Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114562797

GI number:

Start: 1929025

End: 1930215

Strand: Reverse

Name: Not Available

Synonym: Sfri_1621

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562798

Following gene: 114562796

Centisome position: NA

GC content: NA

Gene sequence:

>1191_bases
ATGAGCAAAGACGATAAACTGGCCACCCAAATTGTTAGCGTTGGCCGCGAAAAAAAGTTCACTAAAGGCATTATTAATCC
ACCTGTATTTAGAGCATCTACCGTGGTGTTCGACACCATGGATGAGATGCGTTTTGCGATTAAAAACAAAACCAACGGTG
AAATGTTTTACGGTCGTCGCGGCACCCCAACCCATTTTTCATTTCAACAAGCCATATGTGAACTTGAAGGTGGTGCTGGC
ACTGCGTTATACTCTTCTGGTGCGGGCGCGATCAGTAGCGCTTTGTTGTCATTTTTAAAAAGTGGCGACCATTTATTAAT
GGTCGACACCGCCTATGAACCAACGCGCGATTTATGCAATAAAATGCTGGCAGGTTTTGGTATCGAAACCACCTATTACG
ACCCAATGATTGGCGCAGGCATTCGTGAGTTAATTCGTCCTAACACCAAGGTATTATTTTTAGAATCACCAGGTTCTATC
ACCATGGAAGTTCAAGATGTACCAACGCTTAGCCGTATCGCTCACGAACATGATGTCATTGTAATGCTGGATAATACCTG
GGCATCACCGATTAATTCTCGTCCATTTGATATGGGGGTCGACATCTCTATTCAAGCCGCCACCAAGTACATTGTCGGCC
ATTCAGATGTCATGATGGGTACCGCCACTGCCAATGAACAGCATTGGGAACAACTGCGCGAAAACAGTTACTTAATGGGC
CAAACTACCTCGCCGGATGACGTCTATTTAGCTGCGAGAGGCTTACGTACCCTAGGGGTACGTATGGCACAACATAATAA
AAATGCCTTAAAAGTGGCGAATTGGTTGGTGACTCGTGCAGAAGTGGATCATGTCCGTCATCCAGCATTTGATACTTGCC
CAGGTCACGAGTTTTTTAAACGCGATTTTAGCAGCGGTAACGGTTTGTTCTCATTTGTACTTAAGCAAGGCGACTTAGCG
TCAGTCACAGCTTTTGTTGAAAACATGGACCATTTTAAAATGGGTTTTTCATGGGGCGGTTTCGAAAGCTTAATCTTAGG
GGTATTCGGTATTAACAATATCCGTACTGCTACCCAATGGGACAGCAGTAAACCATTAATACGCTTACACATTGGACTTG
AAGATGCCGACGATTTAATTGCCGATCTCGATGCTGCCTTTAGTCGATATAATGCAATATTACAGAAATAG

Upstream 100 bases:

>100_bases
AATCATTCACCGTAGCGCATTTATCCATGTCATTGATATTTTGCTAATAACATTAGCTAAAACATAAACCGTGGACTCTA
CACATAATGGAAATAAAAAT

Downstream 100 bases:

>100_bases
CCATTACTCATTATTGACGGTAAAATCTGTACACTGTTTCTAAAAAAACGTTTATGGAATGTTCAAACGATAAGGAAATA
AATGAATATCATCAAATTAG

Product: cystathionine beta-lyase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>396_residues
MSKDDKLATQIVSVGREKKFTKGIINPPVFRASTVVFDTMDEMRFAIKNKTNGEMFYGRRGTPTHFSFQQAICELEGGAG
TALYSSGAGAISSALLSFLKSGDHLLMVDTAYEPTRDLCNKMLAGFGIETTYYDPMIGAGIRELIRPNTKVLFLESPGSI
TMEVQDVPTLSRIAHEHDVIVMLDNTWASPINSRPFDMGVDISIQAATKYIVGHSDVMMGTATANEQHWEQLRENSYLMG
QTTSPDDVYLAARGLRTLGVRMAQHNKNALKVANWLVTRAEVDHVRHPAFDTCPGHEFFKRDFSSGNGLFSFVLKQGDLA
SVTAFVENMDHFKMGFSWGGFESLILGVFGINNIRTATQWDSSKPLIRLHIGLEDADDLIADLDAAFSRYNAILQK

Sequences:
NA

Specific function: NA

COG id: COG0626

COG function: function code E; Cystathionine beta-lyases/cystathionine gamma-synthases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA