Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114564445

GI number:

Start: 3928215

End: 3930125

Strand: Direct

Name: Not Available

Synonym: Sfri_3284

Alternate gene names: NA

Gene position: NA

Preceding gene: 114564443

Following gene: 114564446

Centisome position: NA

GC content: NA

Gene sequence:

>1911_bases
ATGATCAACATAAGCCAAGCTCAGTTAATTCGCGGCAGTAAAACCTTACTCGATGAAACCTCACTGACGATTTATCCCGG
ACACAAGGTTGGCCTTGTCGGCGCCAACGGTACAGGTAAATCATCATTGCTTGCCTTGATTTTAGGTCATTTACATCTAG
ATAAAGGTGAGTTTAGTTTCCCCTCAGGTTGGCAAGTTGCCTCTGTTGCGCAGGAAACTCCGGCATTAGATGTGTCGGCA
CTTGAGTATGTCCTCGACGGTGACACCGAATACCGAGATTTAGAAGCCCAACTAGAGAAAGCTCAAACCGACAATAATGG
TAATGCCATTGCGCTTATTCATGGCAAAATTGATGCAATTGGCGGCTATGCCATTAAAGCGCGAGCAGGCGCGCTATTAG
CAGGCTTAGGATTTAAGGATGCAGACCAAAGTAACCCGGTAAAAAGCTTCTCTGGTGGTTGGCGTATGCGTCTCAACTTA
GCCCAAGCACTCTTATGTCGTTCAGACTTATTGTTACTCGATGAGCCAACCAACCACTTAGACCTAGACACCATGTATTG
GTTAGAAGGTTGGATAAAATCTTATCAAGGGACACTCATTTTGATCAGCCACGATCGTGACTTTATCGATGGCATTGTTG
GTGAAATTGTTCATGTTGAAAATCACAAATTAAATTACTACAAAGGTAATTACTCTTCTTTTGAACGAGTGCGCGCTGAA
CGCATGGCCCAGCAGCAAGTAGCCTTTGAGCGTCAGCAAAAAGAGCGCTCGCATATGCAGTCATTTGTTGATCGGTTTCG
CTATAAAGCCAGTAAAGCTAAACAAGCACAAAGCCGCTTGAAAGCACTCGAGCGCATGGCCGAGTTGCTGCCATCGCAAG
TAGACAATCCATTTCAAATGGCCTTTAGAGAACCAGAAGCGCTACCGAACCCATTAGTGGTAATGGAAAATGTCTCTATT
GGTTATGAAGATAATACCATCCTGAAACAGGTTGAGTTAAATCTCGTTCCTGGTGCGCGTATTGGTTTGTTGGGTAGAAA
TGGTGCCGGTAAATCAACGCTGATCAAACTGTTATCAGGCCAACTACAAGCCAAAACGGGTAAGTATCAACCTAACCCAG
GATTAAATATTGGTTATTTTGCTCAGCATCAAGTTGAATTTTTAACGCTTGATGATTCTCCAATGCAACACTTGGCTAGA
CTCGCGCCAGCAAGTGTTCGCGAACAAGAATTACGTAACTTTTTAGGTGGGTTTGGCTTTAATGGTGATATGGCCTTATC
GCCAGTACGGCCGTTTTCTGGCGGCGAAAAAGCCCGCCTAGTATTAGCATTAGTGGTTTGGCAGCGTCCAAATTTACTAT
TACTCGATGAACCGACCAACCATTTAGATTTAGAGATGCGTCACGCACTCACCATGGCATTGCAAACCTTTGAGGGCGCA
ATGGTTATCGTGTCACACGATCGTCACCTATTACGATTAAGTTGTAGTGATTATTACTTAGTTGACCAAGGTGTTGTAAC
ACCTTTTGATGGCGACTTAGATGACTACCATCAATGGTTGCTAGATGCCGCTAAACTAGCACAAGCCAACAACAAAACAG
ATGTAGGCGCTAGCAGCGATGCTGTTGATAAAAAACAGCAAAAAAGAATGGAAGCTGAATTACGTCAGAAAGTATCGCCG
CTGAAAAAACAACAAGTAAAGTTAGAAACTCAACAGCAAAAAATTAATGCCCGATTAGCCGAATTAGAAATTGAGTTAGC
CGATGGCAGCTTATACGAAACAGAGAACAAAGCTAAAATGACCAATGTTCTCAACGAACGGACTACGCTGACTCAAGCTA
TGGATGAAAGTGAAATGCATTGGTTAGAGATTCAAGAGCAGATCGATATTTTTGAGCAAGATTGCCTATAA

Upstream 100 bases:

>100_bases
CCATGATTAGCCCACATGAGTCCCGTGATTGTGGGAAATAAATCGTAGATGCGATATTATCTGCACCATTATTCTATTCT
TAAGTATCAAGTTGTAATTA

Downstream 100 bases:

>100_bases
GCAATTGCTCTTCATTATTTTATTGTCATTTGTGGTGTAAAATAGCATCACAAAGGCAACAAGGAATACGGTATGTCGCG
GCCTTCTCACCACCAAACAT

Product: ABC transporter related

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>636_residues
MINISQAQLIRGSKTLLDETSLTIYPGHKVGLVGANGTGKSSLLALILGHLHLDKGEFSFPSGWQVASVAQETPALDVSA
LEYVLDGDTEYRDLEAQLEKAQTDNNGNAIALIHGKIDAIGGYAIKARAGALLAGLGFKDADQSNPVKSFSGGWRMRLNL
AQALLCRSDLLLLDEPTNHLDLDTMYWLEGWIKSYQGTLILISHDRDFIDGIVGEIVHVENHKLNYYKGNYSSFERVRAE
RMAQQQVAFERQQKERSHMQSFVDRFRYKASKAKQAQSRLKALERMAELLPSQVDNPFQMAFREPEALPNPLVVMENVSI
GYEDNTILKQVELNLVPGARIGLLGRNGAGKSTLIKLLSGQLQAKTGKYQPNPGLNIGYFAQHQVEFLTLDDSPMQHLAR
LAPASVREQELRNFLGGFGFNGDMALSPVRPFSGGEKARLVLALVVWQRPNLLLLDEPTNHLDLEMRHALTMALQTFEGA
MVIVSHDRHLLRLSCSDYYLVDQGVVTPFDGDLDDYHQWLLDAAKLAQANNKTDVGASSDAVDKKQQKRMEAELRQKVSP
LKKQQVKLETQQQKINARLAELEIELADGSLYETENKAKMTNVLNERTTLTQAMDESEMHWLEIQEQIDIFEQDCL

Sequences:
NA

Specific function: NA

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA