Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 114562767

GI number:

Start: 1894999

End: 1896564

Strand: Direct

Name: Not Available

Synonym: Sfri_1591

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562766

Following gene: 114562772

Centisome position: NA

GC content: NA

Gene sequence:

>1566_bases
ATGACCGCCGCTAAATTTGTTGAGGGTTCTATTTTACGCCATATTTTGGTGATGAGCTCTACTGCTGCAGTGGGTATTTC
GGCGCTGTTTGTGGTCGACTTACTCGATATTTTCTTTTTAAGTCTGCTTGGTGAAATAGAGCTTGCCGCTGCAGCTGGTT
ATGCCAGTACAATTTCATTTTTTACCACATCAATAGGTATTGGTTTATCCATTGCTCTTGGGGCTTTGGTGTCAAAAGCC
GTGGGTTCTAAGAACATAAAGTTAGCTAAGAGATTGTTTTTAAACAGTGCCATAGTGACCTTAATTACCAGTGTGCTGGT
GGCCGCAGTTGTCATCGCGTTTATTCCAGAATTGTTAGCGTTAGTGGGGGCAACTGGGCGCACTGCGGAATTGGCTGAAA
GCTACTTGTATATTCTGGTGCCATCTTTACCGTTTATTTGTTTAGCAATGGCGCTTGGCGGCGCACTGCGCGCTGTGGGT
GATGCCAAACTATCGATGATGTCGACGCTAGCCGGTGGTGGTGTCAATGCCATACTCGATCCTATCTTCATTTTCTCCTT
ATCAATGGGCATTGAAGGGGCGGCGGCCGCATCAGTACTTGCTCGTATAGCCGTGTTCATTATTTCTGCCCGCGGTGTGG
TAGTAAAACATAAATTATTAGGTCGCTTTTCGTTTGATGAGTTTAAGCAAGATTTAGGGGTTATTTTTTCAATTGCCGCG
CCTGCAATGTTAACCAATGTGGCAACCCCAATTGGTAATGCGGTGGTAACCCGTGCCATAGCAGATTTTGGTGATAGTTA
TGTGGCTGGCTGGGCGGTATTAGGGCGTTTAATCCCAGTATCGTTCGGGATGATTTTTGCACTATCTGGCGCTGTTGGGC
CGATTGTGGGTCAAAACTTTGGAGCCAATGAAATTGAGCGTGTCCGATTGAGTTTAACCAAAGCGATTCAATTTTGTGTC
GCTTATGTGTTGATGATGTCTCTTGGGCTGTATCTGTTACGAAATGTCATTATTAGTAGTTTTGATATGAAAGGCGATGC
GGCAGAACTTATTTTGTTTTTCTGTCAGTACATCGCGGTGTTCTTTATCTTTTCGGGCATTTTGTTTATTGCTAACGCCT
CATTTAATAATTTAGGTAAAGCCAAATACTCGACCTTTTTTAATGTGGGTAAAGCAACCATAGGCACCATACCATTTGTG
TATTTTGGCGCGCAGTGGGGCGGTGTATTTGGAGTATTAATTGGTCAGGTGATTGGGGCAATTATATTTGGTGTGATAGG
TATTTTATGTGCATATCGATTAGTCGATAAAATTAGCCGCCAAGGCATGCTAACGGCGGGTGCCAACCAACAACTGCTAG
AAGACGATGCCATCAACATTGATATGGTGGCTGCTCCTTCACCTATGCCTGGGCGCACTCAGATGGCCCAATTAGATGAA
GAGCCGCTGTGTAAACAATTAGCTCAACAAGATAACGCCGATACAGACGATATTGAAAAAGTGGGTGCTAATAACACGAG
TACCGATAAAACCGCTAGTGACAAAAGCACCGAAAAAACCAATTGA

Upstream 100 bases:

>100_bases
ATATTGTAATCATTGTGGTAGCGAGCTTGAAAAACTCTAGGGCAACGGCCCTTAAACCTGAGTGAGGTTTGCTTTTTACT
ATTGACAATCAAGGATACTA

Downstream 100 bases:

>100_bases
TCTGCTGGATGCTCTTTAGATTTAATTCTGTGTAGATGTGATTGAGTGCAGATCTAATTGGATTTAGATTGGGATCTAGG
CGGGATGCTCTGGTCGATAT

Product: MATE efflux family protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>521_residues
MTAAKFVEGSILRHILVMSSTAAVGISALFVVDLLDIFFLSLLGEIELAAAAGYASTISFFTTSIGIGLSIALGALVSKA
VGSKNIKLAKRLFLNSAIVTLITSVLVAAVVIAFIPELLALVGATGRTAELAESYLYILVPSLPFICLAMALGGALRAVG
DAKLSMMSTLAGGGVNAILDPIFIFSLSMGIEGAAAASVLARIAVFIISARGVVVKHKLLGRFSFDEFKQDLGVIFSIAA
PAMLTNVATPIGNAVVTRAIADFGDSYVAGWAVLGRLIPVSFGMIFALSGAVGPIVGQNFGANEIERVRLSLTKAIQFCV
AYVLMMSLGLYLLRNVIISSFDMKGDAAELILFFCQYIAVFFIFSGILFIANASFNNLGKAKYSTFFNVGKATIGTIPFV
YFGAQWGGVFGVLIGQVIGAIIFGVIGILCAYRLVDKISRQGMLTAGANQQLLEDDAINIDMVAAPSPMPGRTQMAQLDE
EPLCKQLAQQDNADTDDIEKVGANNTSTDKTASDKSTEKTN

Sequences:
NA

Specific function: NA

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA