Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114565037

GI number:

Start: 4639521

End: 4642574

Strand: Reverse

Name: Not Available

Synonym: Sfri_3887

Alternate gene names: NA

Gene position: NA

Preceding gene: 114565038

Following gene: 114565036

Centisome position: NA

GC content: NA

Gene sequence:

>3054_bases
ATGCTGACATCGGTGATCCGATTTTCGCTTACTCAGCGTTTATTTGTGTTAATTGTGGCGCTGTTTCTAATGTTAGCCGG
TGTTCGTTCTTGGTATTCCATTCCATTAGATGCCTTTCCTGATATTTCGCCAACACAAGTGAAAATCATCTTAAAAGCGC
CGGGGATGACACCTGAAGAAATCGAAGCGCAGATTACGGTGCCGATTGAAACTGAGCTGTTAGGCATTCCCAATCAAGCG
ATTCTGCGCTCTACCACTAAATATGCCATCAGCGACATCACCTTAGACTTTGTTGAGGGCACCGACATCTATTGGGCTCG
TCAGCAAGTTAGCGAGCGCATTTCTGCTGTGTGGGGGAGTTTTCCTGAAGGGGTTACTGGTGGTGTAGCGCCGATGAGTA
CACCGCTGAGTGAAATTTTTATGTTCACTTTGGAAAACCCTAATCTGTCATTGATGGAAAGGCGACAGTTATTAGAGTGG
GAAATTCGTCCTCTATTACGCACCGTTGTGGGCGTGGCAGATGTCAATATTTTAGGCGGTTATGCCAAAAGCTTTAGCAT
CAATCCAAATCCTGCAGCTATGTCTGCGGCGGGCATTAGTTTTGCGGCTTTGCAACAGGCTATTGTCGAGAATAATCATA
ATGAGGGTGCAGGTAAACTGACCATTGGTACTGACACTATTATCGTCCGCGCCGAAGGCCGTATCGACGACATTGATGAG
TTACGACAGTTAGTGATAAAGGCTGATGATGCCAAGGTTTATCGTTTGAATGATTTGGCTGATATTCAGATTGGTCACTT
AGCCCGTTATGGTGCCGTGACTAAAGATGGTCACGAAACGGCAGAAGGATTAATCATCGCGTTAAAAGATGCCAATACGG
ATCAGGTGGTTAAAAATATTAAACAAAAGATTGAACAAATCAGCCTGACTTTGCCAAAGGGCAGTCAAATCAATACCTTT
TACGATCGGGCGAATTTGATTAATACTGCAATCGGGACCATTTCTAATGCACTATTTGAAGCGGTGGTATTAGTGATCGT
GCTACTGGCATTGTTTTTAGGCAATGTGCGTGCTGCGTTAGTGGTTTCTCTTTCTTTGCCTCTCGCTGCCTTGATGACCT
TTTTAATGATGGATTTTTTCAATTTATCTGCGAACTTGATGAGTTTAGGCGGCTTAGTTATCGCCATCGGTATGTTAGTG
GACTCCTCGGTGGTGGTGGTCGAAAATATGGTTAACCTTATTGCGACCAAACAACGATTGCCACGACTTCATCTCATTTT
TCGAGCCACGAAAGATGTCGCCATTCCCGTGGTATCAGGTACAGCTATTGTGATGATCGTATTTTCGCCATTGCTGACCT
TAACTGGGCTCGAAGGTAAGCTTTTCACTCCCGTGGCGGTCACTATTGTATTTGCGATGCTGTCCGCTCTGGTGTTATCA
CTGACTGTTATTCCTGTAATGGCGTCTTATTTAGTCAATGAAAAGGCGGCCAAAGAACCAAAAGCAATCGAAAAGCTCAA
GCGGGTATACCTTAGCAGCCTTAAAGCAATATTTGTTTATCAAAAACACTTTATTGTTATCGCGTTAAGCTTGTTGATTG
TTAGTTTTGGGCTGTTTAGTTTTGTTGGTAAAACCTTCATGCCGACGTTAGATGAAGGAGACATTATTTTACAGTTAGAG
AAGTCACCGTCGATTTCTCTGAATGCATCGATTGCCATTGATAAGCAAATTGAACAAACTCTGTTGGCACAAGTACCTGA
AATAAAACAAATCGTGGCGCGTACTGGCGCCGATGAAATTGGCTTAGACCCAATGGGGCTAAACGAAACCGATGTTTTTT
TGGAGCTTATCCCTCGTAGCGAGTGGCGTTTTGCCAATAAACAACAACTGATAGAAGCGATTAGAGCCGTACTCGTGGAC
TATCCAGGGGTTAACTTTAACTTTACTCAACCCATTCAAATGAGAGTATCCGAAATGCTGACAGGCAGCATTGGTGATGT
CGCGATAAAAGTCTTTGGTAACGATATTGAGACGTTAGGCAACTTGACCAGTCAAATTCAGCAGCTTGTGAATACCACTC
AAGGGAGTGTCGACGTGAAAATGTCGATGATTGAAGGTAGCTCCTTTATTAACCTCACCCTAGATAATGAAATAGCACGA
GGCTTTGGTATGAGTACCATGGAGTTTGCCCGTTATCTCAAGAGCCAACTCGAAGGCGTGATAGTGACCGAAGTGTTACA
AGGCAAAAAACGTACCCCAGTGCTGATTGCCAGTAACCCAAGCAGCTTAAGCAGTATTAATGAGCTGCAAAACCAATTAT
TAGTGATGCCTGATCATAGCCTTAAACGGGTTACTGATGTGGCCAAGCTAAGTTACAAAAAAGGTCCCATTCTTATTGAG
CGTGAACAAGGCAATCGTTTCTCTGTTATTACGACCAATGTTAATGGCCGTGACATTGTTGGATTTGTTGAAGAACTGAA
TGCAAAAATTACTAATGAGGTTCAATTACCCAGTGGTTATAGCGTCAATTTTGGTGGTGAGTTTGAAAATCAACAACGTG
CTACTAACAATCTGCTGCTGGTTATTCCTATTGCCATAGCGCTCATCACGTTGATTTTATTTACTACGTTTGGCTCACTC
GCCAAAGCTGGGTTGATCCTCGCCAACGTGCCTTTTGCCATGATGGGCGGTATCGTCAGTTTATATCTGTCGGGTGAGTA
TTTATCTGTACCTGCATCAGTAGGTTTCATCGCTCTGCTAGGTGTTGCCGTGCTTAACGGTGTGGTGATGGTGAGCTATT
ACGAGCAAACTAAGCATATGTTCAGTAGCCTTTTGGAAAGAATTGAACAAGGCGCCGTACGTCGTTTACGACCTATTTTA
ATGACGGCCACCACGGCGATGTTTGGCCTTATGCCACTGGTGTTTGCCACAGGCCCTGGCGCTGAAATTCAAAAACCGTT
AGCCATAGTGGTTATCGGTGGTTTACTTACCTCAACGATTACCACGCTTTACTTGCTGCCAATTTTGTATTTCTGGCTGG
AGAAACGTAAATGA

Upstream 100 bases:

>100_bases
TACATTGTTGCCAGTGACCAAGACCTCAGTAAAATTGAGGTGTTAGCGGAATCGGTAGCGGCAGTTAAAGGGATATTACT
TGGCTTAGGAGGCGAATAAT

Downstream 100 bases:

>100_bases
GCACAGAGCAACTCTTAGTGTTGATTGCCCAAAATGATGTTAAGGATGACATCGTTGATACCTTGATTGAACTGGATTTT
TTGTCAGGCTTTAGCCTCGG

Product: heavy metal efflux pump, CzcA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1017_residues
MLTSVIRFSLTQRLFVLIVALFLMLAGVRSWYSIPLDAFPDISPTQVKIILKAPGMTPEEIEAQITVPIETELLGIPNQA
ILRSTTKYAISDITLDFVEGTDIYWARQQVSERISAVWGSFPEGVTGGVAPMSTPLSEIFMFTLENPNLSLMERRQLLEW
EIRPLLRTVVGVADVNILGGYAKSFSINPNPAAMSAAGISFAALQQAIVENNHNEGAGKLTIGTDTIIVRAEGRIDDIDE
LRQLVIKADDAKVYRLNDLADIQIGHLARYGAVTKDGHETAEGLIIALKDANTDQVVKNIKQKIEQISLTLPKGSQINTF
YDRANLINTAIGTISNALFEAVVLVIVLLALFLGNVRAALVVSLSLPLAALMTFLMMDFFNLSANLMSLGGLVIAIGMLV
DSSVVVVENMVNLIATKQRLPRLHLIFRATKDVAIPVVSGTAIVMIVFSPLLTLTGLEGKLFTPVAVTIVFAMLSALVLS
LTVIPVMASYLVNEKAAKEPKAIEKLKRVYLSSLKAIFVYQKHFIVIALSLLIVSFGLFSFVGKTFMPTLDEGDIILQLE
KSPSISLNASIAIDKQIEQTLLAQVPEIKQIVARTGADEIGLDPMGLNETDVFLELIPRSEWRFANKQQLIEAIRAVLVD
YPGVNFNFTQPIQMRVSEMLTGSIGDVAIKVFGNDIETLGNLTSQIQQLVNTTQGSVDVKMSMIEGSSFINLTLDNEIAR
GFGMSTMEFARYLKSQLEGVIVTEVLQGKKRTPVLIASNPSSLSSINELQNQLLVMPDHSLKRVTDVAKLSYKKGPILIE
REQGNRFSVITTNVNGRDIVGFVEELNAKITNEVQLPSGYSVNFGGEFENQQRATNNLLLVIPIAIALITLILFTTFGSL
AKAGLILANVPFAMMGGIVSLYLSGEYLSVPASVGFIALLGVAVLNGVVMVSYYEQTKHMFSSLLERIEQGAVRRLRPIL
MTATTAMFGLMPLVFATGPGAEIQKPLAIVVIGGLLTSTITTLYLLPILYFWLEKRK

Sequences:
NA

Specific function: NA

COG id: COG3696

COG function: function code P; Putative silver efflux pump

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA