Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114564383

GI number:

Start: 3859382

End: 3860971

Strand: Reverse

Name: Not Available

Synonym: Sfri_3222

Alternate gene names: NA

Gene position: NA

Preceding gene: 114564384

Following gene: 114564382

Centisome position: NA

GC content: NA

Gene sequence:

>1590_bases
ATGAGAGTTCGCGGAGATATTCTACGTACATATCAATCCATCCATACATGGACAGGTATTATTGCCGGTTTAGTACTCTT
TATTGGTTTTTATGCTGGTTCATTGACGATGTTTAAGGAAGAAATTACTCAATGGGCGACACCGCCAAGCCATCAATTAC
CACAAGTACCAAAAGATCAGTTTGATCAATTAATCTTACAAGCATCAACAAATTTTGATAAAGCCCAGCAAAGTTTTACG
GTTAACTTTAATCAACAATTATCGCCGCTTACATGGTTTGAACAGGGCGGTGGCCGTGGTTTACATTTAAATAATGTCAT
GAGACACGCGACCTTGTCAGATGAAGGGGCGTTAGTTACCCAAGTTAACCCCACGAATGAACTCGGAGAGTTGATTGATA
TGCTTCATCGCACGGCTGGCATAGCAGGAAAAGCCGGGCATGAAGATATTGGTGTTCTCGTTTTAGGGGGGGCATCAGTG
CTATATTTTTTAGCATTAGTGTCTGGTGTTATTTTTTTATTACCGACGTTAGTTAATAGCTTTTTAGCGATAAGAAAGAA
CAAAGGCGTAAATCGTTTTTGGCTCGATAGCCATAATTTAGTCGGTATTATTAGCTTACCGTTCCATTTGATTATTGCTT
GGACTGTGATTGTGTTTGCTTTTCATGATGTTCTTTATGGTGGTTTAAGCCTAGTATATGGCGATGAACCCATGTTCGAT
CGTGGTGAGAGATCAACAATAGAGTACTCAATTGAACAGCTTCCGCCTATTTCAAGCTATCTTCAGAAAGTTAATGAAAT
GACCGACGGTTACCATGTGGAATCAATGGCTTTCTCTGATTTATCAACAACAAATCCAATGGTTGGCATTACCATTATTA
ACGAACGTGAAATGATGCGTGTCAATTCTGGCGATTTTATTTACATGAACCCTTATACCTTTGATGTTGGCTACAGTAGT
ATTCCGTTGAAAGATAATGATATTTATACTCCACTGGTTGCTAGCTTTTTTTCGCTACATTTTGGCGGCTATGCTGGAGA
TTTAGGTCGGTGGGTTTATTTTTCTTTGGGCTTACTTGGGGCATTTTTATTCTATAGTGGTAATTTATTATGGTTAGAAA
AGCGTCGACAAAAACAACCATTACAAAATAAATCCAGCCGTTTTATGGCATCTTTGACCGTGGGTATGTGTTTAGGCTCA
ATATTAGCCGTAATGATAACGATGCTTTCAAGTAAATGGTTGTATCTCATTAGTGATCAGGTTAATAACAATTACCTTAT
TTGTTATTACGTAGTATTTTTTAGCGCATTAATTTATAGTTTTGTTGTTGGTGCAGCTAAAAGTGCTATTTACTTACAAT
ACCTATTATTTGTGGCCTGTTTATTAATACCAATCACTTCTGTTGTGTCTTTTATTATGCCGAGCATAGGGTTGTGGGGA
CCCATTTACTTTCCCAGCATGGTCGTTGAGTTTATTGCGTTAGTTTTTGCGGGTGTATTTTATTATGGTGCGATTAAAAC
TAAACAGCGTGTTTATTATGGTGAACGTAATAGCATATGGGCTTTACCGTTAACAACCGCTACTGAGTAA

Upstream 100 bases:

>100_bases
CGTTTAGTTATTTATTTAAAACGGGTTTACATGCCATCGTTTATTTAACATTAGCGAATGTTGTGGTGTGTAACGTGTTC
TTTTTACTAAGGTGGTTAGC

Downstream 100 bases:

>100_bases
AATAAAGAATAAACTAAGTCACTCGTTATCAAGTGGATAACCAATACTATTGGTGCCGCTAATAACGAGAACTTAGTAAT
TTTTTCATAAGTAACTTTTA

Product: PepSY-associated TM helix domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>529_residues
MRVRGDILRTYQSIHTWTGIIAGLVLFIGFYAGSLTMFKEEITQWATPPSHQLPQVPKDQFDQLILQASTNFDKAQQSFT
VNFNQQLSPLTWFEQGGGRGLHLNNVMRHATLSDEGALVTQVNPTNELGELIDMLHRTAGIAGKAGHEDIGVLVLGGASV
LYFLALVSGVIFLLPTLVNSFLAIRKNKGVNRFWLDSHNLVGIISLPFHLIIAWTVIVFAFHDVLYGGLSLVYGDEPMFD
RGERSTIEYSIEQLPPISSYLQKVNEMTDGYHVESMAFSDLSTTNPMVGITIINEREMMRVNSGDFIYMNPYTFDVGYSS
IPLKDNDIYTPLVASFFSLHFGGYAGDLGRWVYFSLGLLGAFLFYSGNLLWLEKRRQKQPLQNKSSRFMASLTVGMCLGS
ILAVMITMLSSKWLYLISDQVNNNYLICYYVVFFSALIYSFVVGAAKSAIYLQYLLFVACLLIPITSVVSFIMPSIGLWG
PIYFPSMVVEFIALVFAGVFYYGAIKTKQRVYYGERNSIWALPLTTATE

Sequences:
NA

Specific function: NA

COG id: COG3182

COG function: function code S; Uncharacterized iron-regulated membrane protein

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA