Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114562851

GI number:

Start: 1978799

End: 1980781

Strand: Direct

Name: Not Available

Synonym: Sfri_1675

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562850

Following gene: 114562852

Centisome position: NA

GC content: NA

Gene sequence:

>1983_bases
ATGAATATATCAGAAGCACAGATTAAGAATTTGAAAGCTGCTGTGGCTGCTGGCCTTAAATCGTTTTATCGTCCACCTAT
GTTGACCTGTAGTGAATACGCAGACACGCATTTTTATATGTCGTCTGAATCGTCTTACACCGAAGGTAAATGGGAAAGCT
TACCGTTTCAAATCGGCATATTGAATGCCATGGGTAACGACCAAATCACCACGCTGAACATTATGAAGTCAGCGCGTGTG
GGTTACACCAAAATGCTGATGGCCAATGCGGGTTACAAGATAGAACACAAAAAACGTAACGTGCTGATATACCAGCCGCG
TGACGGTGCCGCCAAAACGTTCATGAAAAAGCACGTTGAAACGGCCATACGCGACATGCCGATTTGGAAAGCCTTAGCGC
CGTGGATTGGTCGCAAACATAAAGACAGTACCTTAGAAGATAAAATTTTTACCAACGGTAAAACCTTAATGGTGCGTGGT
GGTACCGCCGCGGCTAACTACCGTGAAATATCCACTGATGATGTTATTTACGATGAGTTAGCGGGTTTTGATGAGTCAAT
CGAACACGAAGGTAATGCCACATCGTTAGGTGATACCCGTGTTGAACTGTCGTTGTTTCCTAAATCGATACGGGGTTCAA
CGCCTAAAGTATTAGGTACCTGCCAAATTGAAAAAGCCTGTAGCGAAAGCCAGTACCAATTTAGATTTAACTTACCATGC
CCACATTGTGATGAATTGCAGCATTTAAAGTGGGGCGGCAAAACTGAACCCTTTGGTATTAAGTGGCAAGGTAGCGACCC
AAAAACCGCCTATTACGTGTGCGAGCACTGCGGGTGCTGCATTGAAAACAATCAACTGCACGACATGGAAGAACACCCAA
GCGCTTTATGGATATGCGACAAAACGGGCGTGTACACCACAGACTTTATTTCGTTTTTTGATAAAGACGGCGACGACTTT
TTAACCCCCGAAAATATCTCGATTTATATCTGGTCGGCCTATAACACCCTTAACAGTTGGGCCAAGTTAGTCACTGAGTT
TTACAAAGCTAAAGGCGATAAAGAAAAGTTACAAACCTTTGTTAACACCAAATTGGGCCAGCCGTGGGACAACGACAACG
GCGAACGCATTGAGTGGGAAGACTTAGGCCGCAGGCGTGAAATGTACCCCAACGGCAAAATGCCCGATTGGGTTGTGTAT
GTCACGGCGGGTGTTGATACCCAAGACGACCGATACGAAGGCCGTGTTTGGGGGTGGGGGGCAGGTAAAGAGTGCGCCTT
AATCGATAGGTTTATTTTGTATGGCGACCCAGCCAGCCAAGTGTTGCTGGATAAAGTCGCGCTGCGCTTAAACCAAAGTT
ACCCCCGTAACGACGGCATTGTGTTGAGCATTGGCACAACGTGTTGGGATTCGGGCGGCCATTACTCCGATACCGTTTAC
TCAATGAGTAAAAAGCTGGGTTTGTTCCGCGTGGTACCCATTAAAGGCGCCAATATGTACGGCAAGCCGATTGCCAATTT
CCCGCGTAAGCGAAGCAACAAAGGTGTGTATTTAACCGAGGTGGGTACCGACAACGCCAAAGAGTTGATTATGGCCATGA
TGCGCACTCAACCCAGTGTTGATACGCGTACACCTGGTGCAATTCATTTGCCACTTAACGACAGCATTTGTGATGACACC
GAACTGCAACAGTTAACGTCTGAACGCAAATTGCCGACACGCCGCGACGGTCGCATTGTTTATCGCTGGGAAGCTGGCGG
CAGACGTAACGAAGCGCTGGACTGTTTTGTGTATGCCTTGGCTGCGCTGTATATCGCCATTGATCGCTTTGGCATTAATC
TCGACTCGCTCAGTAAAGTGATAACAACCGACACTCAAAACGAAGCATCAACCGAAACATCCCCACAACCCAAAAAACCG
AAAAAGAGCCAAGCCAATAACTGGCTAAATGGTGGTTCGGCAAAATCAGGAGGCTGGCTGTAA

Upstream 100 bases:

>100_bases
CCCGACATGCCCGAACGCACCATAGACGCTATTCGCGCTGAAGTGATTAAAAGCCAAAACACCGCCGCTGAACTGGCAAA
CGGCATTGAGGATTTATTAG

Downstream 100 bases:

>100_bases
TGTCAAAGCAAGAAGCGGCAGACATGGTCGCACTGTATATCGAAGCCGAAAAAGATGTACTGGCGGGTAAGTCCGTCAGC
ATCAACGGCAAAATGATGAG

Product: phage terminase GpA

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>660_residues
MNISEAQIKNLKAAVAAGLKSFYRPPMLTCSEYADTHFYMSSESSYTEGKWESLPFQIGILNAMGNDQITTLNIMKSARV
GYTKMLMANAGYKIEHKKRNVLIYQPRDGAAKTFMKKHVETAIRDMPIWKALAPWIGRKHKDSTLEDKIFTNGKTLMVRG
GTAAANYREISTDDVIYDELAGFDESIEHEGNATSLGDTRVELSLFPKSIRGSTPKVLGTCQIEKACSESQYQFRFNLPC
PHCDELQHLKWGGKTEPFGIKWQGSDPKTAYYVCEHCGCCIENNQLHDMEEHPSALWICDKTGVYTTDFISFFDKDGDDF
LTPENISIYIWSAYNTLNSWAKLVTEFYKAKGDKEKLQTFVNTKLGQPWDNDNGERIEWEDLGRRREMYPNGKMPDWVVY
VTAGVDTQDDRYEGRVWGWGAGKECALIDRFILYGDPASQVLLDKVALRLNQSYPRNDGIVLSIGTTCWDSGGHYSDTVY
SMSKKLGLFRVVPIKGANMYGKPIANFPRKRSNKGVYLTEVGTDNAKELIMAMMRTQPSVDTRTPGAIHLPLNDSICDDT
ELQQLTSERKLPTRRDGRIVYRWEAGGRRNEALDCFVYALAALYIAIDRFGINLDSLSKVITTDTQNEASTETSPQPKKP
KKSQANNWLNGGSAKSGGWL

Sequences:
NA

Specific function: NA

COG id: COG5525

COG function: function code R; Bacteriophage tail assembly protein

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA