Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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The map label for this gene is Not Available

Identifier: 114564258

GI number:

Start: 3700647

End: 3703202

Strand: Reverse

Name: Not Available

Synonym: Sfri_3096

Alternate gene names: NA

Gene position: NA

Preceding gene: 114564260

Following gene: 114564256

Centisome position: NA

GC content: NA

Gene sequence:

>2556_bases
ATGATGCAATCAAAAAAATCTAAATTTGGTATTAGCTCTTTGAGCTTAGCCATTTCATTTGCACTTGCCGGATCTGTTGC
AAGTGCTCAAGCATTCGCAGCCGATGAAGAAGTCGCAAAGAAAGAAAACGTTGAAAAAATCGCAGTAGTCGGTTCACGTG
CAGCACCTCGTTCAATTGGTGATTCACCGGTTCCAATTGATATCATTAGCAGTGATGACCTAAAGAAAAACGGTTCGACT
GACATGATCGACATGTTAGTGACATCAGTGCCTTCTTTTAACTCTCGTGCACAACCGATTAGTGATGCAGCAACGTTAGT
TCGTCCGGTTAACTTACGTGGTTTACCATCTGACAGTACACTTATTTTGGTTAACGGCAAACGCCGTCATCGTGCGTCAG
TTATTGCTTTCCAAGGTGGTGGCATTAACGATGGTGCACAAGGGCCAGATATTTCGGTTATTCCTGGTGTGGCATTAAAG
CAAGTTGAAGTATTACGTGACGGTGCAGCAGCTCAGTATGGTTCGGATGCGATTGCTGGTGTGATGAACTTTGTATTAAA
AGATGCCTCTGAAGGTGGCTCTATCACTGTCAGCCAAGGTGAATACTACGAAGGTGACGGCGCAGCAACAACAATTGACG
GTAACATTGGTTTACCTTTGACTGATGATGGCTTTGTTAATATCAGTGCACAATATAAAACCGCAGATGCGACTAGCCGT
AGTGTCCAGCGTCCAGATGCAGCAGCCATTGCTGATGCTGGTAATACCTCAATTCTTAATCCTGCGCAAACTTGGGGTAA
TCCAGAGATCAATGATGATTTTACTGTATTCGTAAACTCTGGTTTTGATATCAATGATAACACTCACTTGTATGCATTTG
GTAACGTGTCATCACGTGAAGCAACAGGTGGTTTCTATTATCGTAATCCACATAACCGCGGTAACGTTTATTCAGTAGAT
GGTGGTGAAACATTATTAGTGGGCGCTGTTAATGGCGACCAATCAACCTGTGGTGTCGTACCAGCAAATGTTCCAAACGT
GCTTGATACTCCTGAGTATCAAGCAATGGTTGCCGATCCTAACTGTTTCTCAATGAACCAAATTCGTCCAGGCGGGTATA
CACCACAATTTACCGGTAAAATTGAAGATATGTCTTTCTTCGCTGGTGTTAAAGGTGAGCTAGGCGAGTGGATGTATGAT
GCCAGTGCGGGTACCGGTAGCAACAAAGCCAGCTTTGGTTTAAAAAATTCTCTTAACCCATCATTGGGTTTAGACACGCC
AACTGACTTTGATACCGGTTCTTACGAGCAAGTAGAAACAACTGTTAATATCGACTTTAGCCGTTTCGTTACTATTGGTA
GCTTAGAAGATATTAGTTTTGCTACTGGTTTTGAATGGCGTGAAGAATCATTCGAAATTGGTCAAGGTGATGACGCCTCT
TGGACTGCAGGCCCTTATGCCGATCAGGGATTCAATATTGGCTCACACGGCTTTAAAGGCTTTGGCCCTGAATCAGCCGG
TAAAAACGACCGTAATAACATTGGTATTTATACTGACGTTGAAGCGTATTTAACCGAAGATTTCTTATTAGGTATTGCAC
TTCGTTATGAAGATTTCTCTACTTTTGGTGACACACTAAACTACAAGTTAACCGCGCAGTATGTTGCAACCGATGAATTA
TCATTCCGTGCATCACACAGTACTGGTTTCCGTGCGCCAACTGTTGGTCAAGAAAACGTAGTTAACACTCAAACATCGAT
TGTTAACGGTGACTTGATTCAAACCTTCATTGCTCCACCAACAAACCCATTAGCGGCTTTCTATGGTGGTGAAGTTCTTA
ATCCTGAAGAGTCTGTTAGCTTTGCAGCAGGTTTCGTCTACCAATATGATAACTTGTTCTTAACTGTTGATTACTACAAC
ATTGAAGTTACTGGTCGTATTGCACAATCTAGTCAAATCTCGGTTGAAGCAAGTGACTATGATGCATTACGTGCTGCTGG
TGTTGAATTCCCTGAGTTGATCTCTGCGGTAACCTTCTACACTAATGACTTTGATACAACGACTCAAGGTGTTGATGTTG
TAGCGTCTTATACTACAGAAATGCTATCAGGTGATGCTAAGTTCAGTTTAGCTTATGGTTGGACTGATACCAGTGTTGAT
AAATATGACCCTGAAACAACAGATGCAGGTAAAGTTCGTCGTTTAGAAGATGGTATTCCTGCACACCGTGCAACCCTTAC
TTGGGGCCAAAGCTGGGATGATTTAAGCATGTCAGTTCGTGGTAATATGTATGGTGAATATTACGCTACACACGCTGATG
ATACCTCTGATTGGGGTTCTGAAGTGGCAGACGCTGCAGTGACTATCGATCTTGAAGTGAGCTATGCGGTACTTGATAAC
CTAACGGTATCAGTGGGCGCAAACAATATCTTCGATCAAGAAGCGCAGAAGCTAAAAGATGGCACTTTGGGTGAATTAGG
TGCAGTGTACTACGAGAGTGGTCCATTTGATTACAACGGTGGTTTCTACTACGGCCGTGTTAATTACCGGTTCTAA

Upstream 100 bases:

>100_bases
CGAGATAGGGAGTGTTTCGATAGGGAGAGACATGTTTTTCATTCATTTTGTGAAAAATATCGTCGACAAACAACAATAAT
AAGCAGTTGAGAACATAATA

Downstream 100 bases:

>100_bases
GCGTTAGCGACATTCAAAAAACCAATCAAAAACTAAAAAGACTGCTTCGGCAGTCTTTTTTATTGAGAGCATTTTTTAAG
AATTTTTCTTGAAGACTAAA

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>851_residues
MMQSKKSKFGISSLSLAISFALAGSVASAQAFAADEEVAKKENVEKIAVVGSRAAPRSIGDSPVPIDIISSDDLKKNGST
DMIDMLVTSVPSFNSRAQPISDAATLVRPVNLRGLPSDSTLILVNGKRRHRASVIAFQGGGINDGAQGPDISVIPGVALK
QVEVLRDGAAAQYGSDAIAGVMNFVLKDASEGGSITVSQGEYYEGDGAATTIDGNIGLPLTDDGFVNISAQYKTADATSR
SVQRPDAAAIADAGNTSILNPAQTWGNPEINDDFTVFVNSGFDINDNTHLYAFGNVSSREATGGFYYRNPHNRGNVYSVD
GGETLLVGAVNGDQSTCGVVPANVPNVLDTPEYQAMVADPNCFSMNQIRPGGYTPQFTGKIEDMSFFAGVKGELGEWMYD
ASAGTGSNKASFGLKNSLNPSLGLDTPTDFDTGSYEQVETTVNIDFSRFVTIGSLEDISFATGFEWREESFEIGQGDDAS
WTAGPYADQGFNIGSHGFKGFGPESAGKNDRNNIGIYTDVEAYLTEDFLLGIALRYEDFSTFGDTLNYKLTAQYVATDEL
SFRASHSTGFRAPTVGQENVVNTQTSIVNGDLIQTFIAPPTNPLAAFYGGEVLNPEESVSFAAGFVYQYDNLFLTVDYYN
IEVTGRIAQSSQISVEASDYDALRAAGVEFPELISAVTFYTNDFDTTTQGVDVVASYTTEMLSGDAKFSLAYGWTDTSVD
KYDPETTDAGKVRRLEDGIPAHRATLTWGQSWDDLSMSVRGNMYGEYYATHADDTSDWGSEVADAAVTIDLEVSYAVLDN
LTVSVGANNIFDQEAQKLKDGTLGELGAVYYESGPFDYNGGFYYGRVNYRF

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA