSEAGPQTIR KAHAVQPVTVLQTEYSVFERNVETVLPTLRELGIGFVAYSPLGRGFLTSAVKPSAEYEDTDMRRFDPRWQPGNFEKNLDA VRQLGELAKDKGITVSQLALAWLLAQGEDIVPIPGTRRIDRLEENLASAEVTLSTDDLAGIRNILPEGAFGARYAGDMVP DWL >Mature_323_residues MHTRKLGRNGPDVSAIGYGAMGFHAHYGAADPQAGLDLIRRAYDQGVNFFDTAEMYGWGENEKFIGQAVKGFRDEVVLAT KFGFTYEDGVYGTNSQPGHIRKVTENSLRHLGVDHIDILYQHRVDPDVPIEDVAGTIRDLIAEGKVKYFGLSEAGPQTIR KAHAVQPVTVLQTEYSVFERNVETVLPTLRELGIGFVAYSPLGRGFLTSAVKPSAEYEDTDMRRFDPRWQPGNFEKNLDA VRQLGELAKDKGITVSQLALAWLLAQGEDIVPIPGTRRIDRLEENLASAEVTLSTDDLAGIRNILPEGAFGARYAGDMVP DWL
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=321, Percent_Identity=27.7258566978193, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI4504825, Length=318, Percent_Identity=27.6729559748428, Blast_Score=115, Evalue=5e-26, Organism=Homo sapiens, GI27436964, Length=332, Percent_Identity=28.0120481927711, Blast_Score=114, Evalue=9e-26, Organism=Homo sapiens, GI27436962, Length=324, Percent_Identity=28.7037037037037, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI27436966, Length=324, Percent_Identity=28.7037037037037, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI27436971, Length=308, Percent_Identity=29.5454545454545, Blast_Score=112, Evalue=4e-25, Organism=Homo sapiens, GI223718702, Length=321, Percent_Identity=28.6604361370716, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI41327764, Length=278, Percent_Identity=29.4964028776978, Blast_Score=82, Evalue=9e-16, Organism=Homo sapiens, GI41152114, Length=229, Percent_Identity=28.3842794759825, Blast_Score=78, Evalue=1e-14, Organism=Escherichia coli, GI1789375, Length=330, Percent_Identity=29.3939393939394, Blast_Score=152, Evalue=3e-38, Organism=Escherichia coli, GI1788070, Length=314, Percent_Identity=31.8471337579618, Blast_Score=135, Evalue=4e-33, Organism=Escherichia coli, GI87081735, Length=319, Percent_Identity=30.7210031347962, Blast_Score=134, Evalue=7e-33, Organism=Escherichia coli, GI1787674, Length=304, Percent_Identity=26.9736842105263, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1788081, Length=320, Percent_Identity=26.25, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI1789199, Length=345, Percent_Identity=25.7971014492754, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI48994888, Length=280, Percent_Identity=26.4285714285714, Blast_Score=75, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6323998, Length=311, Percent_Identity=27.3311897106109, Blast_Score=114, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6325169, Length=329, Percent_Identity=26.1398176291793, Blast_Score=113, Evalue=4e-26, Organism=Saccharomyces cerevisiae, GI6319958, Length=311, Percent_Identity=25.4019292604502, Blast_Score=111, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6319951, Length=296, Percent_Identity=25, Blast_Score=95, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6325384, Length=288, Percent_Identity=28.125, Blast_Score=94, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6322615, Length=267, Percent_Identity=25.8426966292135, Blast_Score=94, Evalue=4e-20, Organism=Drosophila melanogaster, GI24646155, Length=319, Percent_Identity=27.2727272727273, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24640980, Length=334, Percent_Identity=25.748502994012, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI45549126, Length=334, Percent_Identity=25.748502994012, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI24646159, Length=275, Percent_Identity=23.6363636363636, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 35694; Mature: 35694
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTRKLGRNGPDVSAIGYGAMGFHAHYGAADPQAGLDLIRRAYDQGVNFFDTAEMYGWGE CCCCCCCCCCCCCCEECCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHCCCC NEKFIGQAVKGFRDEVVLATKFGFTYEDGVYGTNSQPGHIRKVTENSLRHLGVDHIDILY CHHHHHHHHHHHHHCEEEEEECCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH QHRVDPDVPIEDVAGTIRDLIAEGKVKYFGLSEAGPQTIRKAHAVQPVTVLQTEYSVFER HHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHH NVETVLPTLRELGIGFVAYSPLGRGFLTSAVKPSAEYEDTDMRRFDPRWQPGNFEKNLDA HHHHHHHHHHHHCCCEEEECCCCCHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCHHHHHH VRQLGELAKDKGITVSQLALAWLLAQGEDIVPIPGTRRIDRLEENLASAEVTLSTDDLAG HHHHHHHHHHCCCHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHCEEEECCHHHHH IRNILPEGAFGARYAGDMVPDWL HHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHTRKLGRNGPDVSAIGYGAMGFHAHYGAADPQAGLDLIRRAYDQGVNFFDTAEMYGWGE CCCCCCCCCCCCCCEECCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHCCCC NEKFIGQAVKGFRDEVVLATKFGFTYEDGVYGTNSQPGHIRKVTENSLRHLGVDHIDILY CHHHHHHHHHHHHHCEEEEEECCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH QHRVDPDVPIEDVAGTIRDLIAEGKVKYFGLSEAGPQTIRKAHAVQPVTVLQTEYSVFER HHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHH NVETVLPTLRELGIGFVAYSPLGRGFLTSAVKPSAEYEDTDMRRFDPRWQPGNFEKNLDA HHHHHHHHHHHHCCCEEEECCCCCHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCHHHHHH VRQLGELAKDKGITVSQLALAWLLAQGEDIVPIPGTRRIDRLEENLASAEVTLSTDDLAG HHHHHHHHHHCCCHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHCEEEECCHHHHH IRNILPEGAFGARYAGDMVPDWL HHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377; 9106203 [H]