Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114797062

Identifier: 114797062

GI number: 114797062

Start: 595591

End: 596811

Strand: Reverse

Name: 114797062

Synonym: HNE_0600

Alternate gene names: NA

Gene position: 596811-595591 (Counterclockwise)

Preceding gene: 114798615

Following gene: 114800088

Centisome position: 16.11

GC content: 67.98

Gene sequence:

>1221_bases
ATGCGACGCACCCATCTTGCGGCCTTGACCGGCCTAGCCCTCATTCTTGCCGCCTGCGATCAGGTGCGGCTGCCGGGGCT
GAACCCGGTTGAGCCGGAGCTTTCGGCAGAACCTAAAGGCAGCGCCGCCGGTGATGCGGTAGGCGGTTATACCGAGGCCG
ACCTGCAACCGACGCCGGAAGAAATCGAAGCCGAGCGCGCCGAAACCACGCGGATCGCCGCAGAAACAGCCGTGGCAGCG
CCAGCGCCCGCCGCCCCGCTGGAAACGCCTGCTGCGGGCGCGACGGCCATGCCGGAAGACGAGAGCGCCCCTGCCCCGGC
GGCGGACACCGCAGCCTTGCCCCCTGACGCGGCGCTGGCGACATCCCTTGGCATCGTCAATGCCAGCCGGTGCATCCTGC
CAAGCGGCGCGCCGGCCACCCCGACCGTGGCGAAGGCCGCCGGAGCAACCGAGCTGGAAGAACCGGTGATGGGCACCGAA
GCGGTCAATGCGCTGGCCGCCAGCCTCAGCGCCTTTCCCGGCATCGTGAAGATCGAGCCGCGCCGGGCCGAGCCGACGGG
CGTGGTGGCGAGCGGGCATTGCGGGGCCGTGCGCGTGGCGCGCAACTGGTTTGTGACCGCCGCCCATTGCATTGACGAGC
CGTTTGACGAGATCCGCGTGATCGGCGAAGCGGCCAATCTGCGCAGCCCGGAAGCCAAGCGCGCCTCGGCAGACTATGCC
GTGTGCCATGCCGGCTATCAGGGGACGGACAATGGCTATGCCAATGACATTGCGCTGGTGCGCCTGAGCGAGGAACAGGT
GGCAGGCTTTGCCAATGTGCCGGTGGCGCGGTTTGGCGCAACGGCCCAGGCGCTGGCACCGGCGAACTACCCGGTAGCGG
AAATGGCCGGCTGGGGGCTGACCCGGTTTGACGGGGAGCTGTCCAACGAGCTGCTGACGACGCGCCTGAAGATCCTGAGC
GCGGGGCCTGCGGCGATCACCGTGACCAGCGAGAATGGCGCGGGGCCGTGTATCGGAGACAGCGGCGGGCCGCTCTATGT
GACCGAGGCCGATGGCAGCAAGACCGTGGTGGGCATTCTCTCCGTAGTCGAACAGAACCGGACGACCGGGCATTTCTGCG
AGGGCGAGTATAATGGCCGCTATATCAACCTTCAGGGCTATGCGGGCTGGATGACGTCGGTGATGGCGCTCTGCGAAGAT
GAGGGCGCCGCCTGCCGTTGA

Upstream 100 bases:

>100_bases
TTTGAGCGCGGAACCGCCCGGCGGTGCGGGGGCGGTTGACCCCGCCGCCTGCCAGCCCCTTTATGAGTGCGCGCGATGCT
TTCAGAAGGGGACCATTGGA

Downstream 100 bases:

>100_bases
GACAGGTGGACGCGGCCGCCTGCGGGGCTATATGGTCTGGCAGCATGACAGGCCTTTACCCCTATGAATAATCGGCTTTT
TCCGCTCCTGATTTTCCTGC

Product: trypsin domain-containing protein

Products: NA

Alternate protein names: Trypsin Domain-Containing Protein

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MRRTHLAALTGLALILAACDQVRLPGLNPVEPELSAEPKGSAAGDAVGGYTEADLQPTPEEIEAERAETTRIAAETAVAA
PAPAAPLETPAAGATAMPEDESAPAPAADTAALPPDAALATSLGIVNASRCILPSGAPATPTVAKAAGATELEEPVMGTE
AVNALAASLSAFPGIVKIEPRRAEPTGVVASGHCGAVRVARNWFVTAAHCIDEPFDEIRVIGEAANLRSPEAKRASADYA
VCHAGYQGTDNGYANDIALVRLSEEQVAGFANVPVARFGATAQALAPANYPVAEMAGWGLTRFDGELSNELLTTRLKILS
AGPAAITVTSENGAGPCIGDSGGPLYVTEADGSKTVVGILSVVEQNRTTGHFCEGEYNGRYINLQGYAGWMTSVMALCED
EGAACR

Sequences:

>Translated_406_residues
MRRTHLAALTGLALILAACDQVRLPGLNPVEPELSAEPKGSAAGDAVGGYTEADLQPTPEEIEAERAETTRIAAETAVAA
PAPAAPLETPAAGATAMPEDESAPAPAADTAALPPDAALATSLGIVNASRCILPSGAPATPTVAKAAGATELEEPVMGTE
AVNALAASLSAFPGIVKIEPRRAEPTGVVASGHCGAVRVARNWFVTAAHCIDEPFDEIRVIGEAANLRSPEAKRASADYA
VCHAGYQGTDNGYANDIALVRLSEEQVAGFANVPVARFGATAQALAPANYPVAEMAGWGLTRFDGELSNELLTTRLKILS
AGPAAITVTSENGAGPCIGDSGGPLYVTEADGSKTVVGILSVVEQNRTTGHFCEGEYNGRYINLQGYAGWMTSVMALCED
EGAACR
>Mature_406_residues
MRRTHLAALTGLALILAACDQVRLPGLNPVEPELSAEPKGSAAGDAVGGYTEADLQPTPEEIEAERAETTRIAAETAVAA
PAPAAPLETPAAGATAMPEDESAPAPAADTAALPPDAALATSLGIVNASRCILPSGAPATPTVAKAAGATELEEPVMGTE
AVNALAASLSAFPGIVKIEPRRAEPTGVVASGHCGAVRVARNWFVTAAHCIDEPFDEIRVIGEAANLRSPEAKRASADYA
VCHAGYQGTDNGYANDIALVRLSEEQVAGFANVPVARFGATAQALAPANYPVAEMAGWGLTRFDGELSNELLTTRLKILS
AGPAAITVTSENGAGPCIGDSGGPLYVTEADGSKTVVGILSVVEQNRTTGHFCEGEYNGRYINLQGYAGWMTSVMALCED
EGAACR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI24639096, Length=218, Percent_Identity=31.651376146789, Blast_Score=68, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24650931, Length=251, Percent_Identity=28.6852589641434, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41487; Mature: 41487

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00134 TRYPSIN_HIS ; PS00135 TRYPSIN_SER ; PS50240 TRYPSIN_DOM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRTHLAALTGLALILAACDQVRLPGLNPVEPELSAEPKGSAAGDAVGGYTEADLQPTPE
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
EIEAERAETTRIAAETAVAAPAPAAPLETPAAGATAMPEDESAPAPAADTAALPPDAALA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
TSLGIVNASRCILPSGAPATPTVAKAAGATELEEPVMGTEAVNALAASLSAFPGIVKIEP
HHHHHCCCCEEECCCCCCCCCHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHCCCEEEECC
RRAEPTGVVASGHCGAVRVARNWFVTAAHCIDEPFDEIRVIGEAANLRSPEAKRASADYA
CCCCCCCEEECCCCCEEEEEHHHHEEHHHHHCCCHHHHHHHHHHHCCCCCCHHHCCCCEE
VCHAGYQGTDNGYANDIALVRLSEEQVAGFANVPVARFGATAQALAPANYPVAEMAGWGL
EEECCCCCCCCCCCCCEEEEEECHHHHCCCCCCCHHHHCCCHHHHCCCCCCHHHHCCCCC
TRFDGELSNELLTTRLKILSAGPAAITVTSENGAGPCIGDSGGPLYVTEADGSKTVVGIL
EECCCHHHHHHHHHHHHHEECCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCHHHHHH
SVVEQNRTTGHFCEGEYNGRYINLQGYAGWMTSVMALCEDEGAACR
HHHHCCCCCCCEECCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRRTHLAALTGLALILAACDQVRLPGLNPVEPELSAEPKGSAAGDAVGGYTEADLQPTPE
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
EIEAERAETTRIAAETAVAAPAPAAPLETPAAGATAMPEDESAPAPAADTAALPPDAALA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
TSLGIVNASRCILPSGAPATPTVAKAAGATELEEPVMGTEAVNALAASLSAFPGIVKIEP
HHHHHCCCCEEECCCCCCCCCHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHCCCEEEECC
RRAEPTGVVASGHCGAVRVARNWFVTAAHCIDEPFDEIRVIGEAANLRSPEAKRASADYA
CCCCCCCEEECCCCCEEEEEHHHHEEHHHHHCCCHHHHHHHHHHHCCCCCCHHHCCCCEE
VCHAGYQGTDNGYANDIALVRLSEEQVAGFANVPVARFGATAQALAPANYPVAEMAGWGL
EEECCCCCCCCCCCCCEEEEEECHHHHCCCCCCCHHHHCCCHHHHCCCCCCHHHHCCCCC
TRFDGELSNELLTTRLKILSAGPAAITVTSENGAGPCIGDSGGPLYVTEADGSKTVVGIL
EECCCHHHHHHHHHHHHHEECCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCHHHHHH
SVVEQNRTTGHFCEGEYNGRYINLQGYAGWMTSVMALCEDEGAACR
HHHHCCCCCCCEECCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA