| Definition | Shewanella frigidimarina NCIMB 400, complete genome. |
|---|---|
| Accession | NC_008345 |
| Length | 4,845,257 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 114563283
GI number:
Start: 2514711
End: 2515718
Strand: Direct
Name: Not Available
Synonym: Sfri_2112
Alternate gene names: NA
Gene position: NA
Preceding gene: 114563282
Following gene: 114563284
Centisome position: NA
GC content: NA
Gene sequence:
>1008_bases ATGACATCTAAAAAGACGATTCAACTTAGCCACGGTGGTGGCGGTAAAGAAATGGATCAATTGATCCACGATTTGTTTTT TAAAGCCTTTGATAATCCTATTTTAACTTCGCAAGAAGACGCGGCCAAACTGAATATGTGTGGCCATATTGCTTTTACCA CCGACTCTTTTACCGTTTCACCGTTATTTTTCGCTGGTGGCGATATCGGTAAACTCGCGATTGCAGGCACAGTAAACGAT TTAGCCATGATGGCTGCACAACCCGAATATTTAAGCTGTAGTTTTATTATTGAAGAAGGTTTTCCACTGGATGACTTAAC CACTATTGTAAATAGCATGGCAGCTGAATTACACAAATCAGGCGCGCGGATAGTTTGCGGCGACACTAAAGTGGTGCCCA AAGGCTGTGCTGATGGGCTATTTATTAATACCTCTGGTGTAGGGCGTATTTTGCATCCTGATATTTCAGTGCGTAATTTA CAAGTAGGTGATGCCATTATTGTCTCTCGTGACATTGGTTGTCATGGGGCGGCAATTTTAATGGCCCGTGATGGCTTAAC GCTGGAATCTGAGTTACGCAGTGACTGCGATACGCTATGGCCGATTATTGAACAACTGCTGGTGGCAAATATCGATATTC ATGCCATGCGAGATGCGACCCGCGGTGGCTTATCTGCAGTACTCAATGAGTGGGCGAAAGCATCGAACATTGGCATTGAT GTCGAAGAAGCCAGCATTCCAATTTGTGATGAAGTAAAAGGCTTATGTGAGTTATTTGGCTTTGAGCCTTTTGATTTAGC CAATGAAGGCACCTTTATTATGGCATTGCCTATGGATTTAGCCGAAGGTGCAATTGAGGTGATGCAGCGCTATGGACATT GTGAACACGCAGCAATTATTGGCCACGTTACTGAGCGTCACCCTGGCAAAGTGGTGCTACAAACGCCTTGGGGCAGCAGT CGCTATTTAGATTTACCACAAGGTGAATTATTACCAAGGATTTGTTAA
Upstream 100 bases:
>100_bases GTGTTTGGCAGAGGTTGCTCACCACAAACACCGCTAGGCAGCTGCATGGTTAGCTCAGAAGGCGCGTGTAATGCTTATTA CCGCTATGGAGAAGTTAATC
Downstream 100 bases:
>100_bases TGCACGAATACTCGATTGTAATGTCATTAATGGAACAATGTGAAGCGCTTGCACAGCTGCATAAAGCCACACGAATTGAG CAAGTTGAACTGAAAATTGG
Product: hydrogenase expression/formation protein HypE
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>335_residues MTSKKTIQLSHGGGGKEMDQLIHDLFFKAFDNPILTSQEDAAKLNMCGHIAFTTDSFTVSPLFFAGGDIGKLAIAGTVND LAMMAAQPEYLSCSFIIEEGFPLDDLTTIVNSMAAELHKSGARIVCGDTKVVPKGCADGLFINTSGVGRILHPDISVRNL QVGDAIIVSRDIGCHGAAILMARDGLTLESELRSDCDTLWPIIEQLLVANIDIHAMRDATRGGLSAVLNEWAKASNIGID VEEASIPICDEVKGLCELFGFEPFDLANEGTFIMALPMDLAEGAIEVMQRYGHCEHAAIIGHVTERHPGKVVLQTPWGSS RYLDLPQGELLPRIC
Sequences:
NA
Specific function: NA
COG id: COG0309
COG function: function code O; Hydrogenase maturation factor
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA