Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114564486

GI number:

Start: 3972874

End: 3975177

Strand: Reverse

Name: Not Available

Synonym: Sfri_3325

Alternate gene names: NA

Gene position: NA

Preceding gene: 114564487

Following gene: 114564478

Centisome position: NA

GC content: NA

Gene sequence:

>2304_bases
ATGAGTGATGCGATTGAATTAAGCCTTGATGGTGTAGAGCAAATGCCGCTGAGGCGCTTTACCGAAGGGGCTTATTTAAA
TTATTCCATGTACGTGATTATGGATCGCGCCCTACCGCACATTGGTGATGGTCTAAAACCCGTCCAACGACGCATTATCT
ATGCAATGAGCGAGTTAGGTTTATCTGCGCAATCTAAGCACAAAAAATCAGCCCGTACTGTCGGTGACGTGTTAGGTAAA
TATCACCCGCATGGTGATAGTGCGTGTTACGAAGCGATGGTGTTAATGGCGCAGCCATTTTCCTATCGATATCCGCTGGT
TGACGGCCAAGGTAACTGGGGCGCGCCAGATGATCCTAAGTCATTTGCTGCAATGCGTTATACCGAAGCTAGATTATCAA
AGTTTTCTGAAGTGTTACTGTCGGAATTAGGACAGGGTACCGTAGATTGGAGCCCTAACTTTGATGGCACCATGAAAGAG
CCTGTAACCTTACCAGCACGATTACCGCATATATTATTGAATGGTATTACCGGTATCGCGGTTGGCATGGCAACGGATAT
TCCGCCGCATAATGTGCATGAATTAGTGGGCGCCTGTATAGAGCTAATCGATAATCCTAAAGCGGATTTAGCACGCCTAA
TGGAGTTTGTTCCAGGCCCTGATTACCCAACAGAAGCCGAAATAATTACCCCTAGAGCTGATATTGAGCGGATTTATGAT
ACGGGTAAAGGCTCAATCAGGGCGCGTGCAGTTTACAGTGAAGAGCAGGGCGAGATTGTTATTACTTCATTACCGCATCA
AGCCAGTAGCGGTAAGATTTTAGAACAAATTGCCAATCAAATGCAGGCAAAAAAGTTGCCGATGGTGTCTGATTTACGTG
ATGAATCTGATCATGAAAACCCAGTGCGATTAGTGATTGTACCTCGTTCAAATCGCATTGATTGTGATCAGCTAATGACC
CATTTATTTGCGACGACAGATCTTGAAAAAAGCTTCCGAGTTAACCTCAATGTGTTGGGGCTCGACGGCCGTCCGAAAGT
AAAAGGGCTAAAACAACTGTTAACTGAGTGGTTAGAATTTCGCCTTACAACAGTCACTCGCCGCTTGCAATATCGACTTG
ATAAAGTATTAGCACGGTTACATATTTTAGAAGCATTAATGGTTGCGTTTTTAAACATTGATGAAGTGATCGAAATTATT
CGTTATAACGACGAACCTAAAGCTGAGTTGATGGCTCGCTTTAACTTGTCGGATAAACAAGCTGAATCAATTTTAGAGTT
AAAATTACGTCATTTAGCCAAGCTTGAAGAATTTAAAATTAAAGGTGAGCAAGATGAGCTTGCGGCAGAACGTGACAAAT
TAGAGTTATTGTTAAGCTCTGAACGTCGCTTGAAAACCTTAGTGAAAAAAGAATTGATCCAAGATGGTGAGACTTATGGT
GATAATCGTCGTTCGCCTATTATTGAACGTGTAGATGCCAAAGCGCTGACTGAGCAAGAGTTAACGCCAACAGAGTCTGT
CACTGTTGTATTGTCTGATAAAGGCTGGGTACGTTGCGCTAAAGGCCATGATGTCGATGTAGAAGGGTTATCGTATAAGT
CTGGTGACAGTTATCTTTGTAGCGTGATGGGCAAGAGTAACCAAGCCGCGGTGTTTATTGATTCGACTGGACGTGCATTT
GCCACCGACAGCCATACGTTGCCTTCAGCGCGAAGCCAAGGCGAGCCTATCACCACACGCTTTAATATGGCACCTGGCGC
GACGATGCAACATGTGCTCATGGGCGAAGATGAACAGTTCTTCTTGTTGGCTACCGATGCTGGTTATGGCTTTATTTGTG
CTTATCCAGATTTGGTTAGCCGTAATAAAGCCGGTAAGGCACTACTCAGTCTGCCAACCAATGCGCTTGCTATGCAGCCA
AAGTTAATCAATAAAACGGCAGATCAGTCGTTGTTAGCGATTACCTCTGAAGGCCGAATGTTGATGTTTAGTTTAGATGC
CTTGCCACAGTTATCAAAAGGTAAAGGCAACAAGATTATCGGTATTCCAACCGATCGCGCTAAGAATCGTGAAGAGTTAC
TTTTGCACTTAAATGTTGTGCCGCATAATACCGCAGTAACTTTGTGGGCTGGTAAGCGCAAGCTAACCTTGAAACCAAGC
GATTTAGAGCACTATCGTGGTGAGCGTGGTCGTCGTGGTGCTAAGTTACCAAGAGGATTACAACGCGTAGACAGTGTTGA
TGTCGAAATGGGACCATTGGCAGAAGACGGCTTGCAAGACGATAATCTGGATATACACGAGTAA

Upstream 100 bases:

>100_bases
ATTAATGCGCCTGATGGTGCAATGTACATTTCAGATGATCTAAAAGGTAATATTTACCGCTTGTTTTATAATGCACCCGA
ACAATCACAGGAAACGAATA

Downstream 100 bases:

>100_bases
GATTGTTGGATTGTAGAATAAAAAAATGCTGCTCATATGTCATATGAGCAGCATTTTTTTATGGAAGCAGAGTCGACTTA
TATATTAATGCGACTAGGCA

Product: DNA topoisomerase IV subunit A

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>767_residues
MSDAIELSLDGVEQMPLRRFTEGAYLNYSMYVIMDRALPHIGDGLKPVQRRIIYAMSELGLSAQSKHKKSARTVGDVLGK
YHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTEARLSKFSEVLLSELGQGTVDWSPNFDGTMKE
PVTLPARLPHILLNGITGIAVGMATDIPPHNVHELVGACIELIDNPKADLARLMEFVPGPDYPTEAEIITPRADIERIYD
TGKGSIRARAVYSEEQGEIVITSLPHQASSGKILEQIANQMQAKKLPMVSDLRDESDHENPVRLVIVPRSNRIDCDQLMT
HLFATTDLEKSFRVNLNVLGLDGRPKVKGLKQLLTEWLEFRLTTVTRRLQYRLDKVLARLHILEALMVAFLNIDEVIEII
RYNDEPKAELMARFNLSDKQAESILELKLRHLAKLEEFKIKGEQDELAAERDKLELLLSSERRLKTLVKKELIQDGETYG
DNRRSPIIERVDAKALTEQELTPTESVTVVLSDKGWVRCAKGHDVDVEGLSYKSGDSYLCSVMGKSNQAAVFIDSTGRAF
ATDSHTLPSARSQGEPITTRFNMAPGATMQHVLMGEDEQFFLLATDAGYGFICAYPDLVSRNKAGKALLSLPTNALAMQP
KLINKTADQSLLAITSEGRMLMFSLDALPQLSKGKGNKIIGIPTDRAKNREELLLHLNVVPHNTAVTLWAGKRKLTLKPS
DLEHYRGERGRRGAKLPRGLQRVDSVDVEMGPLAEDGLQDDNLDIHE

Sequences:
NA

Specific function: NA

COG id: COG0188

COG function: function code L; Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA