Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 114564346

GI number:

Start: 3812904

End: 3814628

Strand: Reverse

Name: Not Available

Synonym: Sfri_3185

Alternate gene names: NA

Gene position: NA

Preceding gene: 114564347

Following gene: 114564345

Centisome position: NA

GC content: NA

Gene sequence:

>1725_bases
ATGAGCGAAATATGGTTGTTAGCGATTATCTTGTTAGCACTGGTCGGTGGACTTCTTGCTGGGCTTGCAACACCGGCCGC
CATGTTTTTCTTCGCTTCATTACTTTGTTATATCCTCGGGCTAGTTGATTTAAATGTAGCCCTTGGCAGCTTTACTAATA
ACGGACTAATCACTTTGGTGCTGTTGGTGCTGGCTGCCACAGCTCTCGAGAAAACCTCATTACTGGGCAAATTAAGCCAA
GTGATAGGGAAAGGCTCGTTATTTTCTACCCTGGCTAAGTTAGGTATATCGACGGCGTTGTTGTCGTCGTTTACCAATAA
TACAGCTGTTGTAGCATCGTTAATTGGCGTTGTGCGTCGTAATCAAGCGCATGCTCCTTCTAAGTTATTGTTGCCATTAA
ACTATGCTGCAATCCTCGGTGGTACGCTTACGCTCATTGGTACTTCTACCAATTTGATTGTTAACTCATTTGTTGAAAAT
GCTGGCCTTGAACCTCTGGGATTTTTTGAGTTTTCACAAGTTGGCGCATTAGTTGTCATAAGTGGTTTAGTCGTGTTGAC
CATAATGGCTAACTTTTTACCCGATAGACGTGAAGAGTCCGAAGATGAAGCATTGCCTTATCTATTGGAAGCCCATGTTG
CTAAAACCTCTACTTTAGTGGGTAAAAGTGTCATTGATAACCGTTTGCGCGCACTTAAAAAACTCTACTTAGTTGAATTA
GAACGCAGCGGTATACGTATTTGCCCTGTGCCACCACAAATGGTGCTGCAAGCCGATGACGTTTTGCGTTTTAGTGGCGC
GGTTGAGTCGGTTGAGCTATTGCATCAGTTTGATGGTTTAGAGTGGTTTGGTAAGCAGCATGCTAAAGGCCAAAATTTGG
TTGAAGCGGTTTTAGCGCCATCATCAAGTTTAGTTGGTACAACCTTAAAAGATTCGCGTTTTCGTGAAGTCTTTGATGCA
GCCGTAATGGCTATTCGTCGTGGTCATATTCCGTTAAAAGGCGGACTAGGCGATGTGGTGCTACAACCCGGTGATGTGTT
ACTGCTCACGCCTGGCGATCGTTTTTCTAAGAGCCCTAATTTAACCAGCGACTTTGCTGCAGTTAGCGGCTTAGATTTAA
GCGTTCGTTTAGATGAAAAACGCGGTAACTGGGTGCTTGTTGGATTTGCATTAACCATTTTGGCCAGCATTTTTGATGTA
TTACCTTTAGCCAAAGGCTTAGTTTTATTATTACTCAGCTACGTGGCGATTGGCGCGATAACCTTAAGTGAGCTTAAACG
TCGCTTCCCGTTAGAACTGGTGGTGATTGTAGGCAGTGCCTTAGGCTTAGCTAACTTAATGGTCACAACCGGCCTAGCAG
ACGTCATGGCGCAAACTTTATTGAGTGTGTTTAATGGCTATGGTGTGTTTGCCGCCTTTGTTGGGATTTATCTGATTACG
TTAATTGTCACCGAGTTGATAACTAACAACGCTGCTGCAGCACTGGCGTTCCCGGTGGCTTATGCGGTCGCGACCAGTTT
TGGTGTCGATCCTCGGCCGTTTATTATGGCGGTGGTATTTGGTGCAAGCGCGAGTTTTATTTCGCCTTACGGCTATCAAA
CTAATCTCATGGTATTTAATGCCGGTAATTATAAATTCAGCGATTTTGTGCGCTTAGGTTTACCGTTATCCATCGTATAT
TCATTAGTGGTTATTTTTTCGATCCCGTATTTCTTCCCGTTTTAA

Upstream 100 bases:

>100_bases
CACTGAGTTTAGTGCATTTGAAGTCGAGTTTAATACGTTAGTGCGTAAGCATTTCCCGCATTGGAATGCTCGCGATATTA
GCGTGCTTGGAAAATAAATA

Downstream 100 bases:

>100_bases
CAAAGAATTTTAGTGTGGTGTAACAACCATTCGATAGGAGTAGTGATGAGTAATATTGTTTGGCATCAACATGCCATTGA
CCAAGCTGCCCGTGGCGCCC

Product: TrkA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>574_residues
MSEIWLLAIILLALVGGLLAGLATPAAMFFFASLLCYILGLVDLNVALGSFTNNGLITLVLLVLAATALEKTSLLGKLSQ
VIGKGSLFSTLAKLGISTALLSSFTNNTAVVASLIGVVRRNQAHAPSKLLLPLNYAAILGGTLTLIGTSTNLIVNSFVEN
AGLEPLGFFEFSQVGALVVISGLVVLTIMANFLPDRREESEDEALPYLLEAHVAKTSTLVGKSVIDNRLRALKKLYLVEL
ERSGIRICPVPPQMVLQADDVLRFSGAVESVELLHQFDGLEWFGKQHAKGQNLVEAVLAPSSSLVGTTLKDSRFREVFDA
AVMAIRRGHIPLKGGLGDVVLQPGDVLLLTPGDRFSKSPNLTSDFAAVSGLDLSVRLDEKRGNWVLVGFALTILASIFDV
LPLAKGLVLLLLSYVAIGAITLSELKRRFPLELVVIVGSALGLANLMVTTGLADVMAQTLLSVFNGYGVFAAFVGIYLIT
LIVTELITNNAAAALAFPVAYAVATSFGVDPRPFIMAVVFGASASFISPYGYQTNLMVFNAGNYKFSDFVRLGLPLSIVY
SLVVIFSIPYFFPF

Sequences:
NA

Specific function: NA

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA