Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 114564911

GI number:

Start: 4467142

End: 4468377

Strand: Reverse

Name: Not Available

Synonym: Sfri_3759

Alternate gene names: NA

Gene position: NA

Preceding gene: 114564912

Following gene: 114564910

Centisome position: NA

GC content: NA

Gene sequence:

>1236_bases
ATGAAAAGCTTTAAGGTGCTAGCAGTATTAGCATTATTGGCCGTTGATAGTATTTCAACTGCTATTGCACAAGTCAGTCA
TATCAGTATTGATACTATTCCATTTGAAAGTGGACAATCTCCTCAGTTAACCGTGAACATTATAACCGATCACCATGATT
TATCGCGGCTGACATTTTATTTGCGCCAAATTTATCAAGATAATATTGTGTTAGAAAAGCTTGAAGTTGAACAGCGTGAT
CGTGATGTATTTGTATTAAGTGGTACCGAGAAAATACGCGATCAAGATGCAGCACTCATTGTTTCTGAATACCGTAATGC
TAAATGGCTACAATACTCACCTGTACCTTTATTTTCTCAAGCCATTGTTCAGAGTCAATACCAGCCTGTAGCCATTAAAA
CCATGAAGTCAGCCTCGGCATTATCGACTTCTATGCCAACAACAATAAGTCGCAAGGCCATTGCTATACCTCAGGTAACT
ACAACGCAAAAAAATCTGAATAATTGTCAGATAAATCAGTTACCGAATGATACTTTATGGAAAATAGCGGTGCGCTACCG
TAAACAATGGAATTCAAATATTTATGGTGCAATGCTTGCGCTTTATCAAACGAATCCCTCTGCATTCTATCAAGATAAAA
TTAGTCTACTGCAATTAGGCAGCTCGTTACGTTGTCCATCAATGGCGACTCTTTTGCGCTATCAAAATGTCGCTGTAGAT
AAGATAACATTCGACAATTTAGTCGCCAGTCAACGCGGTAAGTCTCAAGTAGTACCAATGCCTACTCTAACAGTGCCAGC
AACTGTTATCGCCACCCAGCCGGTATTGAGCAATGGTTCGATGAATGATATGGACAGTAAAAAATCTGAAAGTAATGAGT
TATTGGCGGCTATTCATGAAACGAAAATATTGCCTCAGCCATTGCCAATTAAGAACGTAGCCAAGCTATCTCTACCGACT
TATGGCCAAGATAACATCTGCGTAATGGATAAATTCCCTCAAGACACTTTATGGCGAGTTGCTGATCGTTATTATCGACA
ATGGCAAATCAGTGTCTATGGCGCAATACTAGCGATTTATGAGGCAAACCCAGATGCGTTTGCCAATGGTAAAATCTACT
TATTGATGTCTGATAGCCGTTTACAATGCCCATCAGGTGAGATGTTAAAGCAACATCAAAATTCATCTAAGGCACAAATC
ACCTATGAAGCACTAGAGCGCACGCATCGCCAATAA

Upstream 100 bases:

>100_bases
GAGCATTTTATTTGTTGGTGTATAAGTGAATTTAACATCATGGTTTTACGGCGTGTTTTACGCTGTGCTGAAGCGGTTTA
TAATCGAAAGGATTGATTTA

Downstream 100 bases:

>100_bases
TAGTATCGATTAGAAATTCTACTTGTTTGTGTATTAGAGACACTGTATTATCTCGCGCCTAAAACATATTGTTATTAACT
GCATGTGGTGCTCAACTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>411_residues
MKSFKVLAVLALLAVDSISTAIAQVSHISIDTIPFESGQSPQLTVNIITDHHDLSRLTFYLRQIYQDNIVLEKLEVEQRD
RDVFVLSGTEKIRDQDAALIVSEYRNAKWLQYSPVPLFSQAIVQSQYQPVAIKTMKSASALSTSMPTTISRKAIAIPQVT
TTQKNLNNCQINQLPNDTLWKIAVRYRKQWNSNIYGAMLALYQTNPSAFYQDKISLLQLGSSLRCPSMATLLRYQNVAVD
KITFDNLVASQRGKSQVVPMPTLTVPATVIATQPVLSNGSMNDMDSKKSESNELLAAIHETKILPQPLPIKNVAKLSLPT
YGQDNICVMDKFPQDTLWRVADRYYRQWQISVYGAILAIYEANPDAFANGKIYLLMSDSRLQCPSGEMLKQHQNSSKAQI
TYEALERTHRQ

Sequences:
NA

Specific function: NA

COG id: COG3170

COG function: function code NU; Tfp pilus assembly protein FimV

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA