Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114562782

GI number:

Start: 1911452

End: 1913128

Strand: Direct

Name: Not Available

Synonym: Sfri_1606

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562779

Following gene: 114562784

Centisome position: NA

GC content: NA

Gene sequence:

>1677_bases
ATGATGGCTATAATGACAAATGATAAACCGTGGCTAACACAATATCCTGAGGATGTGCCCACAAAAATAGATTCAAGTAT
GTATAACAATATCAATGATTTGTTTAAAGAGTCTTTTAATGCGCATGCTAAAAAAGCAGCATATATTAATATGGGACATA
GCTTATCCTATCAAGATCTCGAAAGTAAAAGTAACGCTTTTGCTGCTTATCTGCAATCTGAACTAAAAATGAAAAAAGGC
GAACGAATCGCCTTGATGATGCCTAATTTATTGCAATATCCGATCACTATTTTAGGTGCATTAAAAGCAGGACTCATTAT
TGTCAATGTTAATCCACTTTATACCCCTCGAGAATTAAAACACCAATTACGAGACTCAGGGGCCAGTGCTATTGTTGCCG
TAACAAATTTTGGTAATAACCTTCAGCAAATACTGCATGAGACTAACATTAAGCATGTTATGTTAACCAAAATCGGAGAT
GAGTTAGCGATGCATAAGCGCACATTGGTTAACTTTCTTATCAAACATGTCAAAAAAATAGTGCCTAAATATCATATTCC
CGACGCTATTTCATTGCGTAGAGCATTAACCGAAGGCAAGAAACTTCCCTTTATTGATCCCCAAATAACAGTAGATGATT
TAGCATATCTCCAATATACAGGTGGAACGACGGGGCCTGCGAAAGGGGCAATGCTGACTCATAGTAATATTATTTCTAAT
GTTCTACAGGTTCATGCGCATTTTAGCCCAAGAACCTTATATGATAAGGAATATGCCGTAACCCCACTTCCGCTTTATCA
TATTTTTGCCAACTCAGTGAGTATGATGTTTATGCTCTTTCTCGGTGCAACAAATTTACTCATTACCAATCCAAGAGATA
TAGATGGTTTCGTAGCAGATTTAAGTAAATATCCATTCACAATGGTTTTTGGTTTAAATACTCTTTTTAATGGCCTAAAC
AATCATGCTGGTTTTCAAAAATTAGATTTTAGTCACGCTCGTTTTACTATTGCAGGTGGAATGCCGACGCAGAAACATAT
TGCTGATCGTTGGCAACAACTTACTGGAATGCCTGTCATAGAAGGTTATGGCTTAACTGAATGTTCCCCAGTAGTCGCTG
CAGGTACTCATCAACAACAATCATTTATTTCTTCAATTGGTGTCCCTTTACCCAGCACTGAACTACGTATCGTTAATGAT
GAAAATGAACCTTTAGGTCCTAACCAAATTGGTGAAATTCAAATTAGAGGCCCCCAAGTGATGAAAGGCTATTGGCAACA
AGAAGCCGAAACCAATACTGTAATGCATGCAGGAGGGTGGTTAAGTTCTGGCGATATAGGAAGAATGGATGACGATGGAA
TTTTTTATATTGAAGACCGTAAAAAAGATATGATTCTAGTGTCGGGATTTAATGTTTTTCCAACTGAAATTGAAGAAGTT
GCAACCCTTCATCCTCACATCATCGAAGCTGCGGCCATTGGCATTCCCGATGACGCCACAGGAGAAAAAGTTAAATTATT
TATTGTACGCAAAGGTAATGTGACCGTTGGCGAAATAAAAAAACATTGTAGAAAATATCTTACCGGTTATAAAAACCCAA
GGATAATCGAATTTAGAGATGAATTACCAAAATCAAATGTTGGCAAGATCTTACGTCGAGAATTGCGAGATTCATAG

Upstream 100 bases:

>100_bases
GCTAACCCCCTAGAACAGTCGTTAATTCATTGAATTCAAGCTATTATTTTTATACTAATTAGGTGAGTTAATTTACAATA
ATGATGTTTAAACAACATTA

Downstream 100 bases:

>100_bases
GCGTTATTAATGATGTCCTAAGGATAACTAACATATATGGATAGATATGAGGCGCAGCCGAACAAATCCGACGAAACCTC
ATTCACATGCTGACTGAGGT

Product: AMP-dependent synthetase and ligase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>558_residues
MMAIMTNDKPWLTQYPEDVPTKIDSSMYNNINDLFKESFNAHAKKAAYINMGHSLSYQDLESKSNAFAAYLQSELKMKKG
ERIALMMPNLLQYPITILGALKAGLIIVNVNPLYTPRELKHQLRDSGASAIVAVTNFGNNLQQILHETNIKHVMLTKIGD
ELAMHKRTLVNFLIKHVKKIVPKYHIPDAISLRRALTEGKKLPFIDPQITVDDLAYLQYTGGTTGPAKGAMLTHSNIISN
VLQVHAHFSPRTLYDKEYAVTPLPLYHIFANSVSMMFMLFLGATNLLITNPRDIDGFVADLSKYPFTMVFGLNTLFNGLN
NHAGFQKLDFSHARFTIAGGMPTQKHIADRWQQLTGMPVIEGYGLTECSPVVAAGTHQQQSFISSIGVPLPSTELRIVND
ENEPLGPNQIGEIQIRGPQVMKGYWQQEAETNTVMHAGGWLSSGDIGRMDDDGIFYIEDRKKDMILVSGFNVFPTEIEEV
ATLHPHIIEAAAIGIPDDATGEKVKLFIVRKGNVTVGEIKKHCRKYLTGYKNPRIIEFRDELPKSNVGKILRRELRDS

Sequences:
NA

Specific function: NA

COG id: COG0318

COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA