Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114563170

GI number:

Start: 2371517

End: 2373799

Strand: Direct

Name: Not Available

Synonym: Sfri_1999

Alternate gene names: NA

Gene position: NA

Preceding gene: 114563169

Following gene: 114563171

Centisome position: NA

GC content: NA

Gene sequence:

>2283_bases
ATGATTGAGTTAAATCGACGTCATTTTTTAAAGGGAGCGGGTGCCAGTGGTGCCACATGTGCTTTAGCAAGCATGCTTCC
TGGTTCGCTAGCAGCGTTAGAAAAGTCACCATTAAAAGGTGTTGCTTCTGAAGTTGCCAGTATTTGTGAAATGTGTTCAA
CGCGGTGTCCTATTAAGGCACGCATTGTAGATGGCAAAAACGTATTTATTACGGGTAATAAAGAAGCAAAATCGTTTGGT
GGCAAAGTCTGCGCCCGAGGTGGAGCTGGCCATAGCTTACTTTACGATCCACAGCGTATCGTTAATCCACTTAAGCGTGT
GGGTGAACGCGGCGCAGGTGAATGGGCTGAGATTTCATGGGCTGATGCTTATAAAGAAATCGCCACCAAAATGAACCAAA
TAAAACAACAATATGGTGCAGAAACCATAGCGTTCTCTTCAAAGTCTGGTTCACTTTCAGGTCATATATTTCATCTTGCT
GAGGCTTTTGGATCGCCCAATACATTTACTCATGCCTCAACGTGCCCGGGCAGTTATGTTGTTGCTGCTAAGGCAATATT
TGGCACCAAAATGAAGCGTGATTTGAGCAATGCCAAATACATCATCAACTTTGGGCATAACTTGTATGAAGGCATCAATA
TGTCTGAAACAAGAGGCTTGATGCAAGCTCAAATGGATAGAGGAGCCAAGTTAGTCGTATTTGAACCTAGATTCTCAATT
GTGGCAGATAAGGCTGATGAGTGGCATGCAATACGTCCGGGTACCGACGTCGCGGTCGCGTTAGCGTTATGTCATGTGTT
GATTAATGACAATTTATATGACCATGACTTCATTGAAAAATATGTTGTTGGTTTTGATGAGTTCGCCGCTGAAGTACAAA
AATATACCCCAGAATGGGCCGAAACTATTTCAGATGTGTCTGCCACTGCCATTCGACGTATTGCACATGAATACGCAAGC
CACGCTCCACACGCCGTTGTTGATTTTGGCCACAGGGCAACCTTTACACCAGAAGAGTTCGACATGCGCCGTGCACTATA
TGCAGCCAACATATTGATTGGCAACATCGAACGAAAAGGGGGCATTTACATGGGCCAGAAAGCACCTGGCTACAATAAAT
TTGCCGGTGAGAATGTGGCCCCAACGCTAGCCAAACCGGGTGTTAAAGGCATGCCTAAGCCAACGGCAATCCGCATTGAC
CAGGTTGAAAAGCAGTATGCAATGATGTGGTCAAATGGTGGCATTTATCAAACCATTTTAGATGCAACATTAGACGCCAA
ACCGTATCAATTAAAAGCATGGGTAATGAGCCGTACTAACCCAATGCAAACCCTTACAGACCGAGCCAAAGTAGAACAAT
CGCTTAAAAAGCTAGATTTAGTGGTGTCATGTGACCTGTATATCAGTGAAACCGCTGCATACGCAGATTATATTTTGCCA
GAATCGACTTATCTTGAACGCGATGAAGAGATACAAGATAAATCAGGTAAAAATCCGGCCTATTATGTTCGTCAACGTGT
GGTTGAAACCATTGGTAATACTCGCCCAAGCTGGCAAATATTTAAAGAATTAGGTCAAGCTTTAGGGCTTGAACAATTTT
ACCCTTGGGACAATATACAAACATTGCAATTAATGCAGCTGAATCGCGATCATAGCTTATTGGAACACATCAAAAAAATG
GGTTACGTCAGCTACGGTAAGCCATTGATGTTGCGTGAACCTGAAATGGTTACCGAATTCGTTAAGGCTTATCCCAATGC
CAAAAGTGTTGATGCAGACGGTACTTATGCAAGCTCAATGAGCTTTAAAACACCCAGCGGCAAGATTGAGTTAACGTCAC
CCAAAATAGAAGGCATGGCTCCAGGTCGAGGTGTGATTAAGCATCGCGATGTACAACTAAAACAAGCTGATGAGTTGTAC
TTTATACAAGGGAAGGTCGCGGTACACACCAATGGCGCCACCCATAATATTCCAATGTTAGCCAATCTTATGTCGAAAAA
TGCGATTTGGATCCATCCAATAACGGCCGGGCGACTCGATATCCATAGCGGTGATGCGATTAGATTAACCAGCAGTGTGG
GCAGTGAGGAAGGCACCGCCTTAGTCACCCCAGGGATTCGTCAAGATACTGTGTTTGCATACATGGGCTTTGGCTCCAAA
AATAAAGAACTGGTGCGAGCCACAGGAAAAGGTATCCATTGCGGCAACCTACTTCCTAATGTCATCGCCCCCATCTGTGG
CATGAATTTACATACCACGGGTGTCAAGTTGGTAAAAATTTAG

Upstream 100 bases:

>100_bases
TAGCGATGATGCTGACTACAGATTGGGTCTGGTTAGTACCATTAATAATAAGTAAACAGAGAAAAACTTCGTGCTTCGTT
GAAGATGAAGGGGGGCAATC

Downstream 100 bases:

>100_bases
CCGGTAACTAATTGATTTGGAGTCTCCTATGAGCAAACGATATGTCATGGTGCATGATGAAAATAAATGCATCGGCTGCC
AAGCTTGCAATATAGCTTGT

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>760_residues
MIELNRRHFLKGAGASGATCALASMLPGSLAALEKSPLKGVASEVASICEMCSTRCPIKARIVDGKNVFITGNKEAKSFG
GKVCARGGAGHSLLYDPQRIVNPLKRVGERGAGEWAEISWADAYKEIATKMNQIKQQYGAETIAFSSKSGSLSGHIFHLA
EAFGSPNTFTHASTCPGSYVVAAKAIFGTKMKRDLSNAKYIINFGHNLYEGINMSETRGLMQAQMDRGAKLVVFEPRFSI
VADKADEWHAIRPGTDVAVALALCHVLINDNLYDHDFIEKYVVGFDEFAAEVQKYTPEWAETISDVSATAIRRIAHEYAS
HAPHAVVDFGHRATFTPEEFDMRRALYAANILIGNIERKGGIYMGQKAPGYNKFAGENVAPTLAKPGVKGMPKPTAIRID
QVEKQYAMMWSNGGIYQTILDATLDAKPYQLKAWVMSRTNPMQTLTDRAKVEQSLKKLDLVVSCDLYISETAAYADYILP
ESTYLERDEEIQDKSGKNPAYYVRQRVVETIGNTRPSWQIFKELGQALGLEQFYPWDNIQTLQLMQLNRDHSLLEHIKKM
GYVSYGKPLMLREPEMVTEFVKAYPNAKSVDADGTYASSMSFKTPSGKIELTSPKIEGMAPGRGVIKHRDVQLKQADELY
FIQGKVAVHTNGATHNIPMLANLMSKNAIWIHPITAGRLDIHSGDAIRLTSSVGSEEGTALVTPGIRQDTVFAYMGFGSK
NKELVRATGKGIHCGNLLPNVIAPICGMNLHTTGVKLVKI

Sequences:
NA

Specific function: NA

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA