Definition Syntrophomonas wolfei subsp. wolfei str. Goettingen chromosome, complete genome.
Accession NC_008346
Length 2,936,195

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Identifier: 114565821

GI number:

Start: 295471

End: 297276

Strand: Direct

Name: Not Available

Synonym: Swol_0254

Alternate gene names: NA

Gene position: NA

Preceding gene: 114565820

Following gene: 114565822

Centisome position: NA

GC content: NA

Gene sequence:

>1806_bases
ATGGGTGATGAGATGCTGAAGGAAAGATTAAAAAAGGTGCCGCTCCAACCGGGGGTATACTTGTTCAAAAACCAGGAGGG
GCAGGTGCTCTATGTGGGAAAAGCCCGGGTTCTTCGCCAGCGAATGCGCTCCTATTTTCAAGCCCCGGAGCGAATGCATC
CCAAGGTAAAGGCGATGATGGCCTGGGTAAGTGATTTTGACTTTATCGTCACCCACAGTGAAATGGAAGCTCTCATTCTG
GAAAACAACCTTATAAAAAGCTATAAGCCCAGGTATAATATCGATTTGCGCGATGATAAAAGCTATCCTTATATCAAAGT
CACTGTCGCCGATAAATTTCCGCGGGTTTACCTGGCCCGGGAAAAAAAAGACGGAGTATCGCGCTACTTTGGACCTTATA
CCGATGTTACTTCCCTGCGCGATACGCTCAAGCTGCTCAACGGCGTTTTCGGGCTGCGCAGTTGCCGGACTATGAAGTCC
CGGCGCCGGCCCTGTCTCAACCGCGACATGGGTAAATGTCTCTCCCCTTGCAGCGGTGAAATTTCAGAAGAAGAATACAG
CCAGAAGGTTCAAGCCTTAATCACTTTTCTGGAGGGTGATTTTCAAGAGATAGTCCGGGAAAAAGAAAAAGAAATGGCTA
TGGCCGCCAGGAGTCTGGAGTTCGAAAAAGCCGCCCGCCTGCGGGATCAGATCCAATCCCTGCGCCAGTTGGGTGAAAAA
CAAAAGATTGAGCTGGCTTCACCCTATGAACTGGACCTGGTGGGGATGCTAAGCGGGGAAAAGGAGAACCTGGTCCTGGT
TTTTAAAGTCCGTTCGGGAAAGATAGTAGGCAAAGATACTTTCTGGCTGAAGCGCCCTATCCAGGAAGATGAGAATGAGG
CCATGGAATTTTTTATTAAACACTATTATGATGAAAACCCTGATATTCCACCGGAGATACTCTTGAGCCACCTGCCTTCT
GAGTCCAAACTGGTGGAGGCCTGGCTGAAATCCAGGGTCTCCCACCGGGTAGAACTCCGGGTTCCGCAAAGAGGAGAAAA
GAAACAGGTTCTCAATATGCTGCTGGAAAATGCTCGTTTACTCCTGGAGGAAAAGCAGCGGGAAGAGAATAAGCAGCTCG
CCGCTCTCTCGCATTTGGCGCGGGTTCTGGACCTGGAAGTGGTGCCTAATCGCCTGGAATGTTTTGATGTATCTCATCTG
GCCGGGGAGGAAACAGTGGCCTCTATGGTGGTTTTTGTCGGAGGCCAACCGGAGAAAAAGGCTTATCGCCATTTTAAAAT
CAGAACTCAACAGAATAATGATACTGCCTCACTGGCTGAAACCGTTAGAAGGCGTTTGGAGAATGCCCGCCAGGCTAATC
CAGCTTTTTTGCCGGAGCCGGATTTAATACTGGTCGATGGTGGATTAGGACAGGTTAATGCCGTAGCAGCAGTTTTGCAG
GAAATGAATCTGGATATCCCGCTGTTTGCTTTGGCTGAAAAGAATGAGGAGATATACCGGCCAGGTAAAAGCCAGCCACT
GGTATTGGCGGCCCGGGATAATGGACTGCAATTGCTGCAGAGGCTTCGGGATGAAGCCCATCGTTTTGCTATTGAATATA
ACCGGAAGAGAAGGGCAAAAAAAATCAGGTCTTCTGCTCTGGACGAAATACCGGGAATAGGGAAGCAGAGAAAGAAGAAC
CTGCTGGTTCATTTCACTTCGGTGGCCAAAATTAAGGAAGCTTCACTGGATGAAATAGCGGCCGTTCCGGGAATGAACCG
GAAAGCGGCACTGGCGGTAATAGAGTTCTTCCATAATCAGGACTGA

Upstream 100 bases:

>100_bases
AGCGCGGTACCCCTTGAGCCGCGAGACAAGCCGTAGGTGTTGCCCATGCAAAGATTGCGAGCGGTATATTTATACAAGAA
TCGGGGGCATGGGGTGAAGG

Downstream 100 bases:

>100_bases
AAAGTCTAATAAAAATCAAAACCTGGTTAGTATGAAAAGGTCGTCAGTCGTCGGGAGACGGAGGACGGAATGGTCGCCAG
ATGCCAGTGAATGGAAGACG

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>601_residues
MGDEMLKERLKKVPLQPGVYLFKNQEGQVLYVGKARVLRQRMRSYFQAPERMHPKVKAMMAWVSDFDFIVTHSEMEALIL
ENNLIKSYKPRYNIDLRDDKSYPYIKVTVADKFPRVYLAREKKDGVSRYFGPYTDVTSLRDTLKLLNGVFGLRSCRTMKS
RRRPCLNRDMGKCLSPCSGEISEEEYSQKVQALITFLEGDFQEIVREKEKEMAMAARSLEFEKAARLRDQIQSLRQLGEK
QKIELASPYELDLVGMLSGEKENLVLVFKVRSGKIVGKDTFWLKRPIQEDENEAMEFFIKHYYDENPDIPPEILLSHLPS
ESKLVEAWLKSRVSHRVELRVPQRGEKKQVLNMLLENARLLLEEKQREENKQLAALSHLARVLDLEVVPNRLECFDVSHL
AGEETVASMVVFVGGQPEKKAYRHFKIRTQQNNDTASLAETVRRRLENARQANPAFLPEPDLILVDGGLGQVNAVAAVLQ
EMNLDIPLFALAEKNEEIYRPGKSQPLVLAARDNGLQLLQRLRDEAHRFAIEYNRKRRAKKIRSSALDEIPGIGKQRKKN
LLVHFTSVAKIKEASLDEIAAVPGMNRKAALAVIEFFHNQD

Sequences:
NA

Specific function: NA

COG id: COG0322

COG function: function code L; Nuclease subunit of the excinuclease complex

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA