Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 114562989

GI number:

Start: 2139852

End: 2141150

Strand: Reverse

Name: Not Available

Synonym: Sfri_1814

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562996

Following gene: 114562988

Centisome position: NA

GC content: NA

Gene sequence:

>1299_bases
ATGACATCAGATAAACAACAACCGACAACATCACACGATACTGATATTCGTCAAACGTTAGGACTCGATAAGTCTAGTGC
AAAGCACAAGTTTGCGGGTAAATGGTTTTGGATTGTTGGGGGAATTGTTATTGTTATCATTGTAGTATGGCAAATATTCA
CTAACGGCCAATCGCAAACTATTCACTATAAAACGGCCAATGCCAACCGTGGATTATTGAGTATAACGGTTACCGCTACT
GGCACGCTCGAACCCGTCAATCAGGTTGAAGTGGGCTCAGAAATTTCTGGCACAATTAAAACGGTACTGGTCGATTTTAA
TGATTACGTTAAAAAGGACCAAGTACTTGCGCGCATGGATACAGATCAATTGCAGGCCAAGGTAAACCAAGCTAAAGCAT
CTCTTGACTGGGCAAAAGCGCAGGTTAAACAAGTTGAAGCGACCATTATCGAAACCAAAAACAGCTTAAGTCGTTCCCGA
GAACTCGCTAAAACGGGCATGTGTTCAGTACAAGAATGTGAAGCATCACAAGCGACATATGATCGCACTGTAGCCAATCT
TGCAAGTGCTAAAGCCCAAGTCGTACAGTCGCAAGCAGCGCTTGATTCAGAGTTAACCACACTAGCAAAAGCCACCATAC
ATTCACCGATTGATGGTATTGTGTTAATTCGTGATGTTGAACCAGGGCAGACCATGGCTGCCTCATTTCAAACACCGGTG
ATGTTTACCTTGGCAGAAAACCTCACTCAAATGGAATTACACGTAGACGTAGATGAAGCCGATGTTGGCCAGATTAGCGT
GGGACAAGAGGCATTGTTTACTGTGGATGCTTATGCCAATCGAAATTTTCCAGCCAAAATTTCTGAGGTTCATTTTGCTT
CTCAAACCGTTGATGGTGTGGTGACCTATGAAACCGTACTAATTGTCGATAATTCAGCCTTATTACTGCGTCCTGGGATG
ACGGCCACCGCGGATATTTTAGTTAAACAAGTATCCGATGCATTGCTGGTTCCCAATGCAGCCTTGCGTTTCAGTCCTCC
AGAACAGGAGCAACAAGCCGCTAGCAGTGGCGGCTTAATGAGTAATTTACTTCCACGACCTCCAAGCAGCTCACAACCTC
AAGAACACGCAGTAAACAGCAACAAAAATCAACAACACATATGGACACTACGCGACGGCCAACCCATTTCCATAGAAGTC
ACCACCGGATCGAGTGATGGAATTAACACTGAAATCACTGCTGGCGACATTGAAACGGGCATGGCATTAATTATCGATAC
CATCAGTAACAAACAGTGA

Upstream 100 bases:

>100_bases
ACACTTAATTTAAATGACACCTCAAGTGTGGCGTGTGCTATCGACTAACTTCACGTTCTCCAGCCTTGTATCGATGCTCA
AATAATGAGAGGCCCATAAT

Downstream 100 bases:

>100_bases
AGGATATGATGCAAAGCCAGCAACCCTCCCTGATTGAGCTCAGGGACGTCACCAAAGTTTATGGCTCAGGACAAGCAGAG
ATGCAGGCCTTGGGCGGAAT

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>432_residues
MTSDKQQPTTSHDTDIRQTLGLDKSSAKHKFAGKWFWIVGGIVIVIIVVWQIFTNGQSQTIHYKTANANRGLLSITVTAT
GTLEPVNQVEVGSEISGTIKTVLVDFNDYVKKDQVLARMDTDQLQAKVNQAKASLDWAKAQVKQVEATIIETKNSLSRSR
ELAKTGMCSVQECEASQATYDRTVANLASAKAQVVQSQAALDSELTTLAKATIHSPIDGIVLIRDVEPGQTMAASFQTPV
MFTLAENLTQMELHVDVDEADVGQISVGQEALFTVDAYANRNFPAKISEVHFASQTVDGVVTYETVLIVDNSALLLRPGM
TATADILVKQVSDALLVPNAALRFSPPEQEQQAASSGGLMSNLLPRPPSSSQPQEHAVNSNKNQQHIWTLRDGQPISIEV
TTGSSDGINTEITAGDIETGMALIIDTISNKQ

Sequences:
NA

Specific function: NA

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA