Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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The map label for this gene is Not Available

Identifier: 114563279

GI number:

Start: 2509925

End: 2512336

Strand: Direct

Name: Not Available

Synonym: Sfri_2108

Alternate gene names: NA

Gene position: NA

Preceding gene: 114563278

Following gene: 114563280

Centisome position: NA

GC content: NA

Gene sequence:

>2412_bases
ATGAAACCATTACAGCAAGTTACCATTATTGTTAAAGGTATTGTGCAAGGGGTTGGTTTTCGCCCCTTTGTTTTTCGTTT
GGCACATCAGTTAACTTTACTCGGTAGCGTGCTAAATAATCACCTTGGGGTGACGATTGTTTTACAAGGTAATAGCGAAC
TGATTGAACAGTTTATCGATAAATTAGCTAAATCTCCGCCGCCATTAGCGCGCATTGATGCCATTGAGGTTACTCATCAA
GCTCAATTAAGTTTATTTGACCAATTTAGTATTATTGATAGCCATGCCGCTACTGACGAACATGCAAATGTGGCTATTTC
GGCCGACATGAGTATTTGCCGAGATTGTCTTAACGACATTAATGACCCTCAAAACCGCCACTATCAATACCCATTTACCA
ATTGCACCAATTGCGGTCCGCGCTACACCATTATCAACACCCTGCCTTATGACCGATGCAACACTGCCATGGCTGATTTT
GAAATGTGCGATGATTGCCACGCCGCTTATATCAATCCAATGAATCGACGCTACCATGCACAACCAGTGAGTTGCCCACA
TTGTGGTCCACAATTAACCTTTAGCGTTATCAATGCTCGTGCTGAATGTCTTTATGATTCATCGATGTTGATGGCATTAG
AGCAAGCCGTCGAAATGATAAACCGTGGTGGCATAGTGGCCATTAAAGGTTTAGGCGGTTTTCATTTAGTGTGTGATGCC
ACCAATAACGACGCGGTTGCAGCTCTGCGTCAACGTAAACAACGCCTCGCCAAGCCATTAGCGATAATGGTGACTAACTT
GGCCCAGGCGAAATTATGTGTCAGCGGTACTGAAACGGAATGGCAAGTATTAACCAGCCCTGAGAAGCCGATTACCTTGA
TGACCAAACGTGTTGCTAGTGTTGATGGTAAAGATAATGGTAGAGATAATTGCGGAAATATTCACCCTATCGCACTGAGT
CCATTGCTAGCGCCGGGTATTGATCGCCTTGGAGTATTTTTACCCTACACACCATTACATCATTTATTGATGCAGCGATT
ACACAAACCCATTGTGGCTACCAGTGCCAATCGCAGCGGAGAACCCATTATTGCTAATCAAGCTGAGATTGAGCAGCATT
TAAGCCATGTAGTTGATGGGATCCTCGGCCATAATAGGCCGATTATTAATGCCTGTGATGACAGCGTGGTACAAGTGATT
GACGGGCAGCTACAAGTCATTCGATTAGCTCGTGGTTATGCGCCGCTAACCATTAATTTGCACTCACCGATGCTATCAAA
CAGTAAAAATAGCGTGTTGGCTGTTGGCGCACAACAGAAAAATACGGTCGCATTCGGTTTTGCCGATAATCTGATCGTAT
CACCGCACATTGGTGATTTATTCACTCTAGAAACAGAGCAATATTTTAGCCGAAGCTTAGCAACATTTAAGCGTTTGTAT
GACTTTAGCCCAAGTCATATTGTGCATGATAATCACCCGCAATATGCGCCGACACAATGGGCAGTAAACTACCAATCTGA
ACATCGCCTTTTGCCATCTCATTGCATTGGCATACAACACCACTTCGCCCATGTTTTGTCTGTTATGGCGATGCACCAAC
GCACTGAGCAAGTATTAGGATTCAGTTTTGATGGCACAGGCCTAGGTGATGACGGCACATTATGGGGCAGCGAAGTAATG
CTGGCTGATGTGCACGGTTTTACCACGGTGGCCCACTTTAGTTCGTTTAAGTTAATTGGTGGTGAGCAAGCGATTAAACA
CCCAGTTAGAATTCTGCTGGCATTATTGTTTGAACAAATGTCGCTTGAACAAGTACTTTCACTCCCCATTGCCGCTATCG
CCGACTTAGGCAGCAAAACTGTCACTAATTTGTATCAGCTGTGGCGTAACAATAGCCATTGTATTGAATGTCGATCTGTT
GGGCGTTTATTTGATGCTCTTGCTGTAGCGTTAGGTTTTATTGCTAGCTCGCAGTACGAAGGTCAAGCGGGCATGATGAT
TGAAACAGCAGCCAATGCCTATTATACCGAATCAAATATTGAGCCTTTATCTGTAACGCTCAACACCTTATACGACCAAG
AGTCGTTACCTATTCAATGGCACAGTAGCGACTTTATTACTCAATTGGTTAACTGCGCGGTGGAATACTCACATAACCCT
TTAATTAAAAAACAAATATGTTGGCATTTTATCAATATGATTAGTCAGCAATTGGATAGAGTTGGTCAACAATATCCCCA
ATTACCACAGGTATTTTGTGGTGGTGTATTTCAAAACAAAACCTTACTCAGCCAGTGTATTGATGATTGTAAACGTGGCC
AACGGCAAATTTTACCCAGTGGCCATATTCCCATTAATGACGGTGGTATTGCATTAGGCCAATTGTGGTATGGCATACAT
CACATGGCGTAA

Upstream 100 bases:

>100_bases
AATATCGCAATTGGTGGGCTATATCTCAAACAAAGACGTAGATAAAAGGTATCTTAAAGTATATCAGTTATTGCTTATCC
TTGTATGAGATTGAGTCCTT

Downstream 100 bases:

>100_bases
GTGTATCGAGTACTCTTAACTTCTTAACCAATGTAAGTAACTTAAGTAACTTACATTGGTTAAGTTGCTTTAATATATGC
ATTTTTTATCGTAATTGGGC

Product: (NiFe) hydrogenase maturation protein HypF

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>803_residues
MKPLQQVTIIVKGIVQGVGFRPFVFRLAHQLTLLGSVLNNHLGVTIVLQGNSELIEQFIDKLAKSPPPLARIDAIEVTHQ
AQLSLFDQFSIIDSHAATDEHANVAISADMSICRDCLNDINDPQNRHYQYPFTNCTNCGPRYTIINTLPYDRCNTAMADF
EMCDDCHAAYINPMNRRYHAQPVSCPHCGPQLTFSVINARAECLYDSSMLMALEQAVEMINRGGIVAIKGLGGFHLVCDA
TNNDAVAALRQRKQRLAKPLAIMVTNLAQAKLCVSGTETEWQVLTSPEKPITLMTKRVASVDGKDNGRDNCGNIHPIALS
PLLAPGIDRLGVFLPYTPLHHLLMQRLHKPIVATSANRSGEPIIANQAEIEQHLSHVVDGILGHNRPIINACDDSVVQVI
DGQLQVIRLARGYAPLTINLHSPMLSNSKNSVLAVGAQQKNTVAFGFADNLIVSPHIGDLFTLETEQYFSRSLATFKRLY
DFSPSHIVHDNHPQYAPTQWAVNYQSEHRLLPSHCIGIQHHFAHVLSVMAMHQRTEQVLGFSFDGTGLGDDGTLWGSEVM
LADVHGFTTVAHFSSFKLIGGEQAIKHPVRILLALLFEQMSLEQVLSLPIAAIADLGSKTVTNLYQLWRNNSHCIECRSV
GRLFDALAVALGFIASSQYEGQAGMMIETAANAYYTESNIEPLSVTLNTLYDQESLPIQWHSSDFITQLVNCAVEYSHNP
LIKKQICWHFINMISQQLDRVGQQYPQLPQVFCGGVFQNKTLLSQCIDDCKRGQRQILPSGHIPINDGGIALGQLWYGIH
HMA

Sequences:
NA

Specific function: NA

COG id: COG0068

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA