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The map label for this gene is yaeJ [C]

Identifier: 114797179

GI number: 114797179

Start: 2859671

End: 2860105

Strand: Reverse

Name: yaeJ [C]

Synonym: HNE_2699

Alternate gene names: 114797179

Gene position: 2860105-2859671 (Counterclockwise)

Preceding gene: 114797211

Following gene: 114797818

Centisome position: 77.2

GC content: 64.14

Gene sequence:

>435_bases
ATGGCAGAATTCGGCGATCTGCGGATTTCAGACGCAATAACGGTTCCCGCCTGGGAGCTGAGCGAAGCGTTTGTCCGCGC
GTCCGGACCGGGCGGCCAGAATGTGAACAAGGTGTCCAGCGCTGTGCAACTGACCTGGCATGTCCAGGCGTCGTCCCTGC
CGGCGCCGGTCAAGGAGCGGTTTGCCAAGCTCTTTGCCAGCCGCATCACGGCTGACGGGCGCCTGATGCTGGAGGCGAGC
GAGCATCGCAGTCAGGTCCTCAACCGGACCGCCGCGCGTGAGCGTCTGGCCGAGATGATCCTGAAGGCGTCCGTACCTCC
AAAGCGGCGCGTAAAAACCAAGCCGACCGCCGGCAGCGTGCGCCGCCGCATTGCCGCCAAGAAGCGCCGCAGTGAAGTCA
AATCACTGAGGGGCAGTGTGGATGGGGACGAATAG

Upstream 100 bases:

>100_bases
TTTGCCAGTGACAGGCGAGCTGGGATATCCAGCATTGCAGGTTGATTTGTGCGGGAGTTTGCCTGAACTCCCGCTGAACA
TAGCCTTCAGGAATCGGGTC

Downstream 100 bases:

>100_bases
GCCGGCATCGGCCCGCGCGCAGGGAATTGCGGCGATCTGTGTTCCTGTGCTCTGCTTTATCGACTAAACGCAATTTTTCG
CAGAGTTGATTTGTTTGAAT

Product: peptidyl-tRNA hydrolase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MAEFGDLRISDAITVPAWELSEAFVRASGPGGQNVNKVSSAVQLTWHVQASSLPAPVKERFAKLFASRITADGRLMLEAS
EHRSQVLNRTAARERLAEMILKASVPPKRRVKTKPTAGSVRRRIAAKKRRSEVKSLRGSVDGDE

Sequences:

>Translated_144_residues
MAEFGDLRISDAITVPAWELSEAFVRASGPGGQNVNKVSSAVQLTWHVQASSLPAPVKERFAKLFASRITADGRLMLEAS
EHRSQVLNRTAARERLAEMILKASVPPKRRVKTKPTAGSVRRRIAAKKRRSEVKSLRGSVDGDE
>Mature_143_residues
AEFGDLRISDAITVPAWELSEAFVRASGPGGQNVNKVSSAVQLTWHVQASSLPAPVKERFAKLFASRITADGRLMLEASE
HRSQVLNRTAARERLAEMILKASVPPKRRVKTKPTAGSVRRRIAAKKRRSEVKSLRGSVDGDE

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Homo sapiens, GI4557657, Length=136, Percent_Identity=32.3529411764706, Blast_Score=63, Evalue=7e-11,
Organism=Escherichia coli, GI1786389, Length=132, Percent_Identity=43.9393939393939, Blast_Score=104, Evalue=2e-24,
Organism=Drosophila melanogaster, GI19921098, Length=136, Percent_Identity=33.0882352941176, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15804; Mature: 15673

Theoretical pI: Translated: 11.67; Mature: 11.67

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEFGDLRISDAITVPAWELSEAFVRASGPGGQNVNKVSSAVQLTWHVQASSLPAPVKER
CCCCCCEEECCCEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEEEECCCCCCHHHHH
FAKLFASRITADGRLMLEASEHRSQVLNRTAARERLAEMILKASVPPKRRVKTKPTAGSV
HHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
RRRIAAKKRRSEVKSLRGSVDGDE
HHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AEFGDLRISDAITVPAWELSEAFVRASGPGGQNVNKVSSAVQLTWHVQASSLPAPVKER
CCCCCEEECCCEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEEEECCCCCCHHHHH
FAKLFASRITADGRLMLEASEHRSQVLNRTAARERLAEMILKASVPPKRRVKTKPTAGSV
HHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
RRRIAAKKRRSEVKSLRGSVDGDE
HHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]