Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114562491

GI number:

Start: 1562246

End: 1565182

Strand: Reverse

Name: Not Available

Synonym: Sfri_1313

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562492

Following gene: 114562490

Centisome position: NA

GC content: NA

Gene sequence:

>2937_bases
ATGAAAACAAGAACATTTAACAAAACCAAGCTTGCGACCAGTTTATCGCTTGTCCTTGGTATGAGCAGTATCTTACCAGC
TCATGCTGCTGATGAAGTCAGTGACGAAAATATCGAAGTTATTTCGGTTACTGGTATTCGTGGCAGTTTAATTAAATCAA
TGGATGTGAAGCGTTCATCAAGTGGAGTCGTTGACTCTATTTCTGCTGAAGATATTGGTAAGTTTCCTGATACTAACTTA
GCTGAATCGTTACAGCGTATTACAGGTGTATCGATTGACCGTTCTAACGGTGAAGGCAGTAAAGTATCAGTGCGTGGTTT
TGGTCCTGATTACAACTTGATCACCCTCAATGGTCGTCAAATGCCCGTCACTACAGGCTCGCGCTCATTTGATTTTGCTA
ACATCGCATCTGAAAGTATCAGCGGTGTAGAAGTTCATAAAACCAGCCAAGCCTCAGATTCTACCGGTGGTATCGGTTCT
ACTATCGATATTTTAACCCACAAGCCATTCAGCTCTCCGGGGTTGAAAGCCACTTTTGGTGTAAAAGCGGTTGATGACCA
ATCAACAGATAATGGCTCAGTAACCCCTGAATTATCTGGTTTGTACTCAAACACGTTTGCAGATGATAAATTTGGTATTT
CACTATCGGCCAGTTACCAAGAGCGTGAAAGTGGTAACCAACAAGCACAGGTTGGCACAGGCTGGCGTAGCTTCCCAGGT
TCTGCTGACAACAGTGATTGGGGCGGAGTGGCTAAAGACAGCACCCAAGTTAATCGTCCTGGTGATAGCGATATTTATTC
CGTTCCGCAAACCACTGTTTATCGTTTTGAAGAACAACAACGTACCCGTACTAACGGCCAGTTAGTATTACAGTACAGCC
CGGTTGATAGTGTAGTCGCAAGCGTAGACTATACCTACATGCGTAACGACATCGACACTCAATCGAATGACGTATCAGCA
TGGTTTAACTTCGTTCCGTCTGAAAACGTATGGTCTGATGGCCCTATCGCCTCACCACTTATTTACTCTGAAACTTATGA
TTCACCTGCTGATTTATCTATGGCTGCTGGTGACTATGGCGTACGTAACGAAAGTGGTTCTTTAGGTTTTAACCTTGAAT
GGCAAGCAACAGATAACTTAAAGCTGACATTTGATGCGCACAACTCGGTTGCTGAAAACAAACCGAATAACCTTTATGGT
TCAAACAACAATTTAAGTACTGCAGCGTTTGTGCGTACCAGCGCGGCAACTGACTTTAGCGGTGACTTACCTGTACTTGC
TGTTGGTGGTGGTAATGCAGTGACACCTGCAGACATGATGCTTACCGGTTCTGTTTTTGGTAACGCACGTAATAAGTCTG
AAATTGATCAATACCAATTTGACGGTGAATACTTATTTGAAGATGCAGGTAGCATCGACTTTGGTGTAGCGCTAACTAAC
GTTAACAACCACTCACAAAGCGTCAACGTTCAGCGTAACGATTGGGGTGGAGTAGGTTCTGCAGGTGACTTTGAAGATGC
ATGGTTCCCAGCTGATACCATTCATGACAAATTTGACGCTAATGGCGGCGATTTCTCTCTGTCAGACGGTAACTTTGACG
TTTTAGATACCATTTTCATGTGGGATTTTGCATCAGTACGTGATTTTGCAGCAGCAAACTATGCTTCTGCAGTAAGCGGT
GATTGTGGTAATGGCTTCTGCCCTTCTACTAATTATGCAGCTGAAACAGATCGTTATACTGAAGAAGAATCACAAGCCGT
TTATGTACAGTACAACTACGATAATGAAATTGCCGGCATGCCATATGATGTGCATTTCGGACTTCGTTATGAGCAAACTG
ATGTCACCTCGACCGCTGCCGTTGCAGGATATAATGGCGCTGACTGGATTGCTGAAACTGAAATTGCATTAGTGGGTACT
GGTGAGCAAGTATTTGAAACCAAAACCGGTGATTACGACTATTTACTACCAAGCTTCAACTTTAATATTGAAGTAGTAGA
AGATGTCATGCTTCGTGCGGCATACAGTGAAACCATTGGTCGTCCTAGCTACACAGATATTCAAGGCGGTACGGTATTAG
CGACGCTTGCCAATCGAAGTAATGGTGGTGGTTCTGCAGGTAACCCTACATTGTTGCCATTAGAATCAGAAAATATCGAC
TTCTCTGCTGAGTGGTATTACGCCCCATCAAGCTATGTGTCTGTTGGATACTTCCGTAAAGACACTAAAAACTTTATCAG
TTCTGAAACAGTTAAAACCACTAACGGCATTTATAACCCAGCATCTGGTGATTTATATAAAGCTGCTGTGGCCGCAACGG
GTACAACCGAAGCAGGGGCTGTTCGTGATTATATTTTCGCAAATTATGCTGATAATGCTGCTGTAGATGTCACGAATCAA
ATTATTAGCGGCAGTGCTGCTAATAATGATGAATTGTTGAACTTTAATATTTCGACGCCATCAAACAGCTCTAATAACTC
AGTCATTGATGGTTGGGAGTTTGCGGCACAACACTTCTTCGGCGAAAGCGGATTTGGTGTAATAGCCAACTACACCTTGG
TTAATAGTGATCAGGCTTACGACAACTTCTCATTTGATGCACAATCAGCATTAATCGGTATTAGTGACACCGCTAACGCG
GTATTCGTGTACGAGAATTATGGTTTCCAAGCCCGTATCGCATACAACTGGCGTGATGAGTTCTTAAACTCTACAGGTCA
AGGTACTGGCGCTAACCCACAGTACACAGAAGCTTACTCGCAAATCGATTTGTCTGTTAGCTATGATGTCGAGTCTGTTG
AAGGCTTAACGGTGTTTTTCGAAGGACTTAACATTACTGAAGAGTACATCCGTGTTCACGGTCGTGCTGACGAGCAAGTG
TTAAACCTAACCGAAACTGGCGCACGTTATAGTTTAGGTGCTCGTTATACTTTCTAA

Upstream 100 bases:

>100_bases
TAAATAATGTTTACCGCGCCGATGGAGAATTAAAAAAAACGATTTGCGCCTAACCCGCAATATTGAGAGAAGTAAAATCT
AGTCAATGGGGATTTCCTAG

Downstream 100 bases:

>100_bases
CCGATAATGCAATAGTCATTGAGTGATATTTCGGCTAACACTCAAGTGTTAGACGGAATTCACTCAAGTACCCTTTCAGG
TCGTTGAGGTGCCAACTTTT

Product: TonB-dependent receptor, plug

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>978_residues
MKTRTFNKTKLATSLSLVLGMSSILPAHAADEVSDENIEVISVTGIRGSLIKSMDVKRSSSGVVDSISAEDIGKFPDTNL
AESLQRITGVSIDRSNGEGSKVSVRGFGPDYNLITLNGRQMPVTTGSRSFDFANIASESISGVEVHKTSQASDSTGGIGS
TIDILTHKPFSSPGLKATFGVKAVDDQSTDNGSVTPELSGLYSNTFADDKFGISLSASYQERESGNQQAQVGTGWRSFPG
SADNSDWGGVAKDSTQVNRPGDSDIYSVPQTTVYRFEEQQRTRTNGQLVLQYSPVDSVVASVDYTYMRNDIDTQSNDVSA
WFNFVPSENVWSDGPIASPLIYSETYDSPADLSMAAGDYGVRNESGSLGFNLEWQATDNLKLTFDAHNSVAENKPNNLYG
SNNNLSTAAFVRTSAATDFSGDLPVLAVGGGNAVTPADMMLTGSVFGNARNKSEIDQYQFDGEYLFEDAGSIDFGVALTN
VNNHSQSVNVQRNDWGGVGSAGDFEDAWFPADTIHDKFDANGGDFSLSDGNFDVLDTIFMWDFASVRDFAAANYASAVSG
DCGNGFCPSTNYAAETDRYTEEESQAVYVQYNYDNEIAGMPYDVHFGLRYEQTDVTSTAAVAGYNGADWIAETEIALVGT
GEQVFETKTGDYDYLLPSFNFNIEVVEDVMLRAAYSETIGRPSYTDIQGGTVLATLANRSNGGGSAGNPTLLPLESENID
FSAEWYYAPSSYVSVGYFRKDTKNFISSETVKTTNGIYNPASGDLYKAAVAATGTTEAGAVRDYIFANYADNAAVDVTNQ
IISGSAANNDELLNFNISTPSNSSNNSVIDGWEFAAQHFFGESGFGVIANYTLVNSDQAYDNFSFDAQSALIGISDTANA
VFVYENYGFQARIAYNWRDEFLNSTGQGTGANPQYTEAYSQIDLSVSYDVESVEGLTVFFEGLNITEEYIRVHGRADEQV
LNLTETGARYSLGARYTF

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA