Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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The map label for this gene is Not Available

Identifier: 114563809

GI number:

Start: 3167455

End: 3169095

Strand: Direct

Name: Not Available

Synonym: Sfri_2643

Alternate gene names: NA

Gene position: NA

Preceding gene: 114563808

Following gene: 114563811

Centisome position: NA

GC content: NA

Gene sequence:

>1641_bases
ATGACCTCGAAAATCACCCGTCAAGCAAACGCTTCAGAAGACAGTTTACTGCGTATTTTTACCGCCCCTGAAGATTCAAC
CTCGACGTTGAGCATTATTGAGCAAAAGCTATCTCAAGACCTCGCGGGTTTTTTAGGTAATAGCATCGCCGCACTGGAAA
AACCACTGTCAGAAATTGAAACCGACTTTAGCGCCTATCAGATCCCAACAGAACCCAAGTTCGTTTCTGATTATGCCGAC
GAAATAATGCAAAACCTAGTCGCTCATTCAGTCCATACTTCAGCACCCAGTTTTATTGGACACATGACCTCGGCCTTGCC
TTATTTTGTGTTACCACTGTCAAAAATGATGGTCGGGCTAAACCAAAATTTAGTCAAAATTGAAACATCCAAAGCCTTTA
CTCCATTAGAACGCCAAGTGTTAGGCATGATGCATAATTTGGTGTATCAGCAATCTGATGATTTCTATCATCAATGGATG
CACAGCGCTAACCACTCACTCGGGGCATTTTGCTCAGGTGGCACCGTTGCTAATATCACCGCACTGTGGATTGCCCGAAA
CCGGCTGCTACAACCACGCGGCGATTTTAAAGGCGTCACCCGCGAAGGAATGACGAAAGCATTGCGCTTTTATGGCTATG
ATGACCTTGCTATTTTAGTGTCAGATCGCGGTCATTACTCTTTGGGTAAAACTGCCGACTTGCTGGGTATTGGCCGAGAT
AACATCATTAGCATCCCAACAGATGAACATCATAAAGTCGATGTTGCCGCCATGCGAGATGCAGCAGAAAAGCTGGCACA
ACAAAATATTAAAGTGATGGCCATTGTCGGTATCGCTGGCACAACAGAAACAGGCAATGTGGATCCCTTAACTGAATTAG
CAGCGTTAGCCAGCGAGCTAAATTGCCATTTTCATGTCGACGCTGCCTGGGGCGGCGCGAGTTTATTATCTAAAAAATAT
AGCCACTTATTGAAAGGCATCGAATTAGCTGACTCCGTCACTATCGATGCTCATAAGCAAATGTATGTTCCAATGGGCGC
TGGTATGGTGCTATTTAAAGATCCTGAACTGGCTAAAGCCATAGTGCACCATGCTGAATATATTCTACGGGTAGGTTCAA
AAGACTTAGGCAGTCAAACGCTGGAAGGTTCGCGCCCAGGGATGGCAATGCTAGTGCATGCTTGTCTTCAGATTATTGGC
CGTGATGGCTATGAAATTCTCATTAATAACAGCCTAGAAAAAGCCCGTTACTTTGGATCAATCATCGACCAACATGCTGA
CTTTGAGTTAGTCACAGCACCGGAGTTATGTTTACTGACCTATCGCTATGTACCAAAATCGGTGCAAGCTATACTCACTA
CAGCTCTAGCCAACCAAGACAGCGCTTTAGTTGCATCAATCAATGAACTACTCGATGGACTGACACAATTTATTCAAAAG
CATCAACGCGAACAAGGTAAATCGTTTGTGTCACGCACACGTATTAAACCGGCAAAATACTTACGCCAACCAACGACAGT
ATTTCGTGTGGTACTGGCCAATCCGTTGACCAGTCATCAAATATTGCATGATGTACTGACAGAACAAGTTGAGATAGCCG
CATTAGACAGCGAATACTTACCCCAGTTGTTGGCGTTGTAG

Upstream 100 bases:

>100_bases
GTAAAGTTAGCACCCTCATTTCGTCCTGAAGGTGCAGCGTTAATCGTAAAGCACCCGTCAATGCTATCAGGATGAAGTTT
TCATCATTACGGCAAGCAAA

Downstream 100 bases:

>100_bases
AGCACAGACTCATCAATAACTTCGATGTTTATAGCTTGTTAGCTACCTTCTCGTCATCCCGGCAGTGTTTTTAAGCCGGG
ATCCAGATGTTTTCATTGTA

Product: pyridoxal-dependent decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>546_residues
MTSKITRQANASEDSLLRIFTAPEDSTSTLSIIEQKLSQDLAGFLGNSIAALEKPLSEIETDFSAYQIPTEPKFVSDYAD
EIMQNLVAHSVHTSAPSFIGHMTSALPYFVLPLSKMMVGLNQNLVKIETSKAFTPLERQVLGMMHNLVYQQSDDFYHQWM
HSANHSLGAFCSGGTVANITALWIARNRLLQPRGDFKGVTREGMTKALRFYGYDDLAILVSDRGHYSLGKTADLLGIGRD
NIISIPTDEHHKVDVAAMRDAAEKLAQQNIKVMAIVGIAGTTETGNVDPLTELAALASELNCHFHVDAAWGGASLLSKKY
SHLLKGIELADSVTIDAHKQMYVPMGAGMVLFKDPELAKAIVHHAEYILRVGSKDLGSQTLEGSRPGMAMLVHACLQIIG
RDGYEILINNSLEKARYFGSIIDQHADFELVTAPELCLLTYRYVPKSVQAILTTALANQDSALVASINELLDGLTQFIQK
HQREQGKSFVSRTRIKPAKYLRQPTTVFRVVLANPLTSHQILHDVLTEQVEIAALDSEYLPQLLAL

Sequences:
NA

Specific function: NA

COG id: COG0076

COG function: function code E; Glutamate decarboxylase and related PLP-dependent proteins

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA