| Definition | Shewanella frigidimarina NCIMB 400, complete genome. |
|---|---|
| Accession | NC_008345 |
| Length | 4,845,257 |
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Identifier: 114564488
GI number:
Start: 3976379
End: 3978265
Strand: Reverse
Name: Not Available
Synonym: Sfri_3327
Alternate gene names: NA
Gene position: NA
Preceding gene: 114564489
Following gene: 114564487
Centisome position: NA
GC content: NA
Gene sequence:
>1887_bases ATGAGCAACCAATATACTTCTGACGCTATTGAGGTCCTTAATGGACTTGACCCGGTAAAACGCCGTCCAGGTATGTATAC CGACACCTCTAGACCTAATCACCTTGGGCAAGAAGTCATTGATAACAGTGTTGATGAAGCTCTGGCGGGACATGCGACTA AAATTGAAGTTGTACTCCATACCGATAACTCCCTTGAAGTGACCGATGATGGCCGTGGTATGCCGGTGGATATTCACGCT GAAGAAGGCATTCCTGGGGTTGAACTTATTCTGACTAAATTGCACGCTGGTGGTAAGTTTTCTAATAAAAACTACCAGTT CTCGGGCGGTTTACACGGGGTTGGTATTTCTGTTGTTAACGCCTTATCCACCCGAGTTGAAATCAGTGTTCGTCGTGATG CGCAAATATACCAAATGGCCTTTGAGAATGGTTTCAAGGTTGAAGAGTTGGTGGTAACCGGTACTTGTGGACGACGTAAT ACCGGTACTAGAGTGCATTTCTGGCCCGATGTAAGTTATTTTGATTCACCTAATTTCTCGGTCAGTAAGTTAATTTACAT CTTGCGAGCTAAAGCGGTATTGTGCCCTGGCTTACGGATTAAATTCACCAATAAACAAAATGGTGATGTGCATGAATGGT TTTATGAAAGTGGCTTAACCGATTACCTCAAAGAAGCGATAAAAGACTCGGTTTTATTGCCAGAAGAACCCTTTGTCGGC AGCTTTAAAGGCAAATTAGAAGCTGCTGAGTGGGCTATTACATGGTTGCCTGAAGGTGGCGAGAGTTTAAGTGAAAGCTA TGTGAACTTAATTCCGACACCATTAGGTGGTACTCATGTGAATGGGTTTAGACAAGGTTTGCTTGAGTCTATGCGTGAGT TTTGTGAATTTCGTAATCTTGTTCCTCGGGGGATTAAATTATCGCCCGAAGATATTTGGGACCGTGCGGCGTTTATTTTA TCGATAAAAATGCAAGACCCTCAATTTGCTGGGCAAACCAAAGAGAAATTATCGAGCCGTCAAAGCTCGGCATTTGTTTC TGGTATTGCTCGCGATGCCTTTTCGCTGTGGTTAAACTCCAATACTGAGCTAGCAGAGCAGTTAGCAGAACTGTGTATTG GTAATGCATTGCGCCGCTTAAAGGCCGCTAAAAAAGTCGCACGTAAAAAAGTCACCTCCGGACCGGCATTACCAGGCAAG CTAACCGATTGTAGCGGCCAAGATCCAATGCGAGGAGAGCTGTTTTTAGTAGAAGGTGATTCAGCTGGTGGTAGTGCCAA ACAAGCACGAGACCGCGAGTTTCAAGCAATTATGCCGCTAAGAGGTAAGATTTTAAATACTTGGGAAGTCGATTCCGGAC AAGTGTTAGCGTCGCAAGAGGTACATAATATTTCGATTGCGATTGGTTGCGATCCTGACAGTGATGATATTTCAGAATTA CGTTATGGTAAAATTTGTATCTTAGCCGATGCGGATTCTGATGGATTGCATATTGCCACACTATTATGTGCGTTGTTTTT AAAGCATTATCGTGTATTAGTTAACAATGGTCATGTGTATATTGCTATGCCACCGTTATTTCGTATTGATATTGGTAAAG AGGTTTTTTACGCCCTGGATGAGGCTGAAAAAGTCGGCATTTTAGATCGTATTACGGCAGAAAATAAAAAAGGTAAAGTG CAAGTGACTCGCTTTAAAGGTCTGGGTGAAATGAACCCGTTGCAACTACGTGAAACCACTATGGATCCCAATACTAGACG CTTAGTGCAATTAACTATTGATGATGCCGATGAGACAGTGGCATTAATGGATATGTTACTTGCCAAAAAGCGTGCTCCTG ATCGTAAAAGTTGGTTAGAAACCAAAGGTGACCTAGCGTTGCTTTAG
Upstream 100 bases:
>100_bases GACAAAATATGTAAATTTATTCAGTTGTAACCTTCTACCGTTACAAACAACGATCAATTTGAGCTAACTTTGGCTCTATT TAACTCCAAATGTGTGGATT
Downstream 100 bases:
>100_bases TCGTGTTTCTTAGTGCCAATAATAATGTATAACATAAGGCAAAAGATAATTAGCATGCAATATATTAGATTACGATCTTA CGTAAATTTGGGCGGTAAAT
Product: DNA topoisomerase IV subunit B
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>628_residues MSNQYTSDAIEVLNGLDPVKRRPGMYTDTSRPNHLGQEVIDNSVDEALAGHATKIEVVLHTDNSLEVTDDGRGMPVDIHA EEGIPGVELILTKLHAGGKFSNKNYQFSGGLHGVGISVVNALSTRVEISVRRDAQIYQMAFENGFKVEELVVTGTCGRRN TGTRVHFWPDVSYFDSPNFSVSKLIYILRAKAVLCPGLRIKFTNKQNGDVHEWFYESGLTDYLKEAIKDSVLLPEEPFVG SFKGKLEAAEWAITWLPEGGESLSESYVNLIPTPLGGTHVNGFRQGLLESMREFCEFRNLVPRGIKLSPEDIWDRAAFIL SIKMQDPQFAGQTKEKLSSRQSSAFVSGIARDAFSLWLNSNTELAEQLAELCIGNALRRLKAAKKVARKKVTSGPALPGK LTDCSGQDPMRGELFLVEGDSAGGSAKQARDREFQAIMPLRGKILNTWEVDSGQVLASQEVHNISIAIGCDPDSDDISEL RYGKICILADADSDGLHIATLLCALFLKHYRVLVNNGHVYIAMPPLFRIDIGKEVFYALDEAEKVGILDRITAENKKGKV QVTRFKGLGEMNPLQLRETTMDPNTRRLVQLTIDDADETVALMDMLLAKKRAPDRKSWLETKGDLALL
Sequences:
NA
Specific function: NA
COG id: COG0187
COG function: function code L; Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA