Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114564276

GI number:

Start: 3725052

End: 3726479

Strand: Direct

Name: Not Available

Synonym: Sfri_3114

Alternate gene names: NA

Gene position: NA

Preceding gene: 114564275

Following gene: 114564277

Centisome position: NA

GC content: NA

Gene sequence:

>1428_bases
ATGTCGGTTTTCTTGTCTCGTACCCGTGAAGCGTTATCGGTTTACTACCACAAACGAGTATTTATTTTACTCTTGCTGGG
GTTTTCTGCCGGCTTACCATTAATGTTAGTCTTTTCGACCTTAAGCTTTTGGTTACGTGAAGCAGGCATCGACCGAGCGG
CGATTGGTTATTTTAGCTGGATAGCACTAACGTATGCATTTAAATGGGCATGGTCACCATTAGTCGATCGTATGTCATTG
CCCTTTTTTACCCGCTTTTTAGGAAGACGACGCGGATGGATGCTGTTCGCACAACTGTGCTTAGTCGGCGCCATACTCGG
TATGTCTGTTAGCGATCCAGTGGTTAATCTTGAACGTTTGGCCTTATGCGCCCTACTTTTGGCATTTGCCTCCGCCACCC
AAGATATTGTTATCGATGCTTTTCGGATTGAATCCGCCCCAGAAAAAATGCAAGCAGCGCTTGCTGCTGCGTACCAAGTC
GGTTATCGCAGTGCGATGATCATCGCCACAGCAGGCGCATTAACCATTGCAGCTTGGGTGTCTCCTGGCGATGATGCTTA
CAACTTAGAAGCTTGGCAGACCGCCTACTTTGCCATGGCGATGTTAATGGGTGTTGGTATTATTACCACGCTATGCAGTA
AAGAACCGCAAGTCGATACCAAACAGGCTGACGATAAAGAACGCCTATTAAGAGCCGAGTTTGCTGCCAAATACCCTGCT
AAAGTCGCAGGAGCATTAGCCTGGTTATACAGCGCAAGTGTATTGCCTTTTATTGACTTTTTTAAGCGTTATGGCAAAAG
CGCTATTCTCATTTTGTTGTTAATCTCGTGCTATCGCATTTCCGACATTGTCATGGGTATTATGGCAAATGTGTTTTATG
TTGATATCGGGTTTAGCAAAGAAGAAATCGCTTTTATCAGTAAAGTCTATGGTTTGATCATGACCTTAGTCGGCGCCGCT
TTTGGTGGTGTGTTGCTGATGCGTTATGGCACCATGAAGATTCTATTCTTGGGTGCCTTGTTAGTCGCGGTCACTAACCT
GCTGTTTGCTTGGCAAGCGTATATTGGCTACAACGTGCCATTTTTAACCTTAGCCATATCGGTAGATAATTTTAGTGCTG
GTATCGCAACCGCAGCGTTTATCGCTTATTTGTCCAGCTTAACCAGTAGTGGATATAGTGCGACACAATACGCGTTATTG
TCTTCGATTATGTTGTTGTTCCCTAAGTTTATCGCAGGATTTTCGGGCTTGTATGTTGATGCTTTTGGTTACATCAATTT
CTTTATTGCAGCGAGTTTGATTGGCTTTCCGGTGTTGCTATTAGTGGTGTTGGTGAATCGATCGCAAAACCAAGTGTTGA
TTGCCAATGCGGCATCAACAGAGGGATCTATCGATGTGTCGACAGATGTTGGTAAACCACCACTGTAA

Upstream 100 bases:

>100_bases
CTAATTTAACCTCAAACTGACTGAATAATCTTTTAGAATGGCTTGAACCTAAACCCCTTGCAACATAAGCTAGAGCCATT
CTCCTTTATCCAGTTGTCTT

Downstream 100 bases:

>100_bases
GCGATTAATATCCGAACTGTATTGGGTTTAAGTGCAAAAGAGTTGGCCTACCGCAGCACTTTACGTTCACGTTTCAATGG
CTATAAAAGTAGTAATATTG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>475_residues
MSVFLSRTREALSVYYHKRVFILLLLGFSAGLPLMLVFSTLSFWLREAGIDRAAIGYFSWIALTYAFKWAWSPLVDRMSL
PFFTRFLGRRRGWMLFAQLCLVGAILGMSVSDPVVNLERLALCALLLAFASATQDIVIDAFRIESAPEKMQAALAAAYQV
GYRSAMIIATAGALTIAAWVSPGDDAYNLEAWQTAYFAMAMLMGVGIITTLCSKEPQVDTKQADDKERLLRAEFAAKYPA
KVAGALAWLYSASVLPFIDFFKRYGKSAILILLLISCYRISDIVMGIMANVFYVDIGFSKEEIAFISKVYGLIMTLVGAA
FGGVLLMRYGTMKILFLGALLVAVTNLLFAWQAYIGYNVPFLTLAISVDNFSAGIATAAFIAYLSSLTSSGYSATQYALL
SSIMLLFPKFIAGFSGLYVDAFGYINFFIAASLIGFPVLLLVVLVNRSQNQVLIANAASTEGSIDVSTDVGKPPL

Sequences:
NA

Specific function: NA

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA