Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114562902

GI number:

Start: 2034612

End: 2036537

Strand: Direct

Name: Not Available

Synonym: Sfri_1727

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562901

Following gene: 114562903

Centisome position: NA

GC content: NA

Gene sequence:

>1926_bases
TTGAGCTCTACACTTACCCAATCTGTAATCCATGAATTTAGCGATCGCGGCGCGTTAGCCAAACATGTGCATCATTACCA
CCACCGACAAAGTCAGACCGATATGGCCGTCGCGGTAAGTGACGCTATTGCTAAAAAGCATAATCTGATTTTAGAAGCTG
GTACTGGTGTGGGTAAAACCTATGCGTATTTAATTCCGGCCTTACTCAGCGGTAAACAAGTGGTTGTGAGTACTGGCAGT
AAAAACCTGCAAGAGCAGCTATTTCTTAAAGATCTCCCTGCATTACTCGCCATGTTAGATGTACATGTACCTATTGCATT
ATTAAAAGGGCGTAACAATTATTTATGTCAGTTACGCCTAGAAAAACAAATGCAAAATGCCAGTCAATTTAGCGAATATT
ATATTGATGACTTGCTAAAAATTAATCAATGGGCACATTTGAGCAAAGATGGCGATATCGGCAATTTAACCTCGGTGGCA
GAGCATTCAGAAGTTATTCCTAGCGTAGTGAGCACTAAAGAAACCTGTACGGGTAAAAAATGCGATCATTATGATGTGTG
TTTTACCCGTAAAGCACGTATTAGAGCAATGGAGGCCAAAGTGGTGGTGGTTAATCACCATTTATTTTTTGCTGACCGAT
TGCTAAAAGACACCGGATTTGCCGAGTTATTGCCAGATCCCGATGTGGTTATTTTTGATGAAGCCCATTTGGTACCCGAT
ATTTGTATCAATTATTTTGGCAGTCATATATCCAGTCGCGAAATCGATCTGTTACTCAATGGCATCATCAAAATACATAA
ACAGGTTATTCGTGACAGTATTCAAATAGAGCAATTATCGCAACGTGGGCTGGTGGCATTAAGTGATTGGCACAATGCGA
TGTATGACAATCAAGTGTCAGATTGGCGTAAAGTGCTTGCCAATAAGCAATTAGCAACCGTGTCATGGGCATTACAACAA
TCATTAGCAGATCTTGCGAATGTGCTTCGCCATCATCTTGGCCGCGAAGACCTGCTCGATTTAGCGTTTGAACAATTACA
CGAGCTTGCTGAAAAGCTACAAGACTATTTTGAATGCAAAGACATGCAAGCGGCTTATAGTGTCGAGTTAGGCCCACGTT
TTATCATGCTTCGGCTTAGCCCCATTAATGTGGCCAAACAATGCCAGCAGCTGTTTGATGCCAAAACCCGTTGGATTTTT
ACCTCGGCGACCTTGCAAGTAAACCGAAGTTTAGGCCATTTTGCGACCGAGCTTGGCTTATCATCCGCGAAGCAAATTAT
TTTAGACAGTCCGTTTGATTACCCTAATCAAGCGGTATTTTGTGTGCCGCGCCATTTAGGTAAAGTAGGGCAGTCGCAAC
ATACAGTTAAACAATTAGTTGATGTGTGTGTTCAAGCTATCAACGCCGCTCAAGGCCGTACGTTCATATTGTTTACTAGT
CATCAAATGCTCGAACAAGTGGCATCCGCTTTACAAGGTAAAGTCGCTTATCCATTATTGGTACAAGGCCAAGCCAGCAA
ACAAAGTTTATTAAATAAATTTAGACAATTAGGTAATGCAGTGTTGCTCGGCACCAGCAGTTTTTGGGAAGGAGTCGATG
TTCGCGGTAAGTTACTCAGCTGCGTGATTATCGATAAATTGCCGTTTGTATCGCCAGATGATGCTTTATACAAAGCACGG
GCCGCTAATGCTGAACGCCAGGGACTTGATCCCTTTAGCCATATTTCTCTGCCACAAGCGGTGATAAGTTTAAAGCAAGG
AGTCGGGCGGCTAATACGTGATGAAAAAGATCGCGGTGTGCTTATTTTGTGCGATAACCGTATCGTAAATCGTGCTTATG
GACAGGCGTTTATTAATTCGTTGCCACCAATGCAGCGCACACGTGACTTAGACCTAGCATTACAATTTTTAAAACAAATC
CCTTAA

Upstream 100 bases:

>100_bases
TTACAATTTTTGGTGATAAACAGTTGGAACATGAAGCCGTTATAAGCATAATAGCCCAAACCACATTACATCAACGTTAG
CACGATAATTTGAGGATGCT

Downstream 100 bases:

>100_bases
GCTTTTTAAAACCGTGCGCATCAGTTATCATATTGAGTCTATTTGATGTTTTTTTACTGGGTAACCCATCATAATGCCAA
AGCCGTTAACCATTCTCGCT

Product: helicase c2

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>641_residues
MSSTLTQSVIHEFSDRGALAKHVHHYHHRQSQTDMAVAVSDAIAKKHNLILEAGTGVGKTYAYLIPALLSGKQVVVSTGS
KNLQEQLFLKDLPALLAMLDVHVPIALLKGRNNYLCQLRLEKQMQNASQFSEYYIDDLLKINQWAHLSKDGDIGNLTSVA
EHSEVIPSVVSTKETCTGKKCDHYDVCFTRKARIRAMEAKVVVVNHHLFFADRLLKDTGFAELLPDPDVVIFDEAHLVPD
ICINYFGSHISSREIDLLLNGIIKIHKQVIRDSIQIEQLSQRGLVALSDWHNAMYDNQVSDWRKVLANKQLATVSWALQQ
SLADLANVLRHHLGREDLLDLAFEQLHELAEKLQDYFECKDMQAAYSVELGPRFIMLRLSPINVAKQCQQLFDAKTRWIF
TSATLQVNRSLGHFATELGLSSAKQIILDSPFDYPNQAVFCVPRHLGKVGQSQHTVKQLVDVCVQAINAAQGRTFILFTS
HQMLEQVASALQGKVAYPLLVQGQASKQSLLNKFRQLGNAVLLGTSSFWEGVDVRGKLLSCVIIDKLPFVSPDDALYKAR
AANAERQGLDPFSHISLPQAVISLKQGVGRLIRDEKDRGVLILCDNRIVNRAYGQAFINSLPPMQRTRDLDLALQFLKQI
P

Sequences:
NA

Specific function: NA

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA