Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114563610

GI number:

Start: 2902797

End: 2905274

Strand: Direct

Name: Not Available

Synonym: Sfri_2440

Alternate gene names: NA

Gene position: NA

Preceding gene: 114563606

Following gene: 114563611

Centisome position: NA

GC content: NA

Gene sequence:

>2478_bases
ATGACGCCATTACGTTTATCTCTACTTGCCCTTGCTTGTCAAAGTGTATTGTTTCCCGTTTATGCTCACGCACAAACACC
AGTTGCCCAATCTGAGGTTGCTGCACAATCTTCAAATGATACGGCCAATGAATCACCCTCAGCCAGCTATGAACGAATAA
CGGTTTATGGCCGACAAAACCAAGTAGTGATGAACTCAGGTTTAGCAACCAAATCTGATATGTCGCTGATGGAAACGCCT
GCGGCGGTAGTGATTGTTGATGAAGCATTAATTGATGCGCAAGGCATCACCAACATGCAAGATTTAGTTCGTAATATCAG
CGGCGTAACCCAAGCGGGTAATAATTATGGTATTGGCGACAATTTAGTTGTTCGCGGATTAGGCGCCAACTACACCTACG
ATGGTATGTATGGCGGTGCAGGATTAGGTAACACCTTTAATCCAACTCGTTCGCTAACCAACGTGAGTTCTGTTGAAGTA
CTCAAAGGCCCTGCCACTGGTCTATATGGTATGGGCAGCGCGGGTGGCGTGATTAACCTTATTGAGAAAAAACCTCAATT
TGACAGTAAACAGTTGTTTGAAGCTGAAGTGGGTCAATGGGATAGTTATTCTCTCATGGCTGATTCTACGGGCGGAATAA
CTGACGATTTAGCCTATCGCCTCGTGGCAAAAACGGCTCGTAGTACAGGTTATCGAGATCTTGGTACCGACCGCGATGAA
ATATACGGCTCGCTTAAATATGTATTGAATGAAAACCAAAATATTATGCTATCAACAGCATATATTAGCGATGCGATCCC
CGTTGATTCAATCGGCCATCCTATCCGCATTTATAACGCAGCTTCAGTCGATGGGAAAACCGCTGGTGAAGTCAGCTGGC
AAGACTTAGTCAACGACCCTACCAGTAAGGGTTTACAACTAACAGACGATCAGCGCCAACAATTAACCGACTCGTTAAGC
GCAAATGATGGCCTAACACCGTATGAGTTTGGTCATAACGGTCTTATTTCTCCAATGGCGAAAGACAATGAAGGCGAAGA
GTTGCGCTTTAAACTAAGCCATAATGTGTACTTAACCGATGACTTATTTTTAAACCAACAACTGCAATACCGTAATTACG
AAACCAGTTTTGCTCGTCAAACAGGGGCTTACAACTATGTTTACTGGCAACGTAGTGGCGTAATTAACGCCGACCCACGC
GCACCTTTGGTTGAAGATGGCACCCTATATCCATATGCAGCTCGTCGTCAGGAATACCGCAAAGTCTCGGCAGAAGAAAA
GTCATGGCAGTATTTTGCCGACTTACGTTATGACTTCGACATTGGCAATATCAGTAACGAATTATTAGTTAATGCTAACT
TTGAAGATCGCGATATTCGCTTTAAACAGTATTCAATTTACGACGCAGATTACACCTTGAAAGATTCCGATGGTAATTTG
TCATATCAAGGTTCGCTACCGTATATTTATGATATCCGTAACCCAAATTGGGGCGAAGGTGAATTTGAAGACTACGATCC
ATTATTAACCAGTAACTACAATAAATCTGTCACAGCTTGGGGCTTGGGCTTACAACATGTGGGTTATTTAGGTGGCGGAT
TTACTAGCCGTATTGGTGTCGCATTCAATGAAATTAAACAAAGTTATGAACACTTGGGTGTCGATGCTCGTTACAGTAGT
AGCTTAGCAGACCCTCAACCAGAAGCGGATACCACAGATAACGGTGTAACCTACAATTTAGGCCTAACTTATATGCCTAC
TGACGATATCTCTATTTTCGTGAATCATTCTAAAGGCCGTACAGCATACAGTGTGTTAGGCGATGTAACAGGCAATGAAG
CAGACCGTGAAGATTCTCAGTCGATCAGTAATGATTTAGGTATTCGTGCCAAAGCATTTGATGATCAATTGCTCGCATCT
TTGGTCTTTTTCAAAACATCACGTACTAATGTGGCTTATACCAATCCAGAATACGAAAGCAGCGAAGCAACACCTGATAT
CTTCCCGTATTTTTACGACGGCAGCGAAGATACTAAAGGGGTGGAGCTAGATCTGAATGCATATTTAAGTGACCAATGGA
AAGTCAACGTTAACGCGGTTTACCAAGATGCTAGAGACAATCAAAATCCAAATAGCAGTGATTATGGCCAACGCCAAAAA
GGTGTACCTTACGTCACAGCGGGCGCTTGGGTAACTTATGCCGCAGAATTTGGCTTACCAGCACCGGTATCAATCAGTCT
TGGGGCTAAATATGTCGATGAACGCAGCACACACTCTAGCTCATTTGGTATTCCAGATGGTTATGTGCCAAGTTATACGG
TAATCGATTCAGCGATTAGTTATGACGTTGAAAGTTATAAAATCCAATTGAACATTAATAACTTATTTAATGAAACATAT
TACGATAAGGCGATGTTCTTAGGCGGATTACCCGGCGAAGAGCGTAATGCGAAGTTAACCCTAACTTATCGTATTTAA

Upstream 100 bases:

>100_bases
CCAAAACCCGTTTTTTGCCACATATAACAAAACCCGCTATTGCAATACTTATGATAATCATTATCATTCGCGCCATTGTT
AATAAAGAGCCTAACCTGTT

Downstream 100 bases:

>100_bases
AAACATATCAATCTGGATTTTGCTTGCTCGAAATCTAGATCTCAATTTAGCGCTAAATCTAACGCTAAATAGAGTAACGA
GATGATGAAAGCACTGCCTG

Product: TonB-dependent receptor, plug

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>825_residues
MTPLRLSLLALACQSVLFPVYAHAQTPVAQSEVAAQSSNDTANESPSASYERITVYGRQNQVVMNSGLATKSDMSLMETP
AAVVIVDEALIDAQGITNMQDLVRNISGVTQAGNNYGIGDNLVVRGLGANYTYDGMYGGAGLGNTFNPTRSLTNVSSVEV
LKGPATGLYGMGSAGGVINLIEKKPQFDSKQLFEAEVGQWDSYSLMADSTGGITDDLAYRLVAKTARSTGYRDLGTDRDE
IYGSLKYVLNENQNIMLSTAYISDAIPVDSIGHPIRIYNAASVDGKTAGEVSWQDLVNDPTSKGLQLTDDQRQQLTDSLS
ANDGLTPYEFGHNGLISPMAKDNEGEELRFKLSHNVYLTDDLFLNQQLQYRNYETSFARQTGAYNYVYWQRSGVINADPR
APLVEDGTLYPYAARRQEYRKVSAEEKSWQYFADLRYDFDIGNISNELLVNANFEDRDIRFKQYSIYDADYTLKDSDGNL
SYQGSLPYIYDIRNPNWGEGEFEDYDPLLTSNYNKSVTAWGLGLQHVGYLGGGFTSRIGVAFNEIKQSYEHLGVDARYSS
SLADPQPEADTTDNGVTYNLGLTYMPTDDISIFVNHSKGRTAYSVLGDVTGNEADREDSQSISNDLGIRAKAFDDQLLAS
LVFFKTSRTNVAYTNPEYESSEATPDIFPYFYDGSEDTKGVELDLNAYLSDQWKVNVNAVYQDARDNQNPNSSDYGQRQK
GVPYVTAGAWVTYAAEFGLPAPVSISLGAKYVDERSTHSSSFGIPDGYVPSYTVIDSAISYDVESYKIQLNINNLFNETY
YDKAMFLGGLPGEERNAKLTLTYRI

Sequences:
NA

Specific function: NA

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA