Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114563071

GI number:

Start: 2249526

End: 2250488

Strand: Direct

Name: Not Available

Synonym: Sfri_1900

Alternate gene names: NA

Gene position: NA

Preceding gene: 114563070

Following gene: 114563072

Centisome position: NA

GC content: NA

Gene sequence:

>963_bases
ATGGATAGCAAGTCGAATTCAGAACTCGCGCGATTAGAGCAAGCGGCAAGAGCAGCATGGTTATATTACGTCGCCAAGAA
TACTCAAGATGAAATTGCCCAAAAATTAGAAGTATCAAGACAGTCAGCGCAACGTTTAGTCGCATTAGCGGTTAGTGAAG
GGTTAATTAAAGTCCGTTTAGATCACCCCATTGTTAAATGTATGGAGTTGGGCCAACAGTTAACGCAAGCTTTCAATTTA
TTGGAATGCGAAATTGTCCCCAGCGATCCTGCTGACGACAGTTCCGTGCATGGTTTAGCCCAATGTGGCGCAGGTGTATT
AGAGCGGTACTTAAAATCTGAACAGCCTAAAACTCTAGCCTTTGGTACCGGACGAGCACTCAAAGCTTGTATTGATGAGT
TACCTTCGATGCAATGTCCGCAACATAAAATAGTGTCGCTATTAGGCAATATGATGTTAGACGGTTCTGCATCAGCATTT
GATATCGTGGTCAGTATGGCTAATCGAGTGCAGGCTAAACATTACCCTATGCCGTTACCCGTTATTGCTACTTCAGTGGC
GGAAAAGCAGTTATTGCATGACTTAGCGCCGGTAAAAAGTATTTTTGAATTAGTTATACAAGCAGATGCTACTTTTGTTG
GAATAGGGCACATGGGCGCAGAGTCACCATTATTGCTCGATGGTTTCATTAATCAGTCACAGTTAACCGAGTTAATTAAT
GACAATGCCACTGGTGAAATCATCAGTTGGGTGTACAACCAGCAAGGGCAGTTACTCGATCATTCAATAAATGAATTAGT
GATGAGCTCACCGTTGAGGATTGATTCAAATAAGCCTGTTTACGGTATTGCTGCTGGCCAACATAAAGTTGATGCTATAT
TTTCAGCATTGCAAGGTCGCTTAATTAATTCATTGATAACCAATGAATATACAGCCGAAAGAATATTAGCAAAACTAAAA
TGA

Upstream 100 bases:

>100_bases
GTGTCACAAGCTTATCCAGAGATAAATGTACTAAGTCATTGGCGCCATTTTAATCGTCTAATGCCAGCGTTATGCGTTGA
TACTGAATATAAGGGATAAC

Downstream 100 bases:

>100_bases
ATGATTAAATAAACTTATTCTTGGAATTCAAGTTAGATCAATAACAAGTAAATATTCTATAAAAATAATATGAATATAAA
TGGGGTTATTATTTCAACTC

Product: transcriptional regulator, DeoR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>320_residues
MDSKSNSELARLEQAARAAWLYYVAKNTQDEIAQKLEVSRQSAQRLVALAVSEGLIKVRLDHPIVKCMELGQQLTQAFNL
LECEIVPSDPADDSSVHGLAQCGAGVLERYLKSEQPKTLAFGTGRALKACIDELPSMQCPQHKIVSLLGNMMLDGSASAF
DIVVSMANRVQAKHYPMPLPVIATSVAEKQLLHDLAPVKSIFELVIQADATFVGIGHMGAESPLLLDGFINQSQLTELIN
DNATGEIISWVYNQQGQLLDHSINELVMSSPLRIDSNKPVYGIAAGQHKVDAIFSALQGRLINSLITNEYTAERILAKLK

Sequences:
NA

Specific function: NA

COG id: COG2390

COG function: function code K; Transcriptional regulator, contains sigma factor-related N-terminal domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA