Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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The map label for this gene is Not Available

Identifier: 114563249

GI number:

Start: 2466343

End: 2468583

Strand: Direct

Name: Not Available

Synonym: Sfri_2078

Alternate gene names: NA

Gene position: NA

Preceding gene: 114563248

Following gene: 114563250

Centisome position: NA

GC content: NA

Gene sequence:

>2241_bases
ATGAATAGAAAAATCGAATTATTGGCACCCGGTGGAGATGTCGATGCGATCAAAGCTGCGATAATAGCCGGTGCAAACGC
CGTTTATTGTGGCTTAGATACCTTCAACGCCCGTAACCGTGCAGCAAACCTATCATTCGATGACTTAATTGGTGTTATCG
CGCTTGCACATCAATATCAGTGTGAAGTGTTTCTTACTATGAACATCGTTATTTTAGAAAACGAAGTTCCGACATTGGTT
AAATTGCTCAATCAGCTTGTGAATACGGGTATCGACGGTATTATCGTCCAGGATTTAGGCCTGTTTAATCTAGTGACTAA
ACATTTTCCAAGCCTAGCAATTCATGCCTCAACCCAGCTGACAACTCATAACGAAGGTCAAATTGGCTTCTTAGCCAAAA
TCGGCGCCACTCGAGTCAATTTATCTCGTGAGCTAAACCTTGGCGAAATTAAAAGCCTCACCACCCTCGCCCACGATCAC
GAAGTGCTTACCGAAGTTTTTGTTCACGGTGCATTATGTATCGCCTTCTCTGGTCAATGTTATTCAAGCTCAGTGAGTGT
TGGTAATTCTGGCAACCGTGGCCGTTGTAGCCAGGCATGTCGTGACGAATATGAAGTCACAGCTGCGGGCAACAAATTTC
CGCTGAATCTAAAAGACAACTCAGCTTACTTTGATTTACCAGAATTGGTTGATGCCGGTGTTGACTCACTCAAAATTGAA
GGCCGCATTAAAGGTGCACAATATGTGCATACCGTGGTGGATAGCTGGCGTAAACAGATCGACAAATTTATCGAAACTGG
CAAGCTATTAGCCGATGACTCGAACTTACATAAAGTATTCAACCGTGATTTTACCAACTCGTTTTTAAAGGGTAACCTCA
CCAAAGACATGTTTATCGACAATCCACGCGATAACAGCTTTAAACATGCTAACGATAAAAGTAACGCGATATCAGTGGTT
CAAATTCAAGAAGCGCAACAAACACTGTCGTCAGAAAAAGACGCCATTGTGCAACTGGTTGCCGAAAAAATTAATCACCT
GAGCATTGCCAAGCCAACGTTAGCACTGGCATTTTCAGGTCAAGTTGATCAACCATTGTCGATCACGGTGACCACGCCAG
ACCAACACTTTGTGATTGAATCATCTATCTCTCTAACCCAAGCGACAGAATCGCGGGTTGATGAAGCGGCCATTGAGAAA
CGCTTTAAAAGCTTAAAAGGCAGTGGTTACTTGTTACAAGCGTTTAATTATGACGGCTTGCAGGCTGATTTAAGCCTACC
ATTTAGTCAGTTAACTCAGCTTAAAAACCAACTGTTATTACAGCTAACACAAAGAGAATACATAGGTGCAGTAACCTTAC
CCAAGTTACCTAAGCATCCTAAAGTAACAGAAACACCGACATTATCTTTGCTTATTAGTGATGAAAAAGACGTCAACTTA
TGTGATGTTACCGATGCCGACATCTACTTTAAGCTGCCTGAAAGCTTTAAGAAAAACGACAACAAGTATATTGATATCTT
TTTACGCAACCCAAGATTAATCCCGTGGTTTCCGGCTGTGCTTATTGGCAAAGATTACATCGAAGCAGTAAGAGTGTTAG
AAGTGGTTAAGCCTAAGCGAATTGTTACTAACAATACCGGCGTCGCGTTTAAAGCTTATGAAATGGACATTGAGTGGATC
GCAGGCCCGTTTTTAAACACCACTAACTCTTATGCCTTGCTGACATTACAAGAGCAATTGAATTGTGCTGGTGCGTTTAT
TTCGAACGAGATTAATCGTAATCAAATTAAAAACATCGCCAGGCCGGAAAACTTCAAACTGCTTTACAGCATCTATCACC
CAATTTTGATGATGACCAGCAGACAATGCTTTTTCCAACAAACGGTAGGCTGTAATAAGCCCAGCATTGAAGACGGTTGC
ATGCTCAAGTGTGAAAAAGCCACTACCATCACTAATGTGAAAGGTATTTCGTTTGCAGTAGACAAACAAAAAGGCGGTTA
CCCGAGCATCTATAACCACGAGCAGTTTTTAAACATCGAAGCTGTTGAAGATTTATCACACTTATTCGATGAGTTCTTTA
TCGATCTCACCAACATAGGATCTGGCTCAAAAGCCGAAATAGATAAAACTCAGCTGGTAACCCACTTCGAAAATGTCCTT
AAAGGCGTTAGCGAATCGAAACTAGAGTTAAATCAACTGGTGACCATTTCGACTAATGCCCAGTATCAGCAAGGTTTATA
A

Upstream 100 bases:

>100_bases
ATTTATATTCATAAAGCCTAATCAATAGTAATCCGTTGCAGATACACGTAAAATCTACGCCTAAAATTAATAACTAACGA
CATAAAATAGCGAAAATATC

Downstream 100 bases:

>100_bases
TAACGCTGGATAATGACTCGCTCGACATAGAGTGTGATGGTTAACTTATGACTCAATTAATTTATCAGTTATTGATTATC
AATGATCGATTGTGATAATA

Product: peptidase U32

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>746_residues
MNRKIELLAPGGDVDAIKAAIIAGANAVYCGLDTFNARNRAANLSFDDLIGVIALAHQYQCEVFLTMNIVILENEVPTLV
KLLNQLVNTGIDGIIVQDLGLFNLVTKHFPSLAIHASTQLTTHNEGQIGFLAKIGATRVNLSRELNLGEIKSLTTLAHDH
EVLTEVFVHGALCIAFSGQCYSSSVSVGNSGNRGRCSQACRDEYEVTAAGNKFPLNLKDNSAYFDLPELVDAGVDSLKIE
GRIKGAQYVHTVVDSWRKQIDKFIETGKLLADDSNLHKVFNRDFTNSFLKGNLTKDMFIDNPRDNSFKHANDKSNAISVV
QIQEAQQTLSSEKDAIVQLVAEKINHLSIAKPTLALAFSGQVDQPLSITVTTPDQHFVIESSISLTQATESRVDEAAIEK
RFKSLKGSGYLLQAFNYDGLQADLSLPFSQLTQLKNQLLLQLTQREYIGAVTLPKLPKHPKVTETPTLSLLISDEKDVNL
CDVTDADIYFKLPESFKKNDNKYIDIFLRNPRLIPWFPAVLIGKDYIEAVRVLEVVKPKRIVTNNTGVAFKAYEMDIEWI
AGPFLNTTNSYALLTLQEQLNCAGAFISNEINRNQIKNIARPENFKLLYSIYHPILMMTSRQCFFQQTVGCNKPSIEDGC
MLKCEKATTITNVKGISFAVDKQKGGYPSIYNHEQFLNIEAVEDLSHLFDEFFIDLTNIGSGSKAEIDKTQLVTHFENVL
KGVSESKLELNQLVTISTNAQYQQGL

Sequences:
NA

Specific function: NA

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA