Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114563641

GI number:

Start: 2945933

End: 2948806

Strand: Direct

Name: Not Available

Synonym: Sfri_2471

Alternate gene names: NA

Gene position: NA

Preceding gene: 114563639

Following gene: 114563642

Centisome position: NA

GC content: NA

Gene sequence:

>2874_bases
ATGCAAGCTAATTCACATTTAGCCAAAGCTATTCGCTTTGCGCTAATCAGTGGCGTTGCCGTTTCTGCAGCAACCACATT
CAATACTGTTGCAGCAGAAGACGCAGCGAATACTGCACCTGCTGTCGAGAGAATCTCGGTAACGGGCTCACGAATTATTC
GTGAAGGTGCTGTTGCACCAACGCCAGTTACAGTAATTACTGGCGACGAGTTATTATCAACTGGTGTAACAAATATTGGT
GAAGCGCTAAACCAATTACCTGCACTAGGTAACACCTACTCACTTGCCAACTCAGGCCGCTTTATTGGTACTTCGGGTCT
TAACTTACTCGATTTAAGAAGCATGGGTACCGCCAGAACACTCGTGTTAGTGGACGGTAAACGCCATGTATCAAGTTCTG
CAGGTACTTCTTCAGTCGACGTCAATACCATTCCAAGTGTATGGATCGATAGAGTTGAAGTAATTACCGGCGGTGCATCT
GCAATTTACGGTGCCGATGCGGTAACCGGTGTTGTAAACTTCATTTTAAAGAAAGATATTAATGGCTTAGATGTATCTGC
AACCAAAGGTTGGGCTGACGATAGTGGTCACAATAAAGACCGTTTCTCATTATCTTATGGTTCTGATTTTGCCCAGGGTG
ATGGTAACGTTGCCTTTGCGGTTGAGTACAGCGCTCAAGAGCAATTAAGAGCATTTGATCGCGATCAGACTTCAACTGCT
TTTTCGAGCCTAGCAAATAAAAACCGCACTGAAGATAATAATGACCCATCAGATCCAGACAAAATATGGACTCCTAATGC
AGGTCACTACACAATTAGTAATGCCGGTACCTTCAATTTAGATGGTTGGAAAAGCTTTAACCCTGATGGCTCATTAAGCG
ATGTTTATAGCGGTCAAAATGTTGATGGTATTCGTTGTGCAAATTGCGATGTCACTAACTTAAACCAGTTTGTAGAATTA
CAACCTGAATTCGAACGTTACAATATTAACTTTAAAGCAAACTACCAGCTTAACGATAATCATAACGTTTATTTTGAAGC
TAAATACGTTAACAGCCAATCAACAGATGAAGGTCAACCAGCATTTTTCTTTGGTAATCCGGTTAACGATATCAAAATTG
ATAACGCTTTTATCAATCCTGAACTGGTTGCTTTAATGAAAGCAAACAAGGATAGCGACGGTAATTCAGCGCCATTAGAT
ACACTTAATATTCGTCGTTTTATGACGGACTTGGGTGCGCGCATTGAAGATGATACTCGCGAAACTCAACGTTATGTTAT
CGGTCTTGAAGGTATAGTATTCCAAGATTGGGATTACGATGCCTATGCTATTTATGGTCAAACTGATTTAGAGCGCGTTA
ATAAAAATAACTTAATCTATGACAATTACACCAACGCCCTTGATTCTGTATTAGAAAACGGGATTGCGGTTTGTCGTGAT
CAGTCAGCTAGAGATGCAGGCTGTGTGCCAGTCAACATTTTTGGTTTTGGCGCACCAAGTCAAGATGCGATTAATTATAT
TAATACCGCTTCAACTGGTACATCGATTATTAAGCAAACCGTATTAGGTGGCTCACTAACTAACTCTAGTTTATTTGAAT
TACCTGCCGGTTATGCAGGCTTCTCTACTGGTGTTGAATACCGTAAAGAAGAAAGTGAGATATTTGAACCTTCAAATGCA
GCAGGTACTTTCTTCAATGCATTAGGCGAAGATAAAGGCGATTTTGATGTAAGCGAAATCTTTGCTGAAATCACGCTTCC
TTTGTTAGCCGATTTACCAATGGTACGTCAGCTAGACTTAGATCTTGCAATACGCTTTGCTGATTACAGCACCATTGGTA
ATGCTACAACATGGAAAACGGGTTTAAGCTGGGAAGTTGATGATCAGATCCGCGTTCGTACTACATACTCAGAAGCTATT
CGTGCACCTAACATCAGTGAGCTTTATGGTGCTGCAAGCCAAACATTCTTCTCTGTAGATGACTCTTGTCGTGCTAAAAA
CTTAAATGATCTGGCTGATCCAACTCAACGCCAAGCTAACTGTGCGGCGTTAGGGATCCCTGCTGGTTTTGACGCTGACT
ACGACGATAAAACGCTTGAAGGATTAAGTGGTGGTAATCGCGAGCTACAAGCAGAAGAATCGAAAAGTTTCACGTTAGGG
ATTGTTTATCAACCTGATTTTATTGATGGTTTATCGATCACTACCGATTATTGGAATATTGAGATCGAAAATGCCATCAG
TGCTGTTGGCGCCCAAGATATTATCGATCGTTGTGTTGATTCTAAATCTGGTGTGAATAATGAATACTGTAGTTTGATTA
CTCGTGATTCAACTAGCCACGAAATCACTCAAATTAGACAGTTCTCGTTGAACATTGCGTCGCTTGAAGCTGCTGGTATT
GACTTTGATATTGGTTATAACTTTGAAGCCTTTAGTGGTGACGTACGCACTAACCTTATTGCGACTCGTCTACTAAAACG
TAAAGACTTTTCATTCCAGGATGAACCAGATACCTTTGAAGAACTTGCAGGCACGGCTGGCTATGCTGAATGGCAAGCAA
ACTGGAGCCTAAGTTACTCAATCGATAGCTGGGATGTTAGCTGGAGAACGCGCTATGTCGAGGGTGTAAGCCTTTATACT
GATAAGGAATTAGCCTTAAACGCGAATCCTAATAGCAACATGGAATTTGGCGATTACTTTATCAACGATATGGCAGTTGC
ATACAACTTCGATTCAGGTATTAGATTGAAGTTTGGTATCGACAACGTGTTTAACCGTGAATTACCTTACGGCTACACAG
GTACTGATACTGATAGTTCAGCTTACGATAACGTTGGCCGTTTCTTCCATACTACGGCTACTTACAAGTTCTAA

Upstream 100 bases:

>100_bases
TGTGCTTATATCAATAGCTGTGTAACTTTGTTTCATTTTTATATTAAAAATGATCTCAATGATTACATCATAATAAAAAA
ATATTTCAGGGAGTTAAAAT

Downstream 100 bases:

>100_bases
ACTATTCGTTATAAGCGATAGGTTTATTTGTAATAACGGCATCTTCGGATGCCGTTTTTTTATGTCTATAAAATTATTTT
AAATATCGCCTAGCAATAAA

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>957_residues
MQANSHLAKAIRFALISGVAVSAATTFNTVAAEDAANTAPAVERISVTGSRIIREGAVAPTPVTVITGDELLSTGVTNIG
EALNQLPALGNTYSLANSGRFIGTSGLNLLDLRSMGTARTLVLVDGKRHVSSSAGTSSVDVNTIPSVWIDRVEVITGGAS
AIYGADAVTGVVNFILKKDINGLDVSATKGWADDSGHNKDRFSLSYGSDFAQGDGNVAFAVEYSAQEQLRAFDRDQTSTA
FSSLANKNRTEDNNDPSDPDKIWTPNAGHYTISNAGTFNLDGWKSFNPDGSLSDVYSGQNVDGIRCANCDVTNLNQFVEL
QPEFERYNINFKANYQLNDNHNVYFEAKYVNSQSTDEGQPAFFFGNPVNDIKIDNAFINPELVALMKANKDSDGNSAPLD
TLNIRRFMTDLGARIEDDTRETQRYVIGLEGIVFQDWDYDAYAIYGQTDLERVNKNNLIYDNYTNALDSVLENGIAVCRD
QSARDAGCVPVNIFGFGAPSQDAINYINTASTGTSIIKQTVLGGSLTNSSLFELPAGYAGFSTGVEYRKEESEIFEPSNA
AGTFFNALGEDKGDFDVSEIFAEITLPLLADLPMVRQLDLDLAIRFADYSTIGNATTWKTGLSWEVDDQIRVRTTYSEAI
RAPNISELYGAASQTFFSVDDSCRAKNLNDLADPTQRQANCAALGIPAGFDADYDDKTLEGLSGGNRELQAEESKSFTLG
IVYQPDFIDGLSITTDYWNIEIENAISAVGAQDIIDRCVDSKSGVNNEYCSLITRDSTSHEITQIRQFSLNIASLEAAGI
DFDIGYNFEAFSGDVRTNLIATRLLKRKDFSFQDEPDTFEELAGTAGYAEWQANWSLSYSIDSWDVSWRTRYVEGVSLYT
DKELALNANPNSNMEFGDYFINDMAVAYNFDSGIRLKFGIDNVFNRELPYGYTGTDTDSSAYDNVGRFFHTTATYKF

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA