Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114564386

GI number:

Start: 3861727

End: 3863874

Strand: Reverse

Name: Not Available

Synonym: Sfri_3225

Alternate gene names: NA

Gene position: NA

Preceding gene: 114564388

Following gene: 114564385

Centisome position: NA

GC content: NA

Gene sequence:

>2148_bases
ATGGAACATGTAATGAAAATCAATACTTTACAGTTTAATAAATGTAAATTGGCTGTTGTATGTGCTTCTGCACTCTCTTT
GAATAGTTACTCTGCTATAGGGGAGGAAAACGTAGAAGAGACTAAAGGCAGTATTGAAACCATTAGTGTGGTGGGCCATA
AACTGACCGAGCTGAGTTCTAATAATAATGGTGGAGCCTTGGGTAATAAAACTTTATTAGAAACCCCCTTTTCAGTAGAT
GTTATTTCGCTTGAAGATATAGAAATTCGTCAGGTTAATACTCTGGATAGTCTTTTTAGTAGAGAAGCATCTGTATCGGT
TGATGGTAGTGCTTACAGTACCTTTGGCTCAACTATTCGTGTTCGTGGCTTACCTTTAGACTATACCAATAGTTTTAAAA
TTAATGGTATGTCTATCAATAATTTTAGTGGTGAACTCCCTTATGAAGCCTTCGAGCAAGTTACCTTACTAAAAGGAGCC
TCTGGCTTCATGTATGGGATGGCTGCACCTGGTGGCGTCGTTAACTATGTGACTAAAAAAGCAACAGGCGATAAATTTAT
TGTTGATGTTGGCATGCGCAGTGACAGTGTATTTAGTGGTCATATTGATGCCAGTAAGCGTTTAGGTGATAACGATGAGT
ATGGTGTTAGGGTTAACCTTGTTAAAGAGTCGGGGGACACGTATTTAGAAGATGGCACAATTGATCGTAATACTGCAGCT
TTAGCATTTGACGCACAATTAACCGATTCACTTTATTGGACTGTTGATGTTATTTATAACGATCGCTTAACTGAAAATTC
ATGGACTACAATGAATAATTCGTTAGGCAGTACTGATTTGCTTCCTGATACTGTTAGCGGTACTCGCAGTATTGGAGCTG
ACGGTACCTTCGATGATTACAAAAATATCGTAGCGTTAACCAGCCTAAATTGGGACATTAATGATAACTGGAGTGCTCGT
CTTGAGTATGATTATTCTAAGAATGAGACTCGTTGGGTAAAAAGCTTAGCCTACTTACTCAATAGTGATGGTGATGTTAA
TATTTCCTTATATGACCAGTATTTTGATGTTAATTATGATCAAATTCAGGCTGTGATTAACGGTGAGTTTGAAACCGGTA
GCATTCGACACAACCTGTTGTTAGGTGCGTCATATCAGAAGTCTACAACGTATCGGAATGATCCGCATCGCGTAGTAATG
TGGGGTTATGGAACCGATAATCTGTTTAATCCTGTTGAGATTCCAACCTATAATTCAACCTTAGAAGATAATCTATCTAT
GGCTTGGATTGATAAACAACAATCGGTTTATCTCAGTGACTTTATTTCGCTAACCGATCAATGGGAAGTCTTACTCGGTA
TTCGATCTAATCAAATTGAACATACGCCAAGCGAATATTTCTCTTCATACCAAGCTTACAATGAAGACCGCGCCCTAAGT
CCTACTGCTGCATTGATGTTTAAACCTGATGATAAAACAACATATTATGTCAGCTATGTTGAATCGTTTGAGGGGACAAC
GTCGTATGTTGGCGAGACTTACGCAAACGCTGATGAGCTACTAGAACCATTAGAAAGTAAGCAATATGAATTGGGTGTTA
AAACAGCTGGTGACGGTTGGTCTTTAACGTCGGCACTATTTCGCATCGAACGAGGCGCCACACTGGTTACTGGTGATAAT
TATTTAGTACAGGATGGACTTAGCATTTATCAAGGTTTGGAATTTAGTGGAGCATGGGAAGTCACTGATAATTTATCTCT
ATACGGTGACTTGATGTTATTGGATGCCACTTATGACAAGACAAATTCAGCGGTGGAAGGTAATGACGTTGCTGGTACAC
CAAATCAACAGTTTAGCTTGCAGACTAACTATGAGGTCGATGCAGTGCCTGGTTTAGCTGTTAATTTAGGCGCCAAATAC
TTTGGTGAAACAACATTAGATTCTAATAATACCTGGGAATTACCTGCTTATACTTTGTTTTACACCGGTGTTAGCTATAG
CACGATGATTGACTACAAAACGCTAACCGTTATTGGTACCGTTGATAATTTATTCGACGAAGAGTTTTGGGCAGCTGGTG
ATGCTTATGGTGCATTGCGTATCGGTGAACCTCGTAGTTTTGCTGTTAAAGTAAAGATGAGTTTTTAA

Upstream 100 bases:

>100_bases
TTGATAATCGTTGTTATTAGTATTAGCTTGTTTGTCGCTAAATGTTGATAAGTTAAAAGACGCTTATTGTAGAAGCGTGA
ATATCTTTTATAAATACTAA

Downstream 100 bases:

>100_bases
GCATTACACAAAATGTTAATCACTTCATTATTAACATATCAATGGCCGTTAATTGACTACTTTTATCGGCCTAAAATAAC
GCTATGTAAACTAATATTGA

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>715_residues
MEHVMKINTLQFNKCKLAVVCASALSLNSYSAIGEENVEETKGSIETISVVGHKLTELSSNNNGGALGNKTLLETPFSVD
VISLEDIEIRQVNTLDSLFSREASVSVDGSAYSTFGSTIRVRGLPLDYTNSFKINGMSINNFSGELPYEAFEQVTLLKGA
SGFMYGMAAPGGVVNYVTKKATGDKFIVDVGMRSDSVFSGHIDASKRLGDNDEYGVRVNLVKESGDTYLEDGTIDRNTAA
LAFDAQLTDSLYWTVDVIYNDRLTENSWTTMNNSLGSTDLLPDTVSGTRSIGADGTFDDYKNIVALTSLNWDINDNWSAR
LEYDYSKNETRWVKSLAYLLNSDGDVNISLYDQYFDVNYDQIQAVINGEFETGSIRHNLLLGASYQKSTTYRNDPHRVVM
WGYGTDNLFNPVEIPTYNSTLEDNLSMAWIDKQQSVYLSDFISLTDQWEVLLGIRSNQIEHTPSEYFSSYQAYNEDRALS
PTAALMFKPDDKTTYYVSYVESFEGTTSYVGETYANADELLEPLESKQYELGVKTAGDGWSLTSALFRIERGATLVTGDN
YLVQDGLSIYQGLEFSGAWEVTDNLSLYGDLMLLDATYDKTNSAVEGNDVAGTPNQQFSLQTNYEVDAVPGLAVNLGAKY
FGETTLDSNNTWELPAYTLFYTGVSYSTMIDYKTLTVIGTVDNLFDEEFWAAGDAYGALRIGEPRSFAVKVKMSF

Sequences:
NA

Specific function: NA

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA