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The map label for this gene is ytfH [C]

Identifier: 114797163

GI number: 114797163

Start: 2452108

End: 2452590

Strand: Reverse

Name: ytfH [C]

Synonym: HNE_2352

Alternate gene names: 114797163

Gene position: 2452590-2452108 (Counterclockwise)

Preceding gene: 114800331

Following gene: 114800117

Centisome position: 66.2

GC content: 62.73

Gene sequence:

>483_bases
ATGAAGTGGCAGGAACTTGATCGGGAAAATTGCTCGCTGGCCCGGGCGATGGCGGTGGTGGGCGACCGGTGGACGTTGCT
TGTGCTGCGCGAAGCGTTTCTTCGCGTGCGCCGGTTTGATGACTTTCAGGAACGGCTGGGCATTGCGCGGCGGGTGCTGA
CCGAGCGGCTGAAGCATCTGGTCGATCATGGCGTGCTGGAGAAGGTGGCTTACAGCCAAACCCCCTTGCGGCACGAATAC
CGGCTCACTGAGAAAGGTCTTGCGCTTTATCCGGTCATTATAAGCCTCGTACACTGGGGCGACGCATATTATGCCGGCAA
GAAAGGCCCGCCCGTGCTTCACCGGCACCAGGCTTGCGGGCATGATTTCCGGAGCGTGCTGACCTGCTCGGAATGCGGGG
AGGCGCTGGACCCGAGAGAAGTGTCGCCCCACGCCGGCCCAGGCGCTCGCAAGGGCGATTGGGCGGAGCGGCTGACTGAC
TGA

Upstream 100 bases:

>100_bases
GCGTTTCTGTCCGGTCGTTTCTGGTCTGGCATTTTTGCCTCCCTCTTTTTCCGATGAGTAAGTCTTGAAATAAGACCAAG
TCAATGATAAAAAGCGATGC

Downstream 100 bases:

>100_bases
GTGGGTTGACTAAACCGCCCGCGACGCCATCTTGGCGGGTATGAGGCACCCAAAAGCCCTTATTTTTCTTTCCGCTGCGC
GTGCTGCTGCACGCTGCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MKWQELDRENCSLARAMAVVGDRWTLLVLREAFLRVRRFDDFQERLGIARRVLTERLKHLVDHGVLEKVAYSQTPLRHEY
RLTEKGLALYPVIISLVHWGDAYYAGKKGPPVLHRHQACGHDFRSVLTCSECGEALDPREVSPHAGPGARKGDWAERLTD

Sequences:

>Translated_160_residues
MKWQELDRENCSLARAMAVVGDRWTLLVLREAFLRVRRFDDFQERLGIARRVLTERLKHLVDHGVLEKVAYSQTPLRHEY
RLTEKGLALYPVIISLVHWGDAYYAGKKGPPVLHRHQACGHDFRSVLTCSECGEALDPREVSPHAGPGARKGDWAERLTD
>Mature_160_residues
MKWQELDRENCSLARAMAVVGDRWTLLVLREAFLRVRRFDDFQERLGIARRVLTERLKHLVDHGVLEKVAYSQTPLRHEY
RLTEKGLALYPVIISLVHWGDAYYAGKKGPPVLHRHQACGHDFRSVLTCSECGEALDPREVSPHAGPGARKGDWAERLTD

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 18355; Mature: 18355

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWQELDRENCSLARAMAVVGDRWTLLVLREAFLRVRRFDDFQERLGIARRVLTERLKHL
CCCHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDHGVLEKVAYSQTPLRHEYRLTEKGLALYPVIISLVHWGDAYYAGKKGPPVLHRHQACG
HHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHH
HDFRSVLTCSECGEALDPREVSPHAGPGARKGDWAERLTD
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCC
>Mature Secondary Structure
MKWQELDRENCSLARAMAVVGDRWTLLVLREAFLRVRRFDDFQERLGIARRVLTERLKHL
CCCHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDHGVLEKVAYSQTPLRHEYRLTEKGLALYPVIISLVHWGDAYYAGKKGPPVLHRHQACG
HHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHH
HDFRSVLTCSECGEALDPREVSPHAGPGARKGDWAERLTD
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]