| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797062
Identifier: 114797062
GI number: 114797062
Start: 595591
End: 596811
Strand: Reverse
Name: 114797062
Synonym: HNE_0600
Alternate gene names: NA
Gene position: 596811-595591 (Counterclockwise)
Preceding gene: 114798615
Following gene: 114800088
Centisome position: 16.11
GC content: 67.98
Gene sequence:
>1221_bases ATGCGACGCACCCATCTTGCGGCCTTGACCGGCCTAGCCCTCATTCTTGCCGCCTGCGATCAGGTGCGGCTGCCGGGGCT GAACCCGGTTGAGCCGGAGCTTTCGGCAGAACCTAAAGGCAGCGCCGCCGGTGATGCGGTAGGCGGTTATACCGAGGCCG ACCTGCAACCGACGCCGGAAGAAATCGAAGCCGAGCGCGCCGAAACCACGCGGATCGCCGCAGAAACAGCCGTGGCAGCG CCAGCGCCCGCCGCCCCGCTGGAAACGCCTGCTGCGGGCGCGACGGCCATGCCGGAAGACGAGAGCGCCCCTGCCCCGGC GGCGGACACCGCAGCCTTGCCCCCTGACGCGGCGCTGGCGACATCCCTTGGCATCGTCAATGCCAGCCGGTGCATCCTGC CAAGCGGCGCGCCGGCCACCCCGACCGTGGCGAAGGCCGCCGGAGCAACCGAGCTGGAAGAACCGGTGATGGGCACCGAA GCGGTCAATGCGCTGGCCGCCAGCCTCAGCGCCTTTCCCGGCATCGTGAAGATCGAGCCGCGCCGGGCCGAGCCGACGGG CGTGGTGGCGAGCGGGCATTGCGGGGCCGTGCGCGTGGCGCGCAACTGGTTTGTGACCGCCGCCCATTGCATTGACGAGC CGTTTGACGAGATCCGCGTGATCGGCGAAGCGGCCAATCTGCGCAGCCCGGAAGCCAAGCGCGCCTCGGCAGACTATGCC GTGTGCCATGCCGGCTATCAGGGGACGGACAATGGCTATGCCAATGACATTGCGCTGGTGCGCCTGAGCGAGGAACAGGT GGCAGGCTTTGCCAATGTGCCGGTGGCGCGGTTTGGCGCAACGGCCCAGGCGCTGGCACCGGCGAACTACCCGGTAGCGG AAATGGCCGGCTGGGGGCTGACCCGGTTTGACGGGGAGCTGTCCAACGAGCTGCTGACGACGCGCCTGAAGATCCTGAGC GCGGGGCCTGCGGCGATCACCGTGACCAGCGAGAATGGCGCGGGGCCGTGTATCGGAGACAGCGGCGGGCCGCTCTATGT GACCGAGGCCGATGGCAGCAAGACCGTGGTGGGCATTCTCTCCGTAGTCGAACAGAACCGGACGACCGGGCATTTCTGCG AGGGCGAGTATAATGGCCGCTATATCAACCTTCAGGGCTATGCGGGCTGGATGACGTCGGTGATGGCGCTCTGCGAAGAT GAGGGCGCCGCCTGCCGTTGA
Upstream 100 bases:
>100_bases TTTGAGCGCGGAACCGCCCGGCGGTGCGGGGGCGGTTGACCCCGCCGCCTGCCAGCCCCTTTATGAGTGCGCGCGATGCT TTCAGAAGGGGACCATTGGA
Downstream 100 bases:
>100_bases GACAGGTGGACGCGGCCGCCTGCGGGGCTATATGGTCTGGCAGCATGACAGGCCTTTACCCCTATGAATAATCGGCTTTT TCCGCTCCTGATTTTCCTGC
Product: trypsin domain-containing protein
Products: NA
Alternate protein names: Trypsin Domain-Containing Protein
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MRRTHLAALTGLALILAACDQVRLPGLNPVEPELSAEPKGSAAGDAVGGYTEADLQPTPEEIEAERAETTRIAAETAVAA PAPAAPLETPAAGATAMPEDESAPAPAADTAALPPDAALATSLGIVNASRCILPSGAPATPTVAKAAGATELEEPVMGTE AVNALAASLSAFPGIVKIEPRRAEPTGVVASGHCGAVRVARNWFVTAAHCIDEPFDEIRVIGEAANLRSPEAKRASADYA VCHAGYQGTDNGYANDIALVRLSEEQVAGFANVPVARFGATAQALAPANYPVAEMAGWGLTRFDGELSNELLTTRLKILS AGPAAITVTSENGAGPCIGDSGGPLYVTEADGSKTVVGILSVVEQNRTTGHFCEGEYNGRYINLQGYAGWMTSVMALCED EGAACR
Sequences:
>Translated_406_residues MRRTHLAALTGLALILAACDQVRLPGLNPVEPELSAEPKGSAAGDAVGGYTEADLQPTPEEIEAERAETTRIAAETAVAA PAPAAPLETPAAGATAMPEDESAPAPAADTAALPPDAALATSLGIVNASRCILPSGAPATPTVAKAAGATELEEPVMGTE AVNALAASLSAFPGIVKIEPRRAEPTGVVASGHCGAVRVARNWFVTAAHCIDEPFDEIRVIGEAANLRSPEAKRASADYA VCHAGYQGTDNGYANDIALVRLSEEQVAGFANVPVARFGATAQALAPANYPVAEMAGWGLTRFDGELSNELLTTRLKILS AGPAAITVTSENGAGPCIGDSGGPLYVTEADGSKTVVGILSVVEQNRTTGHFCEGEYNGRYINLQGYAGWMTSVMALCED EGAACR >Mature_406_residues MRRTHLAALTGLALILAACDQVRLPGLNPVEPELSAEPKGSAAGDAVGGYTEADLQPTPEEIEAERAETTRIAAETAVAA PAPAAPLETPAAGATAMPEDESAPAPAADTAALPPDAALATSLGIVNASRCILPSGAPATPTVAKAAGATELEEPVMGTE AVNALAASLSAFPGIVKIEPRRAEPTGVVASGHCGAVRVARNWFVTAAHCIDEPFDEIRVIGEAANLRSPEAKRASADYA VCHAGYQGTDNGYANDIALVRLSEEQVAGFANVPVARFGATAQALAPANYPVAEMAGWGLTRFDGELSNELLTTRLKILS AGPAAITVTSENGAGPCIGDSGGPLYVTEADGSKTVVGILSVVEQNRTTGHFCEGEYNGRYINLQGYAGWMTSVMALCED EGAACR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24639096, Length=218, Percent_Identity=31.651376146789, Blast_Score=68, Evalue=9e-12, Organism=Drosophila melanogaster, GI24650931, Length=251, Percent_Identity=28.6852589641434, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41487; Mature: 41487
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00134 TRYPSIN_HIS ; PS00135 TRYPSIN_SER ; PS50240 TRYPSIN_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTHLAALTGLALILAACDQVRLPGLNPVEPELSAEPKGSAAGDAVGGYTEADLQPTPE CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH EIEAERAETTRIAAETAVAAPAPAAPLETPAAGATAMPEDESAPAPAADTAALPPDAALA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH TSLGIVNASRCILPSGAPATPTVAKAAGATELEEPVMGTEAVNALAASLSAFPGIVKIEP HHHHHCCCCEEECCCCCCCCCHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHCCCEEEECC RRAEPTGVVASGHCGAVRVARNWFVTAAHCIDEPFDEIRVIGEAANLRSPEAKRASADYA CCCCCCCEEECCCCCEEEEEHHHHEEHHHHHCCCHHHHHHHHHHHCCCCCCHHHCCCCEE VCHAGYQGTDNGYANDIALVRLSEEQVAGFANVPVARFGATAQALAPANYPVAEMAGWGL EEECCCCCCCCCCCCCEEEEEECHHHHCCCCCCCHHHHCCCHHHHCCCCCCHHHHCCCCC TRFDGELSNELLTTRLKILSAGPAAITVTSENGAGPCIGDSGGPLYVTEADGSKTVVGIL EECCCHHHHHHHHHHHHHEECCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCHHHHHH SVVEQNRTTGHFCEGEYNGRYINLQGYAGWMTSVMALCEDEGAACR HHHHCCCCCCCEECCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRRTHLAALTGLALILAACDQVRLPGLNPVEPELSAEPKGSAAGDAVGGYTEADLQPTPE CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH EIEAERAETTRIAAETAVAAPAPAAPLETPAAGATAMPEDESAPAPAADTAALPPDAALA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH TSLGIVNASRCILPSGAPATPTVAKAAGATELEEPVMGTEAVNALAASLSAFPGIVKIEP HHHHHCCCCEEECCCCCCCCCHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHCCCEEEECC RRAEPTGVVASGHCGAVRVARNWFVTAAHCIDEPFDEIRVIGEAANLRSPEAKRASADYA CCCCCCCEEECCCCCEEEEEHHHHEEHHHHHCCCHHHHHHHHHHHCCCCCCHHHCCCCEE VCHAGYQGTDNGYANDIALVRLSEEQVAGFANVPVARFGATAQALAPANYPVAEMAGWGL EEECCCCCCCCCCCCCEEEEEECHHHHCCCCCCCHHHHCCCHHHHCCCCCCHHHHCCCCC TRFDGELSNELLTTRLKILSAGPAAITVTSENGAGPCIGDSGGPLYVTEADGSKTVVGIL EECCCHHHHHHHHHHHHHEECCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCHHHHHH SVVEQNRTTGHFCEGEYNGRYINLQGYAGWMTSVMALCEDEGAACR HHHHCCCCCCCEECCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA