Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114564656

GI number:

Start: 4171139

End: 4173403

Strand: Reverse

Name: Not Available

Synonym: Sfri_3503

Alternate gene names: NA

Gene position: NA

Preceding gene: 114564660

Following gene: 114564655

Centisome position: NA

GC content: NA

Gene sequence:

>2265_bases
ATGATGAAAAATTTCAAGCTATCTTCATTAACTGTAGCAATAGCTTTAATTTGCCAAGCTAATAGCAGTTTTGCCGCAGA
TAAAATACAACAAGAAGTCAGCAAAGATAGAGTCGAAAAAATTGTAGTAACCGGCACATTTAGTGGGAAAAGTGTTGCCA
AAGAAGATGCTAGTTATGCCATTAGCTCGTTTTCTGAAGACGATATTAAAAAATTGGCTCCAAAAAGCACTGCAGAACTT
TTTCAGGCTGTACCGGGGATTTGGGCTGAAAGTTCAGGTGGTGTATCAGGTGCTAACGTGTTTGTTCGTGGTTTTCCTGG
GGGCGGAGATGCTCCTTTCTTAACTGTTCAACTGCAAGGCGCGCCTATTTTTCCACCGCCAACGCTGTCATTTTTAGAAA
ACTCAACCTTATTTAGACTAGACGAAACAGTGTCATTCATGGAAGCACTTCGTGGTGGTCCTAATCCTGTGGTATCAAAT
GGCCAACCAGGTTTAACCACAAACTTTTTATTAAAAGAAGGCTCCGAAGAAACTGAAGGTTTAGTGAAATATTCAACTTC
AGATTACAACTTACAACGTGTTGACGGCGTTGTTAGTGGCCAATTAGCAGAAGATTTATATTTTATGGCTGGTGGCTATA
TTAAGAGCTCACCAGGCGTTCGTGATGCCGGATTCAATGCAGAAGAAGGCAAACAGTTTACGGTTAATATCACCAAAAAA
TTTGATAACGGTAAGTTCAATGTTTTTACTCGTCAAACTGATGACCATGGCGTGTGGTATTTGCCTGCACCGATAAATGT
TTCTACTGTCGATAATCAATATAACCAAATTGGAACCAATAACCGTCAAGCAACAGTTAAATTTGGACCCAATGGTGAAG
CTATCAACGTTGATTTTGGCCAAGGTCGAGGCTGGAATGGTTCTGTATCAGGCGGCAGTTTAGATTTAACCTTAGACAAT
GGTTGGGGCATTGTTGACCGTTTTATTTATACCAAAGGCGATGCTGATACATATGGATTAGTCCCTGATGGTGATCCAGT
CATGTTATCGACGATTGCAGACAGTGGAAGCACTGCTTCTGGCGCGGTAACAGGAACAGAATACGCGGGCTCAACTGTGG
TACAGCAAATTGGTCGTTGGGTTGTTAAGAAACAAATTGAAGCCTTTACCAATGATCTCGCTATTACTAAAACATTTGAT
AACAGTACAATTACTGCGGGTTATTACCACTCTACCTTTAGCGCGAATGACTGGTGGTCAATAGGTAACCAAGCTTATCA
TGTGGTTGAGTCTGGTGGCGAAATGCTAACGGGAATCGATTGTAACGATAACCAAGATAGCTGTGGTTGGAATTACGATA
TAAACAGTGTTGGCGATGGGTCTACTCAAGCTTTTTATGTTGCAGCATCCCATGAAATAACCGATTCACTCTCGATGGAT
GCTGGTATTCGCAACGAAAATCATCAAATTGAGTATACGGTTGATGAAGGGTTAGACGGTGTGATCAGCAAAGCGGTTTC
CTATGATGAGTCTGCCATAGCATGGACTTTAGGAGCAAATTGGATGTTTGCTGATTCCCAAGGCATATTTGCACGGATAA
GTGATGGTTCTAAAATGCCATTCTTTGATGATTTTCGCGATAACTTTGACGCATATCAGTCGGGTGAAGATTTGATTAAA
GATGTTACTCAATATGAATTGGGTTACAAGTTAGTTGCTGATGATTACGAACTTTATGCCACAACATTTTTCAATGAAGT
AAAAGGCGATACTTTTGTTGCAGTTCCAGGTGCCCCAGCTGAGGTATTAACAAACCAAGCGTATGGTCTTGAAGTTGATT
TTAATTACTTCACGGATAGTGGCTTTACGTTAAATCTTAATTCAACCATACAACAAACTGAAATTACCGAAAGCCCTACC
AATAAAGGTAATGAAGCGCAAAGGCAGCCTGGCTGGCAAGTGCGTATGACACCTAGTTACGATATTGATTTTTCAAATGG
GATGTACGCGACGCTTTACGGAACGGTATCGGCAGTTGGCGACCGTTTTGCTAATAATGAAAACACGGTAACGTTAGCTG
GATACACCAAAGTCGATTTAGGCGTTATTGTTAACTTAACCGAAGAAGTTCAAATGCAGCTTGCTGTGAGTAATTTAACA
GATGAGAATGCACTAACAGAAGGTGACCCTCGAGATTCACTTTCTTCAAATGGACGCTATATCCTTCCAAGAACCATTGA
TTTTAATGTAAGTTACCAGTTTTAA

Upstream 100 bases:

>100_bases
GTTTGCATTGGAACCTATATTGGGTGTGGGGAAGAAAAAGTAATCAATATAATAAATCGTTGATCATCGCTAAATGCGCT
TGTCAACCAAAGGGAAAAAC

Downstream 100 bases:

>100_bases
TCCCCTAAAACTCTCTTAATATATTAACAGCCAGTAGTGCAAACTACTGGTTTTTTTGTCTTTTTTTTATCACGTTTTCG
ATGCTATTTTGCTGGTATGC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>754_residues
MMKNFKLSSLTVAIALICQANSSFAADKIQQEVSKDRVEKIVVTGTFSGKSVAKEDASYAISSFSEDDIKKLAPKSTAEL
FQAVPGIWAESSGGVSGANVFVRGFPGGGDAPFLTVQLQGAPIFPPPTLSFLENSTLFRLDETVSFMEALRGGPNPVVSN
GQPGLTTNFLLKEGSEETEGLVKYSTSDYNLQRVDGVVSGQLAEDLYFMAGGYIKSSPGVRDAGFNAEEGKQFTVNITKK
FDNGKFNVFTRQTDDHGVWYLPAPINVSTVDNQYNQIGTNNRQATVKFGPNGEAINVDFGQGRGWNGSVSGGSLDLTLDN
GWGIVDRFIYTKGDADTYGLVPDGDPVMLSTIADSGSTASGAVTGTEYAGSTVVQQIGRWVVKKQIEAFTNDLAITKTFD
NSTITAGYYHSTFSANDWWSIGNQAYHVVESGGEMLTGIDCNDNQDSCGWNYDINSVGDGSTQAFYVAASHEITDSLSMD
AGIRNENHQIEYTVDEGLDGVISKAVSYDESAIAWTLGANWMFADSQGIFARISDGSKMPFFDDFRDNFDAYQSGEDLIK
DVTQYELGYKLVADDYELYATTFFNEVKGDTFVAVPGAPAEVLTNQAYGLEVDFNYFTDSGFTLNLNSTIQQTEITESPT
NKGNEAQRQPGWQVRMTPSYDIDFSNGMYATLYGTVSAVGDRFANNENTVTLAGYTKVDLGVIVNLTEEVQMQLAVSNLT
DENALTEGDPRDSLSSNGRYILPRTIDFNVSYQF

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA