Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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The map label for this gene is sbcB

Identifier: 114562814

GI number:

Start: 1950662

End: 1952083

Strand: Reverse

Name: sbcB

Synonym: Sfri_1638

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562816

Following gene: 114562813

Centisome position: NA

GC content: NA

Gene sequence:

>1422_bases
ATGAAAATAAATCATGAAGAAACCCCATCACTTTACTGGCACGATTATGAAACATTCGGGGCAAACCCAAGCAAAGATCG
TCCGTCTCAGTTTGCGGGTATTCGAACCGATCTAGAACTCAACATTATCGGCGAACCTGAAACCTTTTATTGCAAACTCG
CGCCTGACTATTTACCGTCTCCTGAAGCCATATTAATTACGGGGATAACTCCACAACTGGCCAACCTTAAGGGTGTACCA
GAAGCTGAGTTCATGAAACGTATTAATACGCTGTTTAGCCAACCCAACACCTGCGTTGTGGGCTATAACTCATTACGTTT
TGATGATGAGGTCAGTCGTTATGGTTTCTATCGTAATTTTATCGACCCTTATGGGCGAGAATGGCAAAACGGTAATTCTC
GTTGGGATATCATTGACTTGGTTCGGGCTTGCTATGCATTTCGCCCAGACGGAATTAATTGGCCAAAGAAAGAAGATGGC
TCACCGAGTTTTAAGCTTGAGTTGCTTACCCAGGCGAATGGCTTAAGTCATGAAAAAGCGCATGATGCCATGTCAGATGT
TTATGCCACTATAGCAATGGCTAAATTGATAAAGCAGACACACCCAAAGTTGTACGAATACTATTTTAATTTAAGACGTA
AACAAGCAGTTGCAGACCATATTGATGTCCTAAAGATGCAACCTTTGGTTCATGTCAGTTCAAAGATTAGTGCGTTACAA
GGCTGTACTACATTAATTGCGCCTGTTGCGTATCACCCAACTAATAAAAATGCGGTGATATGCATTAATTTGGCCATGGA
CATCTCACCATTATTAGAACTATCAGCTCAAGAAATCAACGACCGCATGTATACATCGCGTCAAAATTTAGCTGAAAACG
AGCTCGCGATACCACTCAAACAGATCCACCTCAACAAGTGTCCTTTTATCGGTTCGCCAAAATTACTTGACGACGAGGTA
GCTGAAAAATTACAGTTTGATAAAGCATTCGCACGTGAGCAATATAAACGCTTAAAAAACCATCCAGAATTGCGCGAAAA
GCTTAACCAAGTATTTGAACTTGAATCAGATCGTAAAGCGATAACCGATCCTGATTTAATGCTATATAGCGGTGGATTTT
TCAGCCATGCTGATAAAACCAAAATAGACATTATTTGCCATACCGCACCACATAATTTAGCGGCATTAGCATTGCAGTTT
GATGATCCACGGATCAATGAAATGTTATTTCGTTTTCGGGCACGTAATTATCCAGAAACATTAAGCGACAGTGAAGCCCG
TAAATGGCGAGATTTCTGTCAACAACGCTTATCGGATGCCGATTATGTGATTAAACTCGAAAACCTGGTTGAAGAAACCA
GCGAGAATGAACACAAACAAAAGCTATTAAAAGCCCTATATCAATATTTACAGTCGTTATAG

Upstream 100 bases:

>100_bases
CTAAAGCAGCACAAGAAAACCAACTAAATTAGAATGAAAGGTTTAAAGCGGATTTAACCATGATTTACATAAAGTTAAAT
GCAAAAATGAGCAGAATAAA

Downstream 100 bases:

>100_bases
TAAATTTTATTTTTATCCAATTTATTTCATCTAAGGATTAAGGGAATGCAAAATCGTTTTTTAGAGAGCATTACTCAACT
AGACAAGCCTTTGGCCAATG

Product: exonuclease I

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>473_residues
MKINHEETPSLYWHDYETFGANPSKDRPSQFAGIRTDLELNIIGEPETFYCKLAPDYLPSPEAILITGITPQLANLKGVP
EAEFMKRINTLFSQPNTCVVGYNSLRFDDEVSRYGFYRNFIDPYGREWQNGNSRWDIIDLVRACYAFRPDGINWPKKEDG
SPSFKLELLTQANGLSHEKAHDAMSDVYATIAMAKLIKQTHPKLYEYYFNLRRKQAVADHIDVLKMQPLVHVSSKISALQ
GCTTLIAPVAYHPTNKNAVICINLAMDISPLLELSAQEINDRMYTSRQNLAENELAIPLKQIHLNKCPFIGSPKLLDDEV
AEKLQFDKAFAREQYKRLKNHPELREKLNQVFELESDRKAITDPDLMLYSGGFFSHADKTKIDIICHTAPHNLAALALQF
DDPRINEMLFRFRARNYPETLSDSEARKWRDFCQQRLSDADYVIKLENLVEETSENEHKQKLLKALYQYLQSL

Sequences:
NA

Specific function: NA

COG id: COG2925

COG function: function code L; Exonuclease I

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA