Definition Syntrophomonas wolfei subsp. wolfei str. Goettingen chromosome, complete genome.
Accession NC_008346
Length 2,936,195

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Identifier: 114566067

GI number:

Start: 610339

End: 613686

Strand: Direct

Name: Not Available

Synonym: Swol_0516

Alternate gene names: NA

Gene position: NA

Preceding gene: 114566066

Following gene: 114566068

Centisome position: NA

GC content: NA

Gene sequence:

>3348_bases
TTGTCTGCAAACTTTGATTTCCTAAAGGGGCAAGCCGAATATACCCTGTTTGCTACTGCTTGTATTGAAGCGGAGCGTGT
GTTGGCTACCTCTCCAGCAATGGCAGCTATGGGGAGCCGGAAAGCCTGCGAACTTGCTGTAAAGTGGGTGTATTCTGCCG
ATAATACTATTACTATGCCTTACAGGGATAATTTGCAGTCATTGATTCACGAACCCTCTTTTAGATTCGTTCTTGATAAC
CAGACATGGAGCAAGCTGCTCTATATTATTAAGCTGGGCAACCTTGCCGTACATACGGAAAAAGCCATCAGTCGCAGTGA
TGCCGTCCTATCTCTTTCTTTCTTGTTTGAATTTATACAATGGATTGATTACTGCTACGGGTTTAATTATGTAGAACGCA
GCTTTGATGAAGCAAAAATTCCGGCAGAACAGGTAATCCTTGATGTAACCAAACTCAAAGAAATAGATAGCTTGATTGAT
CAAAAAGATACTGAAATAGAAGCCCTACGTGCCAAGATTGAGGCGATGAGCCCACAGCTTACCGCTGATAAAGAACACCA
TAAGGAAGAACGCCATTTTACTCCATTGGATATTTCGGAACTTCTTACCCGTAAGAAGTATATTGATGTGGACTTAAAGC
TCCTGGGTTGGGTATTTGGTGATGATGTGCAGGAAGAAGTGGAGCTTTACGGTATGCCAAATCCGGAAGGAAAAGGCTAT
GCCGATTATGTACTGTATGGCAAAGATGGACTGCCCCTTGCCGTAATTGAAGCGAAACGCACTTCAAAGGACCCGAAGAT
TGGTACCCAGCAGGCCAAATTATATGCTGACTGCCTGGAAAAGATGACCGGCAGAAGACCCATGATGTTTACCACCAATG
GCTTTGAAACGTACTTGTGGGATGATTTAACTTCTCCGCAGCGTAAGGTGAGTGGAGTCTTCTCCAAAGCCGATCTTGAA
AAGCTGATGAACCGAAGGAATGAACGTAAACCTTTGGATGAAATACCGATAGACGATAAAATAACTGATCGTTACTACCA
AAAAGAAGCCATCCGGGCAGTATGTGAAAACATTGAAACAGGTCATCGCAAATCATTGCTTGTCATGGCGACCGGTACGG
GGAAAACTAGAACCGCTTCCAGTCTAACCGATGTCTTATCCCGGGGTGGATATATAACTAATACCTTATTTTTAGCTGAT
CGTACTGCCTTGGTCAGGCAGGCTAAGAATGATTTTAAAACTAATTTGCCGGATATGTCCCTATGTAATCTATTAATCAA
TAAGGAGGACAAAACAGCCCGCATAGTATTTTCAACCTACCCTACTATGCTAAATGCAATTGATTCAGCCAAGAACGAAA
ATGGGCAGCGGCTGTTTACCCCTGCCCATTTTGATTTAATTATAGTAGATGAAGCCCACCGCAGTATCTTTAAAAAATAT
CGTGCTATCTTTGAGTATTTTGACAGTATGCTGATTGGTTTAACAGCTACACCCAAGCAAGAAGTGGACCGCAACACCTA
TGACTTTTTTGAGATGGAAAGCGGTGTGCCGACCTATGCTTATGCCTATGAAACTGCTGTAGATAAAGATCATGTCTTAG
TGCCTTACCACAATATTGAGGTTAGAACCAGGTTCCTGGAAGAGGGCATAACTTACGACGAACTATCCGAGGAAGATAAG
GCACGCTATGAAGAAGATTTCACAGATGAAGATGGTGAGATGCCTGATTTTATTCCTTCCCCTGCGGTTAATGAGTTCAT
CTTTAACCAATGTACAGTAGATATGGTGTTGGAAGATTTAATGACCAAAGGAATTAAGGTTGCTGGCGGTGACAGGCTGG
GAAAAACCATTATATTTGCACAAAACAAAAAACATGCGGAGTATATCGTTGAGCGTTTTAATAAACTATATCCGCAATAT
CACGGCAGTTTCGCCAAGCGTGTGGTTTGTGATGACAATTATGTACAAACAATTATCGATGATTTCAAAATTGCCGAAAA
AGAGCCCCATATTGCTGTATCGGTGGATATGCTGGATACAGGTATAGATGTTCCAGAGCTGGTTAATTTAGTCTTCTTTA
AACGTATCCGCTCTAAAATAAAATTCTGGCAGATGATTGGCCGGGGTACCAGGCTATGCAAAAATCTATTCGGGGATGGA
CAGGATAAAACCCACTTCCTAATCTTTGATTACCTCGGAAACTTCGAATTTTTCCGTACCAACAAAGACGGCGTGAAAGG
CAACGAAACCCAGAGCATTTCGGAAGCGATCTTTGCTAAACGGGTTCGCTTAATTCATCATCTCCAGCAATCGGCTTTTA
TGGAGGAACCTTATCAGGCCATTCGTACAAATCTTATAGATACTGTCGTACAGCAGATAAACACACTGAATACAGAACTT
ATATCGGTAAAACTGCAGTTACAGTACATTGAGAAATATAAAAATAAGGATGCTTTCGTATTTCTTTCTGACTTAGACAA
ACATGACTTAATTGTTCACCTGGCTCCACTTGTATACATGGATGATATGGATGAGTTTGCCAAACGATTTGACAACTTTA
TGTATGGCCTGATGATTGCTCAAATCGAGGGAGCACCACATTTCAATAAAGGCAAGAAGCAGCTGATCAACGTCTGCAGC
AGCCTTTCACAGCGTATTACTATTCCGCAGATTAAAGAGAAAATAGAGCTTATCAATAATGTTGGTACAGATGATTTCTG
GCAAAATTCTGATATATTAGATTTTGAGAAGGCACGTATTGAACTGCGTAGCCTTATTAAGTTTATTGTTGATGAAGGCG
GAGTTAGCCCAATATATACTAACCTGAACGATATTGTTCTTGAGGTTAAAGAAGGAGAGGGGTTAGACCCCGCCTATACA
TTTGAAGACTATAAACTAAAGGTAAACCGTTATATTGAAGAAAACCGCGATCATATTGCTATTTATAAGCTCCGGAACAA
TATTCCCTTGACTGCTTTCGATTATAATAGCTTGGAGCATATCTTCACTGGGGAACTGGGTACACCAGAAGATTATGAGC
GGGAATACCAGGATACGCCTTTCGGCCTACTGGTACGTAAAATTGCAAAGATGGAATATGAAGCAGCCTGTGCAGCATTT
TCTGAGTTTATCAATGATCAGTCACTAAGCCAGGGACAAATTGTTTTTGTAAAAAAAGTTATCGATTATATCATGCAAAA
CGGCTATATCGAGAATGTATCCACGCTAATGAAGCCACCTTTTGATAAACCTAAGAGTTTTATTAAGCTTTTTGATGGAT
CAAAACAAAAGCAGATTGTAGAGGCAGTTAACCAGGTTAGGGATAATGCGGTTAAGATAGTAGGATAA

Upstream 100 bases:

>100_bases
AAAGTAGTTTTCATTGATTAAGCATCTTTGCCAGTAAATCGCAGTTCTGAATTTAGCAATACTTCCAAGTTCGCTGAATT
TGTAAGGATAGGTGATTTAT

Downstream 100 bases:

>100_bases
GAAAAATATGATTTCAAAAGAAACAATAGGCTTTAAAACGGTAGCTCCCAGGATCCCACACTCTCTCCCCTCCCCAGAAT
TTTCATGTCAGATTAAGGCA

Product: type I restriction-modification system R subunit (endonuclease)

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1115_residues
MSANFDFLKGQAEYTLFATACIEAERVLATSPAMAAMGSRKACELAVKWVYSADNTITMPYRDNLQSLIHEPSFRFVLDN
QTWSKLLYIIKLGNLAVHTEKAISRSDAVLSLSFLFEFIQWIDYCYGFNYVERSFDEAKIPAEQVILDVTKLKEIDSLID
QKDTEIEALRAKIEAMSPQLTADKEHHKEERHFTPLDISELLTRKKYIDVDLKLLGWVFGDDVQEEVELYGMPNPEGKGY
ADYVLYGKDGLPLAVIEAKRTSKDPKIGTQQAKLYADCLEKMTGRRPMMFTTNGFETYLWDDLTSPQRKVSGVFSKADLE
KLMNRRNERKPLDEIPIDDKITDRYYQKEAIRAVCENIETGHRKSLLVMATGTGKTRTASSLTDVLSRGGYITNTLFLAD
RTALVRQAKNDFKTNLPDMSLCNLLINKEDKTARIVFSTYPTMLNAIDSAKNENGQRLFTPAHFDLIIVDEAHRSIFKKY
RAIFEYFDSMLIGLTATPKQEVDRNTYDFFEMESGVPTYAYAYETAVDKDHVLVPYHNIEVRTRFLEEGITYDELSEEDK
ARYEEDFTDEDGEMPDFIPSPAVNEFIFNQCTVDMVLEDLMTKGIKVAGGDRLGKTIIFAQNKKHAEYIVERFNKLYPQY
HGSFAKRVVCDDNYVQTIIDDFKIAEKEPHIAVSVDMLDTGIDVPELVNLVFFKRIRSKIKFWQMIGRGTRLCKNLFGDG
QDKTHFLIFDYLGNFEFFRTNKDGVKGNETQSISEAIFAKRVRLIHHLQQSAFMEEPYQAIRTNLIDTVVQQINTLNTEL
ISVKLQLQYIEKYKNKDAFVFLSDLDKHDLIVHLAPLVYMDDMDEFAKRFDNFMYGLMIAQIEGAPHFNKGKKQLINVCS
SLSQRITIPQIKEKIELINNVGTDDFWQNSDILDFEKARIELRSLIKFIVDEGGVSPIYTNLNDIVLEVKEGEGLDPAYT
FEDYKLKVNRYIEENRDHIAIYKLRNNIPLTAFDYNSLEHIFTGELGTPEDYEREYQDTPFGLLVRKIAKMEYEAACAAF
SEFINDQSLSQGQIVFVKKVIDYIMQNGYIENVSTLMKPPFDKPKSFIKLFDGSKQKQIVEAVNQVRDNAVKIVG

Sequences:
NA

Specific function: NA

COG id: COG4096

COG function: function code V; Type I site-specific restriction-modification system, R (restriction) subunit and related helicases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA