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The map label for this gene is ydiY [C]

Identifier: 114797155

GI number: 114797155

Start: 2837792

End: 2838541

Strand: Reverse

Name: ydiY [C]

Synonym: HNE_2677

Alternate gene names: 114797155

Gene position: 2838541-2837792 (Counterclockwise)

Preceding gene: 114800081

Following gene: 114800013

Centisome position: 76.61

GC content: 58.8

Gene sequence:

>750_bases
ATGAGGACCATTCTTGCCACCATCGCCGCCGGTAGTTTTCTGGCGCTGTCCGCCCAGGCACAGGAACAGGAAAGCCAGTT
GAAAGGCGAAGGGTCGCTCAGCGCGGGCCTGAACACAGGCAACACCGAAACCAGTGATCTGGGGATCGGTGTGAAGATGA
GCCATGAGAGCCAGATCTGGCGCAACAGTGTCGAGCTGGTCGCAGACTATGGCACCGAGGATGGCAACGAGACCAAAAAC
CGTGTGTTTTTTGCCGGTCAGTCCGATCGCACACTCAGTGACCGGCTGTTCGCATTCGGCCGGCTGTCGCATGAAGTTGA
CGAGTTTTCGGGCTTCGACAGCCGCTCCTTTGCCGGTGGTGGTCTTGGCTGGCAAATATTCCAGGATGGGCCGGCGATCT
GGTCGGTTGAAGGGGGCCCCGGTATCAAGTTTGACCGGATTTCGGCGTCAACAACCGGGACACCGCCCGTGGTCGTTCCG
GCTGAATCTGAAGAATCCTTCTCGGCCATCGCGACATCGAAGTTTGGGTATACGTTCAATGAGGCCGTGAAGTTCGGCAA
CGACACCAATGTCATCTATGCCGACACCTCGACGCAGATCGGCAACAAGACGACCCTGACGGCGCTGCTGACCAAGAGCC
TGTCGGCGCGGGTGTCGTTTGAGGTGCGCCATGAGACCGACCCACAGTCCGGCTTTGAGCCGACCGATACAGCAACGCGT
GTGTCTCTGGTCTATGCGTTTGGCGGCTAG

Upstream 100 bases:

>100_bases
TGAAAAAAGCGTTCGACTCTCTGCCCCCATTCAAGTTCTGACACCTGTGTGGCGGGAAAAGCCTGCCGCATGAGTCGAAA
CAGAACAGGGAGGAGCCTCT

Downstream 100 bases:

>100_bases
GCCGGTTTGCTGAACACGATCGCGGCGTTGCCGAAGGGGGCTCGGTAACGCGCGAGGCGTTCGGCGCTGATCGTGCGCAG
GCCCATCACGGGCTCCATCA

Product: hypothetical protein

Products: NA

Alternate protein names: Salt-Stress Induced Outer Membrane Protein

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MRTILATIAAGSFLALSAQAQEQESQLKGEGSLSAGLNTGNTETSDLGIGVKMSHESQIWRNSVELVADYGTEDGNETKN
RVFFAGQSDRTLSDRLFAFGRLSHEVDEFSGFDSRSFAGGGLGWQIFQDGPAIWSVEGGPGIKFDRISASTTGTPPVVVP
AESEESFSAIATSKFGYTFNEAVKFGNDTNVIYADTSTQIGNKTTLTALLTKSLSARVSFEVRHETDPQSGFEPTDTATR
VSLVYAFGG

Sequences:

>Translated_249_residues
MRTILATIAAGSFLALSAQAQEQESQLKGEGSLSAGLNTGNTETSDLGIGVKMSHESQIWRNSVELVADYGTEDGNETKN
RVFFAGQSDRTLSDRLFAFGRLSHEVDEFSGFDSRSFAGGGLGWQIFQDGPAIWSVEGGPGIKFDRISASTTGTPPVVVP
AESEESFSAIATSKFGYTFNEAVKFGNDTNVIYADTSTQIGNKTTLTALLTKSLSARVSFEVRHETDPQSGFEPTDTATR
VSLVYAFGG
>Mature_249_residues
MRTILATIAAGSFLALSAQAQEQESQLKGEGSLSAGLNTGNTETSDLGIGVKMSHESQIWRNSVELVADYGTEDGNETKN
RVFFAGQSDRTLSDRLFAFGRLSHEVDEFSGFDSRSFAGGGLGWQIFQDGPAIWSVEGGPGIKFDRISASTTGTPPVVVP
AESEESFSAIATSKFGYTFNEAVKFGNDTNVIYADTSTQIGNKTTLTALLTKSLSARVSFEVRHETDPQSGFEPTDTATR
VSLVYAFGG

Specific function: Unknown

COG id: COG3137

COG function: function code M; Putative salt-induced outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788016, Length=268, Percent_Identity=24.6268656716418, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26581; Mature: 26581

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTILATIAAGSFLALSAQAQEQESQLKGEGSLSAGLNTGNTETSDLGIGVKMSHESQIW
CCEEEEEHHCCCEEEEECHHHHHHHHHCCCCCEECCCCCCCCCCCCCEEEEEECCHHHHH
RNSVELVADYGTEDGNETKNRVFFAGQSDRTLSDRLFAFGRLSHEVDEFSGFDSRSFAGG
HHHEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GLGWQIFQDGPAIWSVEGGPGIKFDRISASTTGTPPVVVPAESEESFSAIATSKFGYTFN
CCCEEEEECCCEEEEECCCCCCEEEEEECCCCCCCCEEEECCCCCCHHHEEHHCCCCCHH
EAVKFGNDTNVIYADTSTQIGNKTTLTALLTKSLSARVSFEVRHETDPQSGFEPTDTATR
HHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCEEEEEEEEECCCCCCCCCCCCCCEE
VSLVYAFGG
EEEEEEECC
>Mature Secondary Structure
MRTILATIAAGSFLALSAQAQEQESQLKGEGSLSAGLNTGNTETSDLGIGVKMSHESQIW
CCEEEEEHHCCCEEEEECHHHHHHHHHCCCCCEECCCCCCCCCCCCCEEEEEECCHHHHH
RNSVELVADYGTEDGNETKNRVFFAGQSDRTLSDRLFAFGRLSHEVDEFSGFDSRSFAGG
HHHEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GLGWQIFQDGPAIWSVEGGPGIKFDRISASTTGTPPVVVPAESEESFSAIATSKFGYTFN
CCCEEEEECCCEEEEECCCCCCEEEEEECCCCCCCCEEEECCCCCCHHHEEHHCCCCCHH
EAVKFGNDTNVIYADTSTQIGNKTTLTALLTKSLSARVSFEVRHETDPQSGFEPTDTATR
HHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCEEEEEEEEECCCCCCCCCCCCCCEE
VSLVYAFGG
EEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA