Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114563211

GI number:

Start: 2417088

End: 2419535

Strand: Direct

Name: Not Available

Synonym: Sfri_2040

Alternate gene names: NA

Gene position: NA

Preceding gene: 114563208

Following gene: 114563212

Centisome position: NA

GC content: NA

Gene sequence:

>2448_bases
ATGAATAATAAATCAACATGTTTTAAGCAATCTTTACTCGCATTTGCGATTATGGGTGTAATAAGTTCAGCAGCAAATGC
TGAAGACGCAAAACAAAAACCACAAAAAAATGCTGACGATATAGAAAGAATTGTCGTAACAGCATCTAAACGTGCCAAAG
GATTACAGGAATCACCTGTTGCCATTACGGTAGTAAGTAGCAAAGCAATAGAACAAGCTAAAGTAATGGATATAACAGAT
TTACAAACCCTCGTTCCGACGCTACGCGTCACCCCATTACAACGCTCTACTAACACTAACTTCTCTATTCGTGGCTTTGG
TAATGGCACTAACAATACGGGTATTGAGCCTTCTGTTGGGGTATTTATCGATGGTGTGTATCGCTCCCGAGCGGCCTCTC
AAATAGGTGATTTACCAAGGCTGCAGCAAATTGAAGTCTTAAGTGGCCCGCAAAGTACCTTATTTGGTAAAAATGCTTCC
GCTGGGGTCATTAGCGTTACCACTCGAGAACCGGCTTATTATCAAGAAGGCAAGATTGAAGTTGGCGTAGGCAATTTCAA
CCAAAAAGAAATTAAAGGTTATTACACCAATGGTATAACGGATAATTTGGCATTCAGTGTTTCAGGTGGTGTAAACACCC
GTGATGGTTTTACTGAAAGTGTAGTGGGATTAGACGATATTAACGACCGTGACCGTTGGAATATTCGAGGTCAGGCACTG
TACGAGCCAACTGAAGATGTAAAACTTCGCTTAATTGCAGACTATAGCAAAATTGAAGAAGCCTGTTGTTCTGTCGAAAA
CTCAATTAATGGCCCTACTACCGCTGCAGTTCGTGCGCTCGGTGGTATGGATCTTGATGAAACCGGATCATTTGCTTATC
AATCTACCCTTAACTCAGATCCAGACAATAATGTAAAAGACAGTGGTGTATCACTGCAACTTGATGTTGATTTTGATGGT
TATTCATTTACATCCATCAGTGCACTTCGTACCAATGATTCTGATTTTATGAATGATGTCGATTACACCTCTCTCGATAT
ATTAAATGAAGGCGGTTACACCGATATCGAAACGATTACTCAAGAGTTTCGTTTAACGTCTACCGGAGATCGTCAGCTAG
AATGGATGTTTGGCGCCTTCGTTTTTCATGAAGAGGTCACCACTGGCGATACCTTATATTATGGTAACGACATTAGAAAT
TACTTTGATGTATTGATGGCTGCTGGTGGCGCTCCAGGTTTATTAGCCGGAGTAGAAGGTGCTTATGGCTTAGATCCCGG
TACATTTTTCTCAGGTGATTCGGCCGTAAGTTCTGAGTTTGAACAAGAAAATGATGCTTACTCGATCTTTGCCAGCTTTG
ATTACCATATCAACGACGATTTTACCGCGATATTTGGTGTGAGTTACACCAACGATCAAAAAGAAATCAACATTAGCCAA
CAACATTCCGATGTACTTTCAGCGCTTGATTTAGCCACAGTGCCAACATTATATGGTGTGCCGATTGGCAGTATTCCTCA
GCTTGCACCTGCTGTACCGGTTATTGAAAGTTTACAGTTTTTACCGCCTATGTTGGGATTGCCTAATGCTGTAGAAAACA
ATAAGTCTGATGACAGTAAAACCACTTGGTCGCTGCGCTTATCGTACGAAATCACCGACAATGTCAATATTTTCGCTACT
GCAGCTACAGGTTTTAAAGCCACGTCTTGGAATTTATCGCGTTATTCAAGTCCTTTCGCATCAGATCAATCAGCATTAGA
AACAGCAGGCATAGCACTTCCCAATCAGGTTTATGGTGGCCGATATGCCTCTCCCGAAGAAGCGCTGGTGTATGAGTTGG
GTATTAAAACTCAATTTGAACATGGATCATTTAGCGCAACGATATTTGATCAAACCATTGAAGGGTTTCAGTCATCTATT
TTCATTGGCACGGGCTATGTTCTTGCCAATGCGGGTAAACAAAGTACTCAAGGCCTTGAGTTCGACTCTAACTATAACCT
CACTGAAGATTGGTCATTTACCTTAGCAGGTACCTTCCTTGACCCTGTATACGACTCATTTGTTGGCGCATCGGGTTTAG
ACGGTCCAGTTGATTTATCTGGTGAAAAACCTGCCGGTATCCATGAAGTGAGTATCACTGCTGGTATCGTGTATAACTTT
GAAGTGTTTAACGGTGCAGATGGTTACATTCGTACCGATTACCTTTTCGAGAGTGATACTAAACTGGCTGAAAATACTCC
TGAATCATTATCTCGCGAGGTAAACACCTTTAACGCAAGTACAGGACTAGCGTTTGATAATGGCGTTAGTTTACAGCTTT
GGGTGCGTAACTTAACCAACGATGAGTATCTGTTGTCGGCATTTCCACCTCCAATTCAAGCGGGCAGCTTTAATGGTTAT
CCAAATCAACCTCGGACCTTTGGAGCCAATATTTCGTACCAGTTTTAA

Upstream 100 bases:

>100_bases
AAATTACGAACAAGAACGCTTAAGCGTCATGCATATCTTTTGTAAATCAATGTATTGGCAAGCTTGTTTAATAACGATTA
GTCATCGTCTGGGGAAATAA

Downstream 100 bases:

>100_bases
TTAACCAAACAGTCTGCAGGGCAATAATAACGCTCTACTGCCACTGCAGACCTTATTTATTAACACCAAAAACAACTAAC
TGATTTAAATCGTTAATAGC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>815_residues
MNNKSTCFKQSLLAFAIMGVISSAANAEDAKQKPQKNADDIERIVVTASKRAKGLQESPVAITVVSSKAIEQAKVMDITD
LQTLVPTLRVTPLQRSTNTNFSIRGFGNGTNNTGIEPSVGVFIDGVYRSRAASQIGDLPRLQQIEVLSGPQSTLFGKNAS
AGVISVTTREPAYYQEGKIEVGVGNFNQKEIKGYYTNGITDNLAFSVSGGVNTRDGFTESVVGLDDINDRDRWNIRGQAL
YEPTEDVKLRLIADYSKIEEACCSVENSINGPTTAAVRALGGMDLDETGSFAYQSTLNSDPDNNVKDSGVSLQLDVDFDG
YSFTSISALRTNDSDFMNDVDYTSLDILNEGGYTDIETITQEFRLTSTGDRQLEWMFGAFVFHEEVTTGDTLYYGNDIRN
YFDVLMAAGGAPGLLAGVEGAYGLDPGTFFSGDSAVSSEFEQENDAYSIFASFDYHINDDFTAIFGVSYTNDQKEINISQ
QHSDVLSALDLATVPTLYGVPIGSIPQLAPAVPVIESLQFLPPMLGLPNAVENNKSDDSKTTWSLRLSYEITDNVNIFAT
AATGFKATSWNLSRYSSPFASDQSALETAGIALPNQVYGGRYASPEEALVYELGIKTQFEHGSFSATIFDQTIEGFQSSI
FIGTGYVLANAGKQSTQGLEFDSNYNLTEDWSFTLAGTFLDPVYDSFVGASGLDGPVDLSGEKPAGIHEVSITAGIVYNF
EVFNGADGYIRTDYLFESDTKLAENTPESLSREVNTFNASTGLAFDNGVSLQLWVRNLTNDEYLLSAFPPPIQAGSFNGY
PNQPRTFGANISYQF

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA